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Cmc11g0289931 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0289931
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionprotein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Genome locationCMiso1.1chr11:4687144..4688876
RNA-Seq ExpressionCmc11g0289931
SyntenyCmc11g0289931
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153120.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucumis sativus]8.2e-5195.19Show/hide
Query:  STSTSINIFPFPSYQIVRSKTKSSPN-ITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ
        +TSTSINIFPFPSYQI RSK KSSPN I VPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ
Subjt:  STSTSINIFPFPSYQIVRSKTKSSPN-ITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ

Query:  RGER
        RGER
Subjt:  RGER

XP_008459263.1 PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic [Cucumis melo]1.7e-56100Show/hide
Query:  MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT
        MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT
Subjt:  MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT

Query:  PEQRGER
        PEQRGER
Subjt:  PEQRGER

XP_022963874.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita moschata]8.2e-3567.89Show/hide
Query:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG
        + + ++ S + FPFP +    + ++K +S P+  +PFAA P  + LPKRCQ CGGKGAIDCPGCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

XP_023521952.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like [Cucurbita pepo subsp. pepo]1.4e-3467.89Show/hide
Query:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG
        + + ++ S   FPFP +    + ++K++S P+  +PFAA P  + LPKRCQ CGGKGAIDCPGCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

XP_038901776.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X1 [Benincasa hispida]3.6e-3875.68Show/hide
Query:  ATSTSTSINIFPFPSYQIVR------SKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGK
        A + ++S NIFPF  Y++VR      SKTKSS NI++  AA   S LLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCF+CQGFGLKSCP+CGK
Subjt:  ATSTSTSINIFPFPSYQIVR------SKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGK

Query:  GGLTPEQRGER
        GGLTPEQRGER
Subjt:  GGLTPEQRGER

TrEMBL top hitse value%identityAlignment
A0A0A0LIM5 Uncharacterized protein4.0e-5195.19Show/hide
Query:  STSTSINIFPFPSYQIVRSKTKSSPN-ITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ
        +TSTSINIFPFPSYQI RSK KSSPN I VPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ
Subjt:  STSTSINIFPFPSYQIVRSKTKSSPN-ITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ

Query:  RGER
        RGER
Subjt:  RGER

A0A1S3C9W1 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic8.2e-57100Show/hide
Query:  MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT
        MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT
Subjt:  MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLT

Query:  PEQRGER
        PEQRGER
Subjt:  PEQRGER

A0A6J1DHW0 uncharacterized protein LOC1110202036.4e-3366.36Show/hide
Query:  STSTSINIFPF-------PSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKG
        S+ T   IFPF       P   ++    K      + F A  T + LPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCP+CG G
Subjt:  STSTSINIFPF-------PSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKG

Query:  GLTPEQRGER
        GLTPEQRGER
Subjt:  GLTPEQRGER

A0A6J1HLG5 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic4.0e-3567.89Show/hide
Query:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG
        + + ++ S + FPFP +    + ++K +S P+  +PFAA P  + LPKRCQ CGGKGAIDCPGCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

A0A6J1JSI3 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic5.7e-3466.97Show/hide
Query:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG
        + + ++ S   FPFP +    + ++K++S P+  +PFAA P  + LPKRCQ CGGKGAIDC GCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  AATSTSTSINIFPFPSYQ---IVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22630.1 unknown protein5.9e-3185.48Show/hide
Query:  KRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER
        K C+ CG KGAI+CPGCKGTGKNKKNGN+FERWKCF+CQGFG+KSCP+CGKGGLTPEQRGER
Subjt:  KRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTACCTCTACCTCTACCTCTATCAACATCTTCCCATTTCCCTCCTATCAAATTGTTAGAAGTAAAACAAAATCGTCACCCAACATTACTGTTCCTTTTGCTGC
ACTGCCAACATCTAATTTGCTGCCCAAAAGATGCCAGAAGTGTGGAGGTAAAGGGGCCATTGATTGTCCTGGATGTAAGGGAACGGGAAAGAATAAGAAAAACGGAAACA
TCTTCGAGCGTTGGAAATGTTTTGAATGTCAAGGATTTGGATTGAAGAGTTGTCCTCAATGTGGAAAAGGAGGTCTCACTCCAGAACAAAGGGGAGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
TGGTTCACCGTAGAGGTAAGGAAAGAAGTGTGGATAATGTGGAGAGAGAGTTGTGTGAGAGAGAGATCAGAAGAAAAGAAAAAAGTATTAGCCAAAAGGGCACACACAAG
ATTAACTGAAAATGGCTGCTACCTCTACCTCTACCTCTATCAACATCTTCCCATTTCCCTCCTATCAAATTGTTAGAAGTAAAACAAAATCGTCACCCAACATTACTGTT
CCTTTTGCTGCACTGCCAACATCTAATTTGCTGCCCAAAAGATGCCAGAAGTGTGGAGGTAAAGGGGCCATTGATTGTCCTGGATGTAAGGGAACGGGAAAGAATAAGAA
AAACGGAAACATCTTCGAGCGTTGGAAATGTTTTGAATGTCAAGGATTTGGATTGAAGAGTTGTCCTCAATGTGGAAAAGGAGGTCTCACTCCAGAACAAAGGGGAGAAA
GATAAATGCATACAACAACAGCTCCTTTATAATAAACCCTTTATATATCTATACATATACTTTGAATTTTGTATTTTTTCCTGATGTAATCATGTATCTCACAAGGTTTC
TAATTTATATTACATTTTTGTATATTAAATGTGTTTGCTTTTCTTTTTTGATCCTTTTGAATTTT
Protein sequenceShow/hide protein sequence
MAATSTSTSINIFPFPSYQIVRSKTKSSPNITVPFAALPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER