CuGenDBv2

Gene ID	Cmc11g0288021
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Signal sequence receptor subunit alpha
Genome location	CMiso1.1chr11:2819804..2825938
RNA-Seq Expression	Cmc11g0288021
Synteny	Cmc11g0288021
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component)
InterPro domains	IPR005595 - Translocon-associated protein (TRAP), alpha subunit

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004147020.1 translocon-associated protein subunit alpha [Cucumis sativus]

9.6e-130

96.54

Show/hide

Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MAS AFRIFFLALLLLASPFLQVVRCQSDAE+ESEEA VDDATDLGIVGEEELDYGDGSFSAAPG+DTVCVFPKNSA  +VAGEETEILAGVKNNGDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NV+AIKASVHYTFDHRLLIQNLSAV FNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

XP_008457651.1 PREDICTED: translocon-associated protein subunit alpha [Cucumis melo]

7.8e-132

98.46

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Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MASMA RIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA  +VAGEETEILAGVKNNGDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

XP_022146235.1 translocon-associated protein subunit alpha [Momordica charantia]

2.8e-113

86.92

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Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MAS AFRI FLALLLLASP LQVVRCQSDA+ E E+A V+D TDLGIVGE+E DYGDGSFS A GVDTVCVFPKNSA  +VAGEETE+LAG+KN+GDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NV+AIKASVHYTFDHR++IQNLSA  FNNASVPASSQATFPY F VS++LQSGNFDLVGTIIYEIDQHPYQSTFFNGTI+V EAGGFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGT AYS S SNKSKKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

XP_022946984.1 translocon-associated protein subunit alpha-like [Cucurbita moschata]

8.1e-113

86.54

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Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MAS A+RIFF ALLLLASPFLQVVRCQSDA  ESEEA V D TDLG VGE+E D+GDGSFS APGVDTVCVFPKNSA  +VAGEE E+LAGVKN+GDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NV+AIKASVHYTFDHR+LIQNL+A  FNNASVPASSQATFPY FAVSKYLQ GNFDLVGTIIYE+DQHPYQSTFFNGTI+VAEA GFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        AL+VLLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDASLDEWLEGT AYS S SNK KKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

XP_038902527.1 translocon-associated protein subunit alpha [Benincasa hispida]

2.1e-121

90.77

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Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MAS  FRIFFL LLLLASPFLQVVRCQSDA+ ESE+A VDDATDLGIVGE+ELD+GDGSFSAAPGVDTVCVFPKNSA  +VAGEETE+LAG+KNNGDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NV+AIKASVHYTFDHRLLIQNL+A  FNN SVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTI+VAEAGGFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDASLDEWLEGT AYS S SNKSKKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJC2 Signal sequence receptor subunit alpha

4.6e-130

96.54

Show/hide

Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MAS AFRIFFLALLLLASPFLQVVRCQSDAE+ESEEA VDDATDLGIVGEEELDYGDGSFSAAPG+DTVCVFPKNSA  +VAGEETEILAGVKNNGDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NV+AIKASVHYTFDHRLLIQNLSAV FNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

A0A1S3C642 Signal sequence receptor subunit alpha

3.8e-132

98.46

Show/hide

Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MASMA RIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA  +VAGEETEILAGVKNNGDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

A0A5A7TU84 Signal sequence receptor subunit alpha

3.8e-132

98.46

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Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MASMA RIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA  +VAGEETEILAGVKNNGDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

A0A6J1CWQ9 Signal sequence receptor subunit alpha

1.4e-113

86.92

Show/hide

Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MAS AFRI FLALLLLASP LQVVRCQSDA+ E E+A V+D TDLGIVGE+E DYGDGSFS A GVDTVCVFPKNSA  +VAGEETE+LAG+KN+GDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NV+AIKASVHYTFDHR++IQNLSA  FNNASVPASSQATFPY F VS++LQSGNFDLVGTIIYEIDQHPYQSTFFNGTI+V EAGGFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGT AYS S SNKSKKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

A0A6J1G5G5 Signal sequence receptor subunit alpha

3.9e-113

86.54

Show/hide

Query:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL
        MAS A+RIFF ALLLLASPFLQVVRCQSDA  ESEEA V D TDLG VGE+E D+GDGSFS APGVDTVCVFPKNSA  +VAGEE E+LAGVKN+GDSSL
Subjt:  MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSL

Query:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI
        NV+AIKASVHYTFDHR+LIQNL+A  FNNASVPASSQATFPY FAVSKYLQ GNFDLVGTIIYE+DQHPYQSTFFNGTI+VAEA GFLSIESVFLVTLGI
Subjt:  NVLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGI

Query:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        AL+VLLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDASLDEWLEGT AYS S SNK KKKK
Subjt:  ALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

SwissProt top hits

e value

%identity

Alignment

P45434 Translocon-associated protein subunit alpha

3.1e-75

60.62

Show/hide

Query:  MAFRIFFLALLLLASPFLQVVRCQSDAETESE--EAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSLN
        M  R+ FLALLLLASP LQV RCQSDAE  S   + VV + TD   V E++ D  D + S+ PGV+TVCVFPKNSA  + AGEETE+L G+KN G + + 
Subjt:  MAFRIFFLALLLLASPFLQVVRCQSDAETESE--EAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSLN

Query:  VLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIA
        V+ I+ASVH  +DH+LL+QNL+ +  NNAS+P S QATFPY+FAVS+YLQ G FDLVG IIY+++  PYQS F+NGTI+V E+GG LS ESVFL+TLGI 
Subjt:  VLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIA

Query:  LIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        L++LLGLW + Q+Q L+KKTK+  KVEVGT+S++ASLDEWLEGT     S S K+K KK
Subjt:  LIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

Q54R45 Translocon-associated protein subunit alpha

2.5e-16

29.13

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Query:  LLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKN--SALVAGEETEILAGVKNNGDSSLNVLAIKASVHYT
        L+ L    L ++ C    + E  +  V  AT             D SFS         +FP N      AG   E+L G  NN D +LN+  I AS+++ 
Subjt:  LLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKN--SALVAGEETEILAGVKNNGDSSLNVLAIKASVHYT

Query:  FDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIALIVLLGLWIHG
         D  + IQN +   F  A V     AT  Y F  S+YL+   F L+ ++ Y+     +  TFFN TI++ E      ++S FL+ LG+  +  +G  ++G
Subjt:  FDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIALIVLLGLWIHG

Query:  ------QIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
              +++ +SK  K A +VE   +++     EWL GT+A S  + +  K  K
Subjt:  ------QIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

Arabidopsis top hits

e value

%identity

Alignment

AT2G16595.1 Translocon-associated protein (TRAP), alpha subunit

3.6e-66

54.83

Show/hide

Query:  AFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDG---SFSAAPGVDTVCVFPKNSALV--AGEETEILAGVKNNGDSSLN
        +FR+ F A LLL SPFL+V  CQSD+E        D   ++  VGEEE D  +      ++APG++T+CVFPKNSA +  AG ETE+L G+KN+G S+++
Subjt:  AFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDG---SFSAAPGVDTVCVFPKNSALV--AGEETEILAGVKNNGDSSLN

Query:  VLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIA
        ++A+K S+H  FD    +QNL+A++F+NASVP S+QAT PY FAVSK+LQ+G FD VGTIIYEID  PYQS F+NGTI+V E G    +ESVFL  L I 
Subjt:  VLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIA

Query:  LIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        +I  L ++I   +++++KKTKRAPKVEVGT + DAS DEWLEGT +Y+ S S+KSKKKK
Subjt:  LIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

AT2G21160.1 Translocon-associated protein (TRAP), alpha subunit

2.2e-76

60.62

Show/hide

Query:  MAFRIFFLALLLLASPFLQVVRCQSDAETESE--EAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSLN
        M  R+ FLALLLLASP LQV RCQSDAE  S   + VV + TD   V E++ D  D + S+ PGV+TVCVFPKNSA  + AGEETE+L G+KN G + + 
Subjt:  MAFRIFFLALLLLASPFLQVVRCQSDAETESE--EAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSLN

Query:  VLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIA
        V+ I+ASVH  +DH+LL+QNL+ +  NNAS+P S QATFPY+FAVS+YLQ G FDLVG IIY+++  PYQS F+NGTI+V E+GG LS ESVFL+TLGI 
Subjt:  VLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIA

Query:  LIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK
        L++LLGLW + Q+Q L+KKTK+  KVEVGT+S++ASLDEWLEGT     S S K+K KK
Subjt:  LIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

AT2G21160.2 Translocon-associated protein (TRAP), alpha subunit

6.5e-52

59.36

Show/hide

Query:  MAFRIFFLALLLLASPFLQVVRCQSDAETESE--EAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSLN
        M  R+ FLALLLLASP LQV RCQSDAE  S   + VV + TD   V E++ D  D + S+ PGV+TVCVFPKNSA  + AGEETE+L G+KN G + + 
Subjt:  MAFRIFFLALLLLASPFLQVVRCQSDAETESE--EAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSA--LVAGEETEILAGVKNNGDSSLN

Query:  VLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFL
        V+ I+ASVH  +DH+LL+QNL+ +  NNAS+P S QATFPY+FAVS+YLQ G FDLVG IIY+++  PYQS F+NGTI+V E+GG L
Subjt:  VLAIKASVHYTFDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTCTATGGCCTTCAGGATTTTCTTTCTTGCGCTCCTTCTACTTGCCTCGCCTTTTCTCCAAGTTGTTAGATGTCAATCGGATGCGGAGACGGAATCTGAAGAGGC
CGTTGTTGATGATGCCACTGACTTGGGGATCGTTGGGGAGGAGGAACTAGATTATGGTGATGGGAGCTTCAGCGCTGCCCCAGGGGTTGATACCGTGTGTGTTTTCCCCA
AAAATAGCGCACTAGTGGCCGGAGAAGAGACCGAAATATTAGCAGGAGTGAAAAATAATGGGGATTCTAGCTTGAATGTCCTTGCAATAAAGGCGAGTGTTCATTACACT
TTTGATCACCGATTATTGATTCAAAATCTTTCCGCAGTGACTTTTAACAATGCATCAGTACCAGCATCGTCACAAGCAACTTTCCCATACCTTTTTGCAGTCAGCAAATA
TCTCCAGTCTGGAAATTTTGATCTCGTTGGAACCATTATCTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTCAATGGTACCATTGATGTTGCTGAAGCTGGTG
GTTTTCTCAGCATTGAATCTGTATTTCTAGTTACCCTTGGAATTGCACTTATCGTGCTGCTTGGTTTATGGATTCATGGTCAAATACAGAATCTTTCCAAGAAAACCAAG
AGGGCTCCTAAGGTTGAAGTTGGAACCAAGTCCTCAGATGCTTCATTAGACGAATGGCTGGAGGGCACTGCTGCATATTCCGGGTCATTGTCAAATAAATCAAAGAAAAA
GAAGTAG

mRNA sequence

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GGAAATCAAATCGCGCGAGGTGGGATTTGACCCGGGAACCTAAGACTAGCTCGGTGTGGTGTTGAAATCCACGCGTTGTTCACCGATTTTCTTCATAACAAACGCACCCA
GGCTACGGCAGTCTTCGAAGCTCTCTCAATCATGGCGTCTATGGCCTTCAGGATTTTCTTTCTTGCGCTCCTTCTACTTGCCTCGCCTTTTCTCCAAGTTGTTAGATGTC
AATCGGATGCGGAGACGGAATCTGAAGAGGCCGTTGTTGATGATGCCACTGACTTGGGGATCGTTGGGGAGGAGGAACTAGATTATGGTGATGGGAGCTTCAGCGCTGCC
CCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACTAGTGGCCGGAGAAGAGACCGAAATATTAGCAGGAGTGAAAAATAATGGGGATTCTAGCTTGAATGT
CCTTGCAATAAAGGCGAGTGTTCATTACACTTTTGATCACCGATTATTGATTCAAAATCTTTCCGCAGTGACTTTTAACAATGCATCAGTACCAGCATCGTCACAAGCAA
CTTTCCCATACCTTTTTGCAGTCAGCAAATATCTCCAGTCTGGAAATTTTGATCTCGTTGGAACCATTATCTATGAAATAGATCAGCATCCATATCAAAGTACCTTCTTC
AATGGTACCATTGATGTTGCTGAAGCTGGTGGTTTTCTCAGCATTGAATCTGTATTTCTAGTTACCCTTGGAATTGCACTTATCGTGCTGCTTGGTTTATGGATTCATGG
TCAAATACAGAATCTTTCCAAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGTCCTCAGATGCTTCATTAGACGAATGGCTGGAGGGCACTGCTGCATATT
CCGGGTCATTGTCAAATAAATCAAAGAAAAAGAAGTAGATCACACCTTTTTCTGCCTTTACACTCGACACGTACCAGATACGCAGTCTCTTGTAACTCACAATTAAGCAT
TTGAATTGTTTAAGAGGCGCATCTTATATCAGTTTTTGGAAAGTAGGCTAGTTTAGACTTTTGGAGAAGTTGAGTTATTTGATAGAGATCTTTTAATTTAATCCAAATTT
TTGACCATTTAATTGTTGTTCTTAAGTTACTTCTTGATCGATAACTTTTCTTTATTCCATCTATAGATACCACAGTGTTTTTATGCTTAGCTAACCTAAACATAGTTCGA
CAGGTCTAAGATATACATAACACTCTCAAC

Protein sequence

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MASMAFRIFFLALLLLASPFLQVVRCQSDAETESEEAVVDDATDLGIVGEEELDYGDGSFSAAPGVDTVCVFPKNSALVAGEETEILAGVKNNGDSSLNVLAIKASVHYT
FDHRLLIQNLSAVTFNNASVPASSQATFPYLFAVSKYLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIDVAEAGGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTK
RAPKVEVGTKSSDASLDEWLEGTAAYSGSLSNKSKKKK

Cmc11g0288021 (gene) of Melon (Charmono) v1.1 genome