; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc11g0295231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0295231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr11:12454426..12455118
RNA-Seq ExpressionCmc11g0295231
SyntenyCmc11g0295231
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KZV26201.1 hypothetical protein F511_28547 [Dorcoceras hygrometricum]1.5e-9473.42Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        L+RL+ +NL+P    +  H+CEVCVE+K+TK PFH  ER T PLELIHSDI DLKFVQTRGGKKYF+TFIDDCTRYCYVYLL+ KDEA+E F+ YK EVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL  +IK IRSDRGGEYG PF+ +C K GIIH TTAPYSPQSNG+AERKNRTLKEMMNA+LI+SGLPQNLWGEA+L+AN++LN+IP KK    PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMPK
        G KPSYK+LKVW CLAKV +PK
Subjt:  GRKPSYKFLKVWECLAKVAMPK

KZV39555.1 hypothetical protein F511_13790, partial [Dorcoceras hygrometricum]2.0e-9473.42Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        L+RL N+N++P F  +   +CE+CVE+K+ KAPFH   R TKPLELIH+D+ DLK VQTRGGK+YFITFIDDCTRYCYVYLL+SKDEA+E F  YK EVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL++KIK IRSDRGGEY  PFE+FCS  GIIH TTAPYSPQSNG+AERKNRTLKEMMNA+L +SGLPQNLWGEA+LTAN++LN+IPHK     PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMPK
        GRKPSYK+LKVW CLAKV +PK
Subjt:  GRKPSYKFLKVWECLAKVAMPK

KZV51625.1 hypothetical protein F511_24998 [Dorcoceras hygrometricum]2.0e-9473.42Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        L+RL N+N++P F  +   +CE+CVE+K+ KAPFH   R TKPLELIH+D+ DLK VQTRGGK+YFITFIDDCTRYCYVYLL+SKDEA+E F  YK EVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL++KIK IRSDRGGEY  PFE+FCS  GIIH TTAPYSPQSNG+AERKNRTLKEMMNA+L +SGLPQNLWGEA+LTAN++LN+IPHK     PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMPK
        GRKPSYK+LKVW CLAKV +PK
Subjt:  GRKPSYKFLKVWECLAKVAMPK

RVW87884.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]7.5e-9473.3Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        LRRLIN+N IP F  ++NH+CE+CVE+K+T++ F   ER T+PL+LIHSDI DLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL+ KIK +RSDRGGEY  PF   C++HGIIH TTAPYSPQSNG+AERKNRTLKEMMNAMLISS LPQN+WGEA+LTANYLLN++P KK++  PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMP
        GRKPSY +L++W CLAKVA+P
Subjt:  GRKPSYKFLKVWECLAKVAMP

RVX15136.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.3e-9373.3Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        LRRLIN+N IP F  ++NH+CE CVE+K+T++ F   ER T+PL+LIHSDI DLKFVQTRGG KYFITF+DD T+YCYVYLLKSKDEA+E F LYK EVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL+ KIK +RSDRGGEY  PF   C++HGIIH TTAPYSPQSNG+AERKNRTLKEMMNAMLISS LPQN+WGEA+LTANYLLN++P KK++  PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMP
        GRKPSY +L++W CLAKVA+P
Subjt:  GRKPSYKFLKVWECLAKVAMP

TrEMBL top hitse value%identityAlignment
A0A2N9F2Q4 Integrase catalytic domain-containing protein2.7e-9775.11Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        L RL+N+NL+PKF  DTNH+CE CVE+K+T+  FH  ER + PLELIHSD+ DLKFVQTRGG+KYF+TFIDDCTRYCYVYLL+SKDEA+E F  YKKEVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL+ KIK +RSDRGGEY  PF  FCS+HGI+H TTAPYSPQ NG+AERKNRTLKEMMNAMLISSGLPQNLWGEA+L+ANY+LN++P KK    PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMP
        GR PSY+FLKVW CLAKVA+P
Subjt:  GRKPSYKFLKVWECLAKVAMP

A0A2N9F9L9 Integrase catalytic domain-containing protein1.1e-9875.57Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        L RL+N+NL+PKF  DTNH+CE CVE+K+T+ PFH  ER + PLELIHSD+ DLKFVQTRGG+KYF+TFIDDCTRYCYVYLL+SKDEA+E F  YKKEVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL+ KIK +RSDRGGEY  PF +FCS+HGI+H TTAPYSPQ NG+AERKNRTLKEMMNAMLISSGLPQNLWGEA+L+ANY+LN++P KK    PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMP
        GR PSY+FLKVW CLAKVA+P
Subjt:  GRKPSYKFLKVWECLAKVAMP

A0A2N9HDE2 Integrase catalytic domain-containing protein9.3e-9875.11Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        L RL+N+NL+PKF  DTNH+CE CVE+K+T+  FH  ER + PLELIHSD+ DLKFVQTRGG+KYF+TFIDDCTRYCYVYLL+SKDEA+E F  YKKEVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL+ KIK +RSDRGGEY  PF +FCS+HGI+H TTAPYSPQ NG+AERKNRTLKEMMNAMLISSGLPQNLWGEA+L+ANY+LN++P KK    PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMP
        GR PSY+FLKVW CLAKVA+P
Subjt:  GRKPSYKFLKVWECLAKVAMP

A0A2N9IGG8 Integrase catalytic domain-containing protein2.7e-9775.11Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        L RL+N+NL+PKF  DTNH+CE CVE+K+T+  FH  ER + PLELIHSD+ DLKFVQTRGG+KYF+TFIDDCTRYCYVYLL+SKDEA+E F  YKKEVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL+ KIK +RSDRGGEY  PF  FCS+HGI+H TTAPYSPQ NG+AERKNRTLKEMMNAMLISSGLPQNLWGEA+L+ANY+LN++P KK    PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMP
        GR PSY+FLKVW CLAKVA+P
Subjt:  GRKPSYKFLKVWECLAKVAMP

A0A2N9J5F7 Integrase catalytic domain-containing protein9.3e-9875.11Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE
        L RL+N+NL+PKF  DTNH+CE CVE+K+T+  FH  ER + PLELIHSD+ DLKFVQTRGG+KYF+TFIDDCTRYCYVYLL+SKDEA+E F  YKKEVE
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVE

Query:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK
        NQL+ KIK +RSDRGGEY  PF +FCS+HGI+H TTAPYSPQ NG+AERKNRTLKEMMNAMLISSGLPQNLWGEA+L+ANY+LN++P KK    PYE WK
Subjt:  NQLSTKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWK

Query:  GRKPSYKFLKVWECLAKVAMP
        GR PSY+FLKVW CLAKVA+P
Subjt:  GRKPSYKFLKVWECLAKVAMP

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.9e-3337.69Show/hide
Query:  CEVCVESKITKAPFHYTERMT---KPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVENQLSTKIKAIRSDRGGE
        CE C+  K  + PF   +  T   +PL ++HSD+       T   K YF+ F+D  T YC  YL+K K +   MF+ +  + E   + K+  +  D G E
Subjt:  CEVCVESKITKAPFHYTERMT---KPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVENQLSTKIKAIRSDRGGE

Query:  Y-GPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHK---KSQNIPYEKWKGRKPSYKFLKVW
        Y      QFC K GI +  T P++PQ NG++ER  RT+ E    M+  + L ++ WGEA+LTA YL+NRIP +    S   PYE W  +KP  K L+V+
Subjt:  Y-GPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHK---KSQNIPYEKWKGRKPSYKFLKVW

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-949.1e-4240.89Show/hide
Query:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFH-YTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEV
        L+ L   +LI      T   C+ C+  K  +  F   +ER    L+L++SD+     +++ GG KYF+TFIDD +R  +VY+LK+KD+  ++F+ +   V
Subjt:  LRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFH-YTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEV

Query:  ENQLSTKIKAIRSDRGGEY-GPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPH-KKSQNIPYE
        E +   K+K +RSD GGEY    FE++CS HGI H  T P +PQ NG+AER NRT+ E + +ML  + LP++ WGEA+ TA YL+NR P    +  IP  
Subjt:  ENQLSTKIKAIRSDRGGEY-GPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPH-KKSQNIPYE

Query:  KWKGRKPSYKFLKVWECLAKVAMPK
         W  ++ SY  LKV+ C A   +PK
Subjt:  KWKGRKPSYKFLKVWECLAKVAMPK

Q12490 Transposon Ty1-BL Gag-Pol polyprotein7.8e-1728.96Show/hide
Query:  NHRCEVCVESKITKAPFHYTERMT-----KPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLL--KSKDEAVEMFKLYKKEVENQLSTKIKAI
        +++C  C+  K TK       R+      +P + +H+DI+       +    YFI+F D+ T++ +VY L  + +D  +++F      ++NQ    +  I
Subjt:  NHRCEVCVESKITKAPFHYTERMT-----KPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLL--KSKDEAVEMFKLYKKEVENQLSTKIKAI

Query:  RSDRGGEY-GPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQ
        + DRG EY      +F  K+GI    T     +++G+AER NRTL +     L  SGLP +LW  A+  +  + N +   KS+
Subjt:  RSDRGGEY-GPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQ

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.9e-3137.24Show/hide
Query:  CEVCVESKITKAPF-HYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVENQLSTKIKAIRSDRGGEYG
        C  C+ +K  K PF   T   T+PLE I+SD++    + +    +Y++ F+D  TRY ++Y LK K +  E F  +K  +EN+  T+I    SD GGE+ 
Subjt:  CEVCVESKITKAPF-HYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVENQLSTKIKAIRSDRGGEYG

Query:  PPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQ-NIPYEKWKGRKPSYKFLKVWEC
          +E F S+HGI HLT+ P++P+ NG++ERK+R + E    +L  + +P+  W  A   A YL+NR+P    Q   P++K  G  P+Y  L+V+ C
Subjt:  PPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQ-NIPYEKWKGRKPSYKFLKVWEC

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.2e-3136.73Show/hide
Query:  CEVCVESKITKAPF-HYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVENQLSTKIKAIRSDRGGEYG
        C  C  +K  K PF + T   +KPLE I+SD++    +      +Y++ F+D  TRY ++Y LK K +  + F ++K  VEN+  T+I  + SD GGE+ 
Subjt:  CEVCVESKITKAPF-HYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVENQLSTKIKAIRSDRGGEYG

Query:  PPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQ-NIPYEKWKGRKPSYKFLKVWEC
             + S+HGI H T+ P++P+ NG++ERK+R + EM   +L  + +P+  W  A   A YL+NR+P    Q   P++K  G+ P+Y+ LKV+ C
Subjt:  PPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQ-NIPYEKWKGRKPSYKFLKVWEC

Arabidopsis top hitse value%identityAlignment
ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-0431.88Show/hide
Query:  NRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKK-SQNIPYEKWKGRKPSYKFLKVWECLAKV
        NRT+ E + +ML   GLP+    +A  TA +++N+ P    + ++P E W    P+Y +L+ + C+A +
Subjt:  NRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKK-SQNIPYEKWKGRKPSYKFLKVWECLAKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACTTCAATTTTTTTGCGTAGGCTGATTAATATGAACTTAATTCCAAAATTCACTTTTGATACAAATCATAGATGTGAAGTATGTGTGGAATCAAAAATAACCAA
AGCACCTTTTCATTACACTGAGAGAATGACCAAACCTTTAGAGTTAATTCACAGTGATATTTATGACTTGAAATTTGTGCAAACTAGAGGTGGGAAAAAGTATTTTATTA
CTTTTATAGATGACTGCACAAGATATTGTTATGTTTATCTGCTGAAAAGCAAAGATGAGGCAGTTGAAATGTTTAAGCTTTATAAAAAAGAGGTTGAAAATCAACTTAGC
ACAAAAATTAAGGCAATAAGAAGTGATCGAGGTGGTGAATATGGTCCTCCTTTTGAACAATTTTGTTCAAAACATGGCATTATTCACCTAACTACTGCTCCATACTCACC
TCAATCCAATGGAATTGCTGAAAGAAAAAACCGAACACTTAAGGAAATGATGAACGCTATGCTTATAAGTTCAGGTTTACCCCAAAATTTGTGGGGAGAAGCTTTGTTGA
CAGCAAATTACTTATTAAACAGAATACCTCATAAGAAGTCACAAAATATTCCTTATGAAAAATGGAAAGGAAGAAAACCTTCATACAAATTCTTAAAAGTGTGGGAGTGC
CTAGCAAAGGTTGCAATGCCTAAAAATGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACTTCAATTTTTTTGCGTAGGCTGATTAATATGAACTTAATTCCAAAATTCACTTTTGATACAAATCATAGATGTGAAGTATGTGTGGAATCAAAAATAACCAA
AGCACCTTTTCATTACACTGAGAGAATGACCAAACCTTTAGAGTTAATTCACAGTGATATTTATGACTTGAAATTTGTGCAAACTAGAGGTGGGAAAAAGTATTTTATTA
CTTTTATAGATGACTGCACAAGATATTGTTATGTTTATCTGCTGAAAAGCAAAGATGAGGCAGTTGAAATGTTTAAGCTTTATAAAAAAGAGGTTGAAAATCAACTTAGC
ACAAAAATTAAGGCAATAAGAAGTGATCGAGGTGGTGAATATGGTCCTCCTTTTGAACAATTTTGTTCAAAACATGGCATTATTCACCTAACTACTGCTCCATACTCACC
TCAATCCAATGGAATTGCTGAAAGAAAAAACCGAACACTTAAGGAAATGATGAACGCTATGCTTATAAGTTCAGGTTTACCCCAAAATTTGTGGGGAGAAGCTTTGTTGA
CAGCAAATTACTTATTAAACAGAATACCTCATAAGAAGTCACAAAATATTCCTTATGAAAAATGGAAAGGAAGAAAACCTTCATACAAATTCTTAAAAGTGTGGGAGTGC
CTAGCAAAGGTTGCAATGCCTAAAAATGGTTAA
Protein sequenceShow/hide protein sequence
MSTSIFLRRLINMNLIPKFTFDTNHRCEVCVESKITKAPFHYTERMTKPLELIHSDIYDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAVEMFKLYKKEVENQLS
TKIKAIRSDRGGEYGPPFEQFCSKHGIIHLTTAPYSPQSNGIAERKNRTLKEMMNAMLISSGLPQNLWGEALLTANYLLNRIPHKKSQNIPYEKWKGRKPSYKFLKVWEC
LAKVAMPKNG