| GenBank top hits | e value | %identity | Alignment |
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| KAA0025998.1 pol protein [Cucumis melo var. makuwa] | 4.5e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| KAA0062342.1 pol protein [Cucumis melo var. makuwa] | 4.5e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| TYK01576.1 pol protein [Cucumis melo var. makuwa] | 4.5e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| TYK06888.1 pol protein [Cucumis melo var. makuwa] | 4.5e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| TYK20443.1 pol protein [Cucumis melo var. makuwa] | 4.5e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SIJ5 Reverse transcriptase | 2.2e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| A0A5A7V2A0 Reverse transcriptase | 2.2e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| A0A5D3BTN0 Reverse transcriptase | 2.2e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| A0A5D3C6W3 Reverse transcriptase | 2.2e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| A0A5D3DA59 Reverse transcriptase | 2.2e-170 | 83.02 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTAFRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSK +L WT+ VSEI SFLGL GYYRRFVE
Subjt: IVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRLPVSEINSFLGLTGYYRRFVE
Query: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
DFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ PVLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Subjt: DFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA
Query: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVADALSRK SA
Subjt: LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSA
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.7e-66 | 36.59 | Show/hide |
Query: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
R+ IDYR+LN++TV +R+ +P +D++ +L F+ ID+ G+HQ+ + + KTAF +++ HYE++ M FGL NAPA F MN + + L+ +
Subjt: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFLWTQ--------------------QRLKRLPV----SEINSFLGLTGYYRRFVEDFSR
V++DDI+++S + EH + L V E L L + K EFL + + +++ P+ EI +FLGLTGYYR+F+ +F+
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFLWTQ--------------------QRLKRLPV----SEINSFLGLTGYYRRFVEDFSR
Query: IASPLTQLTRKGTPF-IWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
IA P+T+ +K NP + +F++LK + P+L VPD ++ F + +DAS LG VL Q G ++Y SR L HE NY T + EL A+V+A K
Subjt: IASPLTQLTRKGTPF-IWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Query: WRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSAY
+RHYL G +I DH+ L + + K+ N + RW + ++D +I Y GK N VADALSR Y
Subjt: WRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSAY
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 1.8e-57 | 34.03 | Show/hide |
Query: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
RL ID+R+LN+ T+ +RY +P I + L A F+ +D++SGYHQ+ + + D KT+F YEF + FGL NA ++F ++ V ++ +
Subjt: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETL-----RANKLYAKFSKLS----EFLWTQQRLKRLP--------------VSEINSFLGLTGYYRRFVEDFSRI
V++DD++I+S+ E++H H+ VL+ L R ++ +F K S F+ ++ K P V ++ SFLGL YYR F++DF+ I
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETL-----RANKLYAKFSKLS----EFLWTQQRLKRLP--------------VSEINSFLGLTGYYRRFVEDFSRI
Query: ASPLTQLTR-----------KGTPFIWNPACEGSFQELKQKLVSTPV-LTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLE
A P+T + + K P +N +FQ L+ L S V L PD + F + +DAS G+G VL Q+G+ + SR LK EQNY T++ E
Subjt: ASPLTQLTR-----------KGTPFIWNPACEGSFQELKQKLVSTPV-LTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLE
Query: LAAVVFALKIWRHYLYGEK-IQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSAYHQASS
L A+V+AL +++LYG + I IF DH+ L + + N + +RW + ++ ++ Y PGK N VADALSR+ ++ ++ S
Subjt: LAAVVFALKIWRHYLYGEK-IQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSAYHQASS
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.6e-61 | 35.25 | Show/hide |
Query: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
R+ IDYR+LN++T+ +RY +P +D++ +L F+ ID+ G+HQ+ + + I KTAF ++ HYE++ M FGL NAPA F MN + + L+ +
Subjt: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL----------WTQQRLKRLPV--------------SEINSFLGLTGYYRRFVEDFSR
V++DDI+I+S + EH + V L L + K EFL T +K P+ EI +FLGLTGYYR+F+ +++
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFL----------WTQQRLKRLPV--------------SEINSFLGLTGYYRRFVEDFSR
Query: IASPLTQLTRKGTPFIWNPACE--GSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK
IA P+T +K T I E +F++LK ++ P+L +PD + FV+ +DAS LG VL Q G +++ SR L HE NY + EL A+V+A K
Subjt: IASPLTQLTRKGTPFIWNPACE--GSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK
Query: IWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSAYHQASSLNKRSRES
+RHYL G + I DH+ L++ KE + RW + +Y +I Y GK N VADALSR +H ++ + ++
Subjt: IWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSAYHQASSLNKRSRES
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.6e-61 | 34.75 | Show/hide |
Query: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
R+ +D++ LN VT+ + Y +P I+ L A F+ +D+ SG+HQ+ +K+SDIPKTAF + YEF+ + FGL NAPA+F +++ + ++ +
Subjt: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFLWTQ--------------------QRLKRLP----VSEINSFLGLTGYYRRFVEDFSR
V+IDDI+++S+ H ++L VL +L L K S FL TQ + + +P V E+ FLG+T YYR+F++D+++
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFLWTQ--------------------QRLKRLP----VSEINSFLGLTGYYRRFVEDFSR
Query: IASPLTQLTR-----------KGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPT
+A PLT LTR P + SF +LK L S+ +L P ++ F + +DAS +G VL Q + + +AY SR L E+NY T
Subjt: IASPLTQLTR-----------KGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPT
Query: HDLELAAVVFALKIWRHYLYGE-KIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSR
+ E+ A++++L R YLYG I+++ DH+ L + + N + +RW +++Y+CE++Y PGK+NVVADALSR
Subjt: HDLELAAVVFALKIWRHYLYGE-KIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSR
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.7e-55 | 34.97 | Show/hide |
Query: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
RLC+DYR LNK T+ + + LPRID+L ++ A IF+ +D+ SGYHQ+ ++ D KTAF + YE+ VM FGL NAP+ F M F+D FV
Subjt: RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKL------SEFLWTQQRLKRL-----------------PVSEINSFLGLTGYYRRFVEDFSRI
V++DDILI+S++ EH +HL VLE L+ L K K +EFL ++++ V + FLG+ YYRRF+ + S+I
Subjt: VFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKL------SEFLWTQQRLKRL-----------------PVSEINSFLGLTGYYRRFVEDFSRI
Query: ASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHEQNYPTHDLELAAVVF
A P+ + W + + +LK L ++PVL + ++ + +DASK G+G VL + VV Y S+ L+S ++NYP +LEL ++
Subjt: ASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHEQNYPTHDLELAAVVF
Query: ALKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSAYHQASSLNKRSRES
AL +R+ L+G+ + DH SL + E R +RWL+ + YD + Y G NVVADA+SR ++ + ++ S +S
Subjt: ALKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSAYHQASSLNKRSRES
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