| GenBank top hits | e value | %identity | Alignment |
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| KAA0037906.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.1e-78 | 88.34 | Show/hide |
Query: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
MRLCI+ RE NKVTVKN YPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIR+ DIPKTA CSRYGHYEF+VMSF LTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
IVFIDDIL+YSKT EHE+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSSEGVSVDP
Subjt: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| KAA0048739.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 1.1e-78 | 91.41 | Show/hide |
Query: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
M LCI+ RE NKVTVK+ YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR+SDIPKT CSRYGHYEFIVMSF LTNAPAVFMDLMNRVFKDFLDTFV
Subjt: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
IVFIDDILVYSKT VEHED LHQVLGT RANKLYAKF KCEFWLKKVSFLGHVVSSEGVSVDP
Subjt: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| KAA0051925.1 pol protein [Cucumis melo var. makuwa] | 1.2e-77 | 89.57 | Show/hide |
Query: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
MRLCI+ RE NKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR+S+IPKTA CSRYGHYEFIVMSF LTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
IVFIDDIL+YSKT VEHE HLHQVL TLRANKLYAKF KCEFWLK V+FLGHVVSSEGVS+DP
Subjt: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| KAA0061793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.9e-78 | 98.65 | Show/hide |
Query: EPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDIL
EPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR+SDIPKTALCSRYGHY+FIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDIL
Subjt: EPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDIL
Query: VYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSS
VYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSS
Subjt: VYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSS
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| TYK12237.1 pol protein [Cucumis melo var. makuwa] | 1.2e-77 | 89.57 | Show/hide |
Query: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
MRLCI+ RE NKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR+S+IPKTA CSRYGHYEFIVMSF LTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
IVFIDDIL+YSKT VEHE HLHQVL TLRANKLYAKF KCEFWLK V+FLGHVVSSEGVS+DP
Subjt: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T6U3 Reverse transcriptase | 3.4e-78 | 88.34 | Show/hide |
Query: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
MRLCI+ RE NKVTVKN YPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIR+ DIPKTA CSRYGHYEF+VMSF LTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
IVFIDDIL+YSKT EHE+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSSEGVSVDP
Subjt: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| A0A5A7UDZ3 Reverse transcriptase | 5.8e-78 | 89.57 | Show/hide |
Query: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
MRLCI+ RE NKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR+S+IPKTA CSRYGHYEFIVMSF LTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
IVFIDDIL+YSKT VEHE HLHQVL TLRANKLYAKF KCEFWLK V+FLGHVVSSEGVS+DP
Subjt: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| A0A5A7V0V8 Ty3-gypsy retrotransposon protein | 9.0e-79 | 98.65 | Show/hide |
Query: EPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDIL
EPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR+SDIPKTALCSRYGHY+FIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDIL
Subjt: EPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDIL
Query: VYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSS
VYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSS
Subjt: VYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSS
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| A0A5D3CJW2 Reverse transcriptase | 5.8e-78 | 89.57 | Show/hide |
Query: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
MRLCI+ RE NKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR+S+IPKTA CSRYGHYEFIVMSF LTNAPAVFMDLMNRVFKDFLD+FV
Subjt: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
IVFIDDIL+YSKT VEHE HLHQVL TLRANKLYAKF KCEFWLK V+FLGHVVSSEGVS+DP
Subjt: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| A0A5D3E7D9 DNA/RNA polymerases superfamily protein | 5.3e-79 | 91.41 | Show/hide |
Query: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
M LCI+ RE NKVTVK+ YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR+SDIPKT CSRYGHYEFIVMSF LTNAPAVFMDLMNRVFKDFLDTFV
Subjt: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
IVFIDDILVYSKT VEHED LHQVLGT RANKLYAKF KCEFWLKKVSFLGHVVSSEGVSVDP
Subjt: IVFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.1e-28 | 35.8 | Show/hide |
Query: RLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVI
R+ I+ R+ N++TV + +P+P +D++ +L F+ IDL G+HQ+ + + KTA +++GHYE++ M F L NAPA F MN + + L+ +
Subjt: RLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
V++DDI+V+S ++ EH L V L L + KCEF ++ +FLGHV++ +G+ +P
Subjt: VFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.5e-30 | 36.42 | Show/hide |
Query: RLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVI
R+ I+ R+ N++T+ + YP+P +D++ +L F+ IDL G+HQ+ + E I KTA ++ GHYE++ M F L NAPA F MN + + L+ +
Subjt: RLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
V++DDI+++S ++ EH + + V L L + KCEF K+ +FLGH+V+ +G+ +P
Subjt: VFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVSVDP
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| P31843 RNA-directed DNA polymerase homolog | 1.6e-32 | 54.33 | Show/hide |
Query: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
+R+CI+ R KVT+KN YP+PR+DDLFD+L AT F+K+DLRSGY Q+RI + D PKT +RYG +EF VM F LTNA A F +LMN V ++LD FV
Subjt: MRLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILV---YSKTVVEHEDHLHQV
+V++DD++V YS ++ EH HL V
Subjt: IVFIDDILV---YSKTVVEHEDHLHQV
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.1e-28 | 40.25 | Show/hide |
Query: RLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVI
RLC++ R NK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D KTA + G YE+ VM F L NAP+ F M F+D FV
Subjt: RLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVS
V++DDIL++S++ EH HL VL L+ L K KC+F ++ FLG+ + + ++
Subjt: VFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVS
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.1e-28 | 40.25 | Show/hide |
Query: RLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVI
RLC++ R NK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D KTA + G YE+ VM F L NAP+ F M F+D FV
Subjt: RLCINCREPNKVTVKNHYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRESDIPKTALCSRYGHYEFIVMSFDLTNAPAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVS
V++DDIL++S++ EH HL VL L+ L K KC+F ++ FLG+ + + ++
Subjt: VFIDDILVYSKTVVEHEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSEGVS
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