CuGenDBv2

Gene ID	Cmc11g0295121
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon opus
Genome location	CMiso1.1chr11:12246073..12246708
RNA-Seq Expression	Cmc11g0295121
Synteny	Cmc11g0295121
Gene Ontology terms	NA
InterPro domains	IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KYP30916.1 Retrovirus-related Pol polyprotein from transposon 17.6, partial [Cajanus cajan]

1.4e-75

63.51

Show/hide

Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCMLSIF++F+  CIEVFM DFTVYG+ F +CL++L+ +L RCI+TNL+LNFEKCHFM   GIVLGH++SSKGIEVD AK++VI  L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
         YP+C+++VRSF   AGFYRRF+K+FSK  LPL+NLL+KDV FV DD+C   FD LK+ LT++PI+Q  +W  PFE++CDA++Y LG VL QRVD     
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        IY+ SRTL++A
Subjt:  IYFTSRTLNSA

KYP78666.1 Retrovirus-related Pol polyprotein from transposon opus [Cajanus cajan]

3.5e-77

64.45

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCMLSIF++F+  CIEVFM DFT+YG+ F +CL+NL+ +L RCI+T+L+LNFEKCHFM   GIVLGH++SS+GIEVD AKI+VI  L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
         YP+C+++VRSF V AGFYRRFIK+FSK  LPL+NLL+K+V FV DD+C  VFD LK+ LT++PI+Q L+W  PFE++CD ++Y LG VL QRVD     
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        IY+ SRTLN+A
Subjt:  IYFTSRTLNSA

XP_021603241.1 uncharacterized protein LOC110608326 [Manihot esculenta]

2.2e-76

63.98

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCM+SIF+ F+ K IEVFM DFTVYGN F  CL NL  ILKRC+++NL+LN+EKCHFM   G++LGH VS++GIEVDKAK++VI++L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
         YPTC++D+RSF   AGFYRRFIKDFS+I  PL  LL+KDVPF  D++C   F+TLK+KL ++PI+Q  NW+ PFEI+CDA++Y LG VLGQR+D K H 
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        I + SRTL+ A
Subjt:  IYFTSRTLNSA

XP_023758997.1 uncharacterized protein LOC111907462 [Lactuca sativa]

5.5e-75

63.98

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCM+SIF+ ++   IEVFM DFTVYGN F  CL NL  ILKRCI+TNL+LNFEKCHFM S G++LGH+VS KGIEVDKAKI+VIQ+L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
         YPTC+++VRSF   AGFYRRFIKDFSKI  P+  LL+K+V F  ++ C   FD LK+ LTS+PI+Q  NW+ PFEI+CDA++Y +G VLGQ+     H 
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        IY+ SRTL++A
Subjt:  IYFTSRTLNSA

XP_024932191.1 uncharacterized protein LOC112492555, partial [Ziziphus jujuba]

5.0e-76

65.88

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCM+SIF++ +   IE+FM DF+V+G+ F SCL NL  +L RC +TNL+LN+EKCHFM   GIVLGH VS +GIEVDKAKI VI+ L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
          PT +K +RSF   AGFYRRFIKDFSKI  PL NLL KDVPFV DD+CMH F+ LK+KL  +PI+ T NWN PFEI+CDA+DY +G VLGQR D KLH 
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        IY+ SRTLN A
Subjt:  IYFTSRTLNSA

TrEMBL top hits

e value

%identity

Alignment

A0A151QKV4 Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment)

7.0e-76

63.51

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCMLSIF++F+  CIEVFM DFTVYG+ F +CL++L+ +L RCI+TNL+LNFEKCHFM   GIVLGH++SSKGIEVD AK++VI  L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
         YP+C+++VRSF   AGFYRRF+K+FSK  LPL+NLL+KDV FV DD+C   FD LK+ LT++PI+Q  +W  PFE++CDA++Y LG VL QRVD     
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        IY+ SRTL++A
Subjt:  IYFTSRTLNSA

A0A151QZW2 Transposon Ty3-G Gag-Pol polyprotein (Fragment)

3.5e-75

63.03

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCMLSIF++F+  CIE+FM DFTVYG+ F +CL++L+  L RCI+TNL+LNFEKCHFM   GIVLGH++SSKGIEVD AK++VI  L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
         YP+C+++VRSF   AGFYRRF+K+FSK  LPL+NLL+KDV FV DD+C   FD LK+ LT++PI+Q  +W  PFE++CDA++Y LG VL QRVD     
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        IY+ SRTL++A
Subjt:  IYFTSRTLNSA

A0A151UH77 Retrovirus-related Pol polyprotein from transposon opus

1.7e-77

64.45

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCMLSIF++F+  CIEVFM DFT+YG+ F +CL+NL+ +L RCI+T+L+LNFEKCHFM   GIVLGH++SS+GIEVD AKI+VI  L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
         YP+C+++VRSF V AGFYRRFIK+FSK  LPL+NLL+K+V FV DD+C  VFD LK+ LT++PI+Q L+W  PFE++CD ++Y LG VL QRVD     
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        IY+ SRTLN+A
Subjt:  IYFTSRTLNSA

A0A6P6GDJ4 Reverse transcriptase

2.4e-76

65.88

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCM+SIF++ +   IE+FM DF+V+G+ F SCL NL  +L RC +TNL+LN+EKCHFM   GIVLGH VS +GIEVDKAKI VI+ L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
          PT +K +RSF   AGFYRRFIKDFSKI  PL NLL KDVPFV DD+CMH F+ LK+KL  +PI+ T NWN PFEI+CDA+DY +G VLGQR D KLH 
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        IY+ SRTLN A
Subjt:  IYFTSRTLNSA

A0A6P6GGJ1 LOW QUALITY PROTEIN: uncharacterized protein LOC112492876

1.7e-74

64.93

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF LCNAP TFQRCM+SIF+N +   IE+FM DF+V+G+ F SCL NL  +L RC +TNL+LN+EKCHFM   GIVLGH VS  GIEVDKAKI VI+ L
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
          PT +K +RSF    GFYRRFIKDFSKI   L NLL KDVPFV DD+CMH F+ LK+KL  +PI+ T NWN PFEI+CDA+D+ +G VLGQR D KLH 
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSRTLNSA
        IY+ SRTLN A
Subjt:  IYFTSRTLNSA

SwissProt top hits

e value

%identity

Alignment

P04323 Retrovirus-related Pol polyprotein from transposon 17.6

1.1e-28

34.76

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF L NAP TFQRCM  I    + K   V++ D  V+       L +L L+ ++    NL L  +KC F+      LGH+++  GI+ +  KI  IQ  
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPF-VIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLH
          PT  K++++F    G+YR+FI +F+ I  P+T  LKK++     + +    F  LK  ++  PIL+  ++   F +  DA+D  LG VL Q      H
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPF-VIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLH

Query:  AIYFTSRTLN
         + + SRTLN
Subjt:  AIYFTSRTLN

P10394 Retrovirus-related Pol polyprotein from transposon 412

1.2e-24

34.95

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        +PF L  AP +FQR M   F+        ++M D  V G      L NL  +  +C + NL L+ EKC F       LGH  + KGI  D  K +VIQN 
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA
          P      R F     +YRRFIK+F+     +T L KK+VPF   D+C   F  LK +L +  +LQ  +++  F I  DA+    G VL Q  +     
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHA

Query:  IYFTSR
        + + SR
Subjt:  IYFTSR

P10401 Retrovirus-related Pol polyprotein from transposon gypsy

2.5e-22

31.86

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        +PF L NA + FQR +  +    IGK   V++ D  ++  +    + +++ +LK  ID N+ ++ EK  F       LG +VS  G + D  K+  IQ  
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLK-----------KDVPFVIDDKCMHVFDTLKDKLTSSP-ILQTLNWNSPFEIICDANDYVLGV
          P C+  VRSF   A +YR FIKDF+ I  P+T++LK           K +P   ++   + F  L++ L S   IL+  ++  PF++  DA+   +G 
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLK-----------KDVPFVIDDKCMHVFDTLKDKLTSSP-ILQTLNWNSPFEIICDANDYVLGV

Query:  VLGQ
        VL Q
Subjt:  VLGQ

P20825 Retrovirus-related Pol polyprotein from transposon 297

3.3e-30

35.24

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        MPF L NAP TFQRCM +I    + K   V++ D  ++       LN+++L+  +  D NL L  +KC F+      LGH+V+  GI+ +  K+  I + 
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDD-KCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLH
          PT  K++R+F    G+YR+FI +++ I  P+T+ LKK         + +  F+ LK  +   PILQ  ++   F +  DA++  LG VL Q      H
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDD-KCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLH

Query:  AIYFTSRTLN
         I F SRTLN
Subjt:  AIYFTSRTLN

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus

1.0e-31

34.09

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Query:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL
        +PF L NAP  FQR +  I    IGK   V++ D  V+  D+ +   NL L+L      NL +N EK HF+ +    LG++V++ GI+ D  K+  I  +
Subjt:  MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNL

Query:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLK-----------KDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVV
          PT +K+++ F     +YR+FI+D++K+  PLTNL +             VP  +D+  +  F+ LK  L SS IL    +  PF +  DA+++ +G V
Subjt:  SYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLK-----------KDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVV

Query:  LGQRVDNKLHAIYFTSRTLN
        L Q    +   I + SR+LN
Subjt:  LGQRVDNKLHAIYFTSRTLN

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.2e-12

31.82

Show/hide

Query:  LNNLELILKRCIDTNLMLNFEKCHFMASYGIVLG--HLVSSKGIEVDKAKINVIQNLSYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPF
        +N+L ++L+         N +KC F       LG  H++S +G+  D AK+  +     P    ++R F    G+YRRF+K++ KIV PLT LLKK+   
Subjt:  LNNLELILKRCIDTNLMLNFEKCHFMASYGIVLG--HLVSSKGIEVDKAKINVIQNLSYPTCLKDVRSFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPF

Query:  VIDDKCMHVFDTLKDKLTSSPILQTLNWNSPF
           +     F  LK  +T+ P+L   +   PF
Subjt:  VIDDKCMHVFDTLKDKLTSSPILQTLNWNSPF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCCCTTTGAACTATGTAATGCTCCTACAACATTTCAAAGATGCATGTTAAGCATATTCACTAATTTCATAGGAAAATGCATAGAAGTGTTCATGGTTGATTTTACAGT
TTATGGGAATGATTTTTATTCTTGCTTGAATAATTTAGAGTTGATTTTAAAGAGATGTATTGATACTAACTTAATGCTTAACTTTGAAAAGTGTCATTTCATGGCCTCTT
ACGGTATAGTACTAGGACACTTAGTATCATCTAAGGGAATAGAAGTTGACAAAGCTAAAATTAATGTAATTCAAAACTTATCCTACCCCACTTGTTTAAAAGATGTTAGA
TCATTTTTTGTTAGTGCCGGATTTTATAGAAGGTTCATAAAAGACTTTTCTAAGATAGTTTTGCCTCTGACAAATTTACTTAAAAAAGATGTCCCTTTTGTAATTGATGA
TAAATGCATGCATGTTTTTGATACTTTGAAAGATAAATTGACTTCTTCTCCTATCTTGCAAACACTTAATTGGAACTCACCATTTGAAATAATATGTGATGCAAATGATT
ATGTATTAGGTGTAGTACTAGGACAAAGAGTAGATAACAAATTGCATGCTATATATTTCACATCTCGAACTCTGAATTCTGCTTAA

mRNA sequence

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Protein sequence

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MPFELCNAPTTFQRCMLSIFTNFIGKCIEVFMVDFTVYGNDFYSCLNNLELILKRCIDTNLMLNFEKCHFMASYGIVLGHLVSSKGIEVDKAKINVIQNLSYPTCLKDVR
SFFVSAGFYRRFIKDFSKIVLPLTNLLKKDVPFVIDDKCMHVFDTLKDKLTSSPILQTLNWNSPFEIICDANDYVLGVVLGQRVDNKLHAIYFTSRTLNSA

Cmc11g0295121 (gene) of Melon (Charmono) v1.1 genome