; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc11g0287541 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0287541
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCMiso1.1chr11:2500534..2501436
RNA-Seq ExpressionCmc11g0287541
SyntenyCmc11g0287541
Gene Ontology termsGO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045720.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.0e-11995.61Show/hide
Query:  MKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITV
        MKLIQLGITASND GQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKK GIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLIT+
Subjt:  MKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITV

Query:  LPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKM
        LP+SMEEFA LVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMT EVCNGFLYGFS+SLESMKMKM
Subjt:  LPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKM

Query:  --KIYHHNILRLGQIPHFPYTPSCIISH
          KIY HNILRLGQIPHFPYTPSCIISH
Subjt:  --KIYHHNILRLGQIPHFPYTPSCIISH

KAA0045730.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.8e-16798Show/hide
Query:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS
        MGGRNQTRSRRSKKPFIRQVWASNFNSEIT+FDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS
Subjt:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA
        DFDFQVD+HSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPHFPYTPSCIISH
        RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRF MTYEVCNGFLYGFSESLES  MKM IYHHNILRLGQIPHFPYTPSCIISH
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPHFPYTPSCIISH

KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]1.5e-8960.14Show/hide
Query:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS
        MG RN+ R RR + P I++VWASNF+ EI + + CL+ + IL+IDTEFPG I  +P  SIDE +Y++ RFNVNQ KLIQLG+TAS++ GQ+ GSWEFNFS
Subjt:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA
        DFD Q+D  +PS+I FLE+NGLDF KLKK GIP++ FT  F  II++  + +WVTFHGLYDIGYL+KAMG+   LP+SMEEFA +V   VG+VRDLK +A
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKI
        R+CEGLE GR+GLERLG++L +KRFGMKH+AGSDSLLTA  H +M + FR+     +G LYG    LE MK+   I
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKI

XP_031736916.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]6.7e-13585.66Show/hide
Query:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS
        MGGRNQTRS R +KP IRQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SID+E+YK+F FNVNQ KLIQLGITAS+D GQIGGSWEFNFS
Subjt:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA
        DFDF+ DAHSP AIPFLE NGLD KK+KK GIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFAT+VVNEVGIVRDLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA

Query:  RFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLES--MKMKMKIYHHNILR
        +FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAH EMV+RF M  +VCNGFLYGFSE+LES  MKMKMKI HHNILR
Subjt:  RFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLES--MKMKMKIYHHNILR

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]5.0e-11468.38Show/hide
Query:  RSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHS
        R +K  I +VWASNF++EI+K +ECL FHTI++IDTEFPGFI  SP  SIDE +Y++FRFNVNQ KLIQLG+TA +D G+IGGSWEFNFSDFD ++DA S
Subjt:  RSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHS

Query:  PSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGR
        PS+  FLE+NGLDF KLKKYGIPI  FT KF+ II+K ++FRWVTFHGLYDIGYLIKAMG+  VLP++MEEFAT+VV  +GIVRDLKHMARFCEGLEDG+
Subjt:  PSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGR

Query:  LGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPH----FPYTPSCI
        LGLERLGK+L++KR+G+KHNAGSDSLLTASAHFEM++RF M  E+C+G+LYGFS  L+SM + M ++H  I+  GQIP+    + Y PS I
Subjt:  LGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPH----FPYTPSCI

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease3.3e-13585.66Show/hide
Query:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS
        MGGRNQTRS R +KP IRQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SID+E+YK+F FNVNQ KLIQLGITAS+D GQIGGSWEFNFS
Subjt:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA
        DFDF+ DAHSP AIPFLE NGLD KK+KK GIPIASFTKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFAT+VVNEVGIVRDLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA

Query:  RFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLES--MKMKMKIYHHNILR
        +FCEGL+D GRLGLERLGK+LN KRFGMKHNAGSDSLLTASAH EMV+RF M  +VCNGFLYGFSE+LES  MKMKMKI HHNILR
Subjt:  RFCEGLED-GRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLES--MKMKMKIYHHNILR

A0A5A7TRF3 Putative CCR4-associated factor 1-like protein 85.1e-12095.61Show/hide
Query:  MKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITV
        MKLIQLGITASND GQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKK GIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLIT+
Subjt:  MKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITV

Query:  LPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKM
        LP+SMEEFA LVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMT EVCNGFLYGFS+SLESMKMKM
Subjt:  LPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKM

Query:  --KIYHHNILRLGQIPHFPYTPSCIISH
          KIY HNILRLGQIPHFPYTPSCIISH
Subjt:  --KIYHHNILRLGQIPHFPYTPSCIISH

A0A5A7TRG1 Poly(A)-specific ribonuclease8.5e-16898Show/hide
Query:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS
        MGGRNQTRSRRSKKPFIRQVWASNFNSEIT+FDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS
Subjt:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA
        DFDFQVD+HSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPHFPYTPSCIISH
        RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRF MTYEVCNGFLYGFSESLES  MKM IYHHNILRLGQIPHFPYTPSCIISH
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPHFPYTPSCIISH

A0A6J1CXP9 Poly(A)-specific ribonuclease8.7e-8856.75Show/hide
Query:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS
        MG   +  SRR     IR+VW+ NF+ E+   ++CL  + ILTIDTEFPGFI  +P  +I+E++Y +FRFNVN+ KLIQLG+TAS++ G IG +WEFNFS
Subjt:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA
        DFD Q+D H+ S++ FL++NGLDF KLK++GIPI  FT K   + +K  I RWVTFHGLYDIGYL+KAMG+   +P+SMEEFA LV   +G V DLKHMA
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPH
        +FCEGLEDG+LGLE+L +++N+KRFG KH+AGSDSLLTAS + +M  +F +  EVC+GFLYG    L +   K+K+Y +  L  GQIP+
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPH

A0A6J1G7L2 Poly(A)-specific ribonuclease2.7e-8960.74Show/hide
Query:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS
        MG RN+ R RR + P I++VWASNF+ EI + + CL+ + IL+IDTEFPG I  +P  SIDE +Y++ RFNVNQ KLIQLG+TAS++ GQ+ GSWEFNFS
Subjt:  MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFS

Query:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA
        DFD Q+D  +PS+I FLE+NGLDF KLKK GIP++ FT  F  II++  + +WVTFHGLYDIGYL+KAMG+   LP+SMEEFA +V   VG+VRDLK +A
Subjt:  DFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMA

Query:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESM
        R+CEGLE GR+GLERLG++L +KRFGMKH+AGSDSLLTA  H +M + FR+  E  +G LYG    L+ M
Subjt:  RFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESM

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 58.0e-3839.83Show/hide
Query:  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQ-IGGSWEFNFSDFDFQVDAHSPSAIPFL
        +VW  N  +E+    +CL+    + IDTEFPG + ++P D+ DE  Y++ +FNV+   LIQLG+T    FG+ I  +WE N SDF+      +  +I FL
Subjt:  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQ-IGGSWEFNFSDFDFQVDAHSPSAIPFL

Query:  EKNGLDFKKLKKYGIPIASFTKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCEGLEDGRLGLER
        + NGLD  K+++ GI I  F  +F  I+ +K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+K MA  C GL   R GL+R
Subjt:  EKNGLDFKKLKKYGIPIASFTKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCEGLEDGRLGLER

Query:  LGKILNKKRFGMKHNAGSDSLLTASAHFEMV
        +  +L  +R G  H+AGSDS LTA    +++
Subjt:  LGKILNKKRFGMKHNAGSDSLLTASAHFEMV

Q9LXM2 Probable CCR4-associated factor 1 homolog 95.0e-3236.08Show/hide
Query:  RQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSP-RDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQI---------GGSWEFNFSDFDFQVD
        R+VWA N  SE     E +  +  +++DTEFPG I +S  R +  +++Y   + NV+ + LIQ+G+T S+  G +         G  WEFNF DFD   D
Subjt:  RQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSP-RDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQI---------GGSWEFNFSDFDFQVD

Query:  AHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLP--IIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCE
        AH+P +I  L + G+DF++  + G+    F +  +   ++   ++  WVTFH  YD GYL+K +     LP ++ EF  ++    G  V D+KHM +FCE
Subjt:  AHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLP--IIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCE

Query:  GLEDGRLGLERLGKILNKKR-FGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNG
            G  GL+R+ + L   R  G  H AGSDSLLT    +   +R R  Y V +G
Subjt:  GLEDGRLGLERLGKILNKKR-FGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNG

Q9LXM4 Putative CCR4-associated factor 1 homolog 81.9e-3942.66Show/hide
Query:  DECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGI
        ++CLR +  + IDTEFP  + ++ + + DEE Y +  F+V++ KLIQLG+T  +  G+IGG+WE NFSDF    DA +  +I FL +NGLD +K+++ GI
Subjt:  DECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGI

Query:  PIASFTKKFLPIIQK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNA
         I  F  +   +++K R    WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL   RLGLE L       R G  H+A
Subjt:  PIASFTKKFLPIIQK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNA

Query:  GSDSLLTASAHFEMVKRF
        GS++ LTA    +++  F
Subjt:  GSDSLLTASAHFEMVKRF

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.8e-4238.43Show/hide
Query:  KPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSA
        +P  R+VW SN + E+ +  ECL+   ++  DTE+PG I ++  DS  +E Y+  + NV   KLIQ G T  N  G+IGG WE NFS+F    D  +  +
Subjt:  KPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSA

Query:  IPFLEKNGLDFKKLKKYGIPI--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRL
        I FL ++GLD +K++  G+ +    F  K + + + +    +VTF G YD  Y +  +     LP++  EFAT VV   G V D K MA FCEGL +  L
Subjt:  IPFLEKNGLDFKKLKKYGIPI--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRL

Query:  GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSES
        GL +L ++L   R G  H+AGSDSL+TA   F  +K          G +YG  +S
Subjt:  GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSES

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.0e-3233.33Show/hide
Query:  IRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQ--SPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGS--------WEFNFSDFDFQV
        IR+VW  N  SE+    E +     + +DTEFPG + +      +  E  Y+  + NVN +K+IQLG+T S++ G +           W+FNF +FD + 
Subjt:  IRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQ--SPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGS--------WEFNFSDFDFQV

Query:  DAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPI-IQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEG
        D ++  +I  L ++G+DF K  ++GI    F +  +   I   +   WVTFH  YD GYL+K +     LP++   F  ++      V D+KH+ +FC  
Subjt:  DAHSPSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPI-IQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEG

Query:  LEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRM-TYEVCNGFLYG
        L     GL +L ++L+ +R G+ H AGSDSLLT+    ++ + F + + E  +G LYG
Subjt:  LEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRM-TYEVCNGFLYG

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-4338.43Show/hide
Query:  KPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSA
        +P  R+VW SN + E+ +  ECL+   ++  DTE+PG I ++  DS  +E Y+  + NV   KLIQ G T  N  G+IGG WE NFS+F    D  +  +
Subjt:  KPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSA

Query:  IPFLEKNGLDFKKLKKYGIPI--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRL
        I FL ++GLD +K++  G+ +    F  K + + + +    +VTF G YD  Y +  +     LP++  EFAT VV   G V D K MA FCEGL +  L
Subjt:  IPFLEKNGLDFKKLKKYGIPI--ASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRL

Query:  GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSES
        GL +L ++L   R G  H+AGSDSL+TA   F  +K          G +YG  +S
Subjt:  GLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSES

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.0e-3739.01Show/hide
Query:  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLE
        +VW  N   E+    +CL+  + + IDTEFPG + ++P D+ +E  Y++ +FNV+   LIQLG T  +  G    +WE N SDFD      +  +I FL+
Subjt:  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLE

Query:  KNGLDFKKLKKYGIPIASFTKKFLPIIQKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCEGLEDGRLGLERL
         NGL+  K+++ GI I  F + F  I+ ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A  C GL   + GL+R+
Subjt:  KNGLDFKKLKKYGIPIASFTKKFLPIIQKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCEGLEDGRLGLERL

Query:  GKILNKKRFGMKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GKILNKKRFGMKHNAGSDSLLTA

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.9e-3739.46Show/hide
Query:  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLE
        +VW  N   E+    +CL+  + + IDTEFPG + ++P D+ +E  Y++ +FNV+   LIQLG T  +  G I  +WE N SDF+      +  +I FL+
Subjt:  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLE

Query:  KNGLDFKKLKKYGIPIASFTKKFLPIIQKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCEGLEDGRLGLERL
         NGL+  K+ + GI I  F + F  I++++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+K +A  C GL   R GL+R+
Subjt:  KNGLDFKKLKKYGIPIASFTKKFLPIIQKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCEGLEDGRLGLERL

Query:  GKILNKKRFGMKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GKILNKKRFGMKHNAGSDSLLTA

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.7e-3939.83Show/hide
Query:  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQ-IGGSWEFNFSDFDFQVDAHSPSAIPFL
        +VW  N  +E+    +CL+    + IDTEFPG + ++P D+ DE  Y++ +FNV+   LIQLG+T    FG+ I  +WE N SDF+      +  +I FL
Subjt:  QVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQ-IGGSWEFNFSDFDFQVDAHSPSAIPFL

Query:  EKNGLDFKKLKKYGIPIASFTKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCEGLEDGRLGLER
        + NGLD  K+++ GI I  F  +F  I+ +K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+K MA  C GL   R GL+R
Subjt:  EKNGLDFKKLKKYGIPIASFTKKFLPII-QKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVG-IVRDLKHMARFCEGLEDGRLGLER

Query:  LGKILNKKRFGMKHNAGSDSLLTASAHFEMV
        +  +L  +R G  H+AGSDS LTA    +++
Subjt:  LGKILNKKRFGMKHNAGSDSLLTASAHFEMV

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-4042.66Show/hide
Query:  DECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGI
        ++CLR +  + IDTEFP  + ++ + + DEE Y +  F+V++ KLIQLG+T  +  G+IGG+WE NFSDF    DA +  +I FL +NGLD +K+++ GI
Subjt:  DECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHSPSAIPFLEKNGLDFKKLKKYGI

Query:  PIASFTKKFLPIIQK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNA
         I  F  +   +++K R    WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL   RLGLE L       R G  H+A
Subjt:  PIASFTKKFLPIIQK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNA

Query:  GSDSLLTASAHFEMVKRF
        GS++ LTA    +++  F
Subjt:  GSDSLLTASAHFEMVKRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAAGAAATCAAACTCGATCAAGAAGATCAAAAAAGCCTTTCATTCGGCAAGTTTGGGCTTCCAACTTCAATTCAGAAATAACAAAATTTGATGAATGTCTTCG
ATTTCACACAATTCTTACCATCGATACTGAATTCCCTGGCTTTATCATACAATCTCCACGGGATTCCATTGATGAAGAGATTTACAAAAATTTTCGTTTCAACGTAAACC
AAATGAAACTCATTCAACTTGGTATCACTGCTTCAAATGATTTTGGTCAAATTGGCGGTTCATGGGAGTTTAATTTTTCTGATTTCGACTTCCAAGTTGATGCTCATTCT
CCTTCTGCCATTCCATTTTTAGAAAAGAATGGTTTGGATTTTAAAAAACTGAAGAAATATGGAATACCCATTGCTTCATTCACTAAAAAATTCTTACCTATCATTCAAAA
ACGTGACATCTTTCGATGGGTCACTTTCCATGGCTTGTATGACATAGGGTATCTCATCAAAGCAATGGGGTTAATCACAGTGTTGCCAAAATCAATGGAAGAATTTGCAA
CGTTGGTTGTTAACGAAGTTGGAATTGTAAGAGATTTGAAGCATATGGCTAGATTCTGTGAAGGACTAGAAGATGGAAGACTTGGACTTGAAAGATTAGGAAAAATATTG
AATAAAAAACGATTCGGAATGAAACATAACGCTGGATCAGATAGCTTGCTTACAGCATCTGCACATTTTGAGATGGTGAAAAGATTCAGAATGACTTATGAAGTTTGTAA
TGGATTTTTGTATGGTTTTTCAGAATCGCTTGAATCCATGAAGATGAAGATGAAGATTTATCATCACAACATTCTTAGGTTAGGTCAAATTCCACATTTTCCTTATACAC
CTTCTTGTATTATTTCCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGAAGAAATCAAACTCGATCAAGAAGATCAAAAAAGCCTTTCATTCGGCAAGTTTGGGCTTCCAACTTCAATTCAGAAATAACAAAATTTGATGAATGTCTTCG
ATTTCACACAATTCTTACCATCGATACTGAATTCCCTGGCTTTATCATACAATCTCCACGGGATTCCATTGATGAAGAGATTTACAAAAATTTTCGTTTCAACGTAAACC
AAATGAAACTCATTCAACTTGGTATCACTGCTTCAAATGATTTTGGTCAAATTGGCGGTTCATGGGAGTTTAATTTTTCTGATTTCGACTTCCAAGTTGATGCTCATTCT
CCTTCTGCCATTCCATTTTTAGAAAAGAATGGTTTGGATTTTAAAAAACTGAAGAAATATGGAATACCCATTGCTTCATTCACTAAAAAATTCTTACCTATCATTCAAAA
ACGTGACATCTTTCGATGGGTCACTTTCCATGGCTTGTATGACATAGGGTATCTCATCAAAGCAATGGGGTTAATCACAGTGTTGCCAAAATCAATGGAAGAATTTGCAA
CGTTGGTTGTTAACGAAGTTGGAATTGTAAGAGATTTGAAGCATATGGCTAGATTCTGTGAAGGACTAGAAGATGGAAGACTTGGACTTGAAAGATTAGGAAAAATATTG
AATAAAAAACGATTCGGAATGAAACATAACGCTGGATCAGATAGCTTGCTTACAGCATCTGCACATTTTGAGATGGTGAAAAGATTCAGAATGACTTATGAAGTTTGTAA
TGGATTTTTGTATGGTTTTTCAGAATCGCTTGAATCCATGAAGATGAAGATGAAGATTTATCATCACAACATTCTTAGGTTAGGTCAAATTCCACATTTTCCTTATACAC
CTTCTTGTATTATTTCCCATTAA
Protein sequenceShow/hide protein sequence
MGGRNQTRSRRSKKPFIRQVWASNFNSEITKFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDAHS
PSAIPFLEKNGLDFKKLKKYGIPIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGIVRDLKHMARFCEGLEDGRLGLERLGKIL
NKKRFGMKHNAGSDSLLTASAHFEMVKRFRMTYEVCNGFLYGFSESLESMKMKMKIYHHNILRLGQIPHFPYTPSCIISH