; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc11g0300951 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0300951
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr11:21185887..21187602
RNA-Seq ExpressionCmc11g0300951
SyntenyCmc11g0300951
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035890.1 pol protein [Cucumis melo var. makuwa]6.9e-29087.04Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +MSF LTNAPAV MDLMN+VFKDFLD FVIVFIDDIL+YSKIE E+E+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSS+GVS+DPAKIE VT+
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY
        WPR STV+EI SFLGLAGYYRRFVEDFSRIA+PLTQLTRKGTPFVW+PACESSFQELKQKLV+APVLTVPDGSG FVIYSDASK+GLGCVLMQQGKVVAY
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY

Query:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT
        AS QLK HEQNYPTHDLELA VVFALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELNMRQRR LELVKDYD E+LYHPGKANVVA+ALSRKVAHSA LIT
Subjt:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT

Query:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM
        KQ PLLRDFERAEIAVSV EV +QLAQL +QPTLRQ+II AQLNDPYL EK  +VE  QGEDFSISSDDGL F+GRLCVPEDSAVK+ELLTEAHSSPFTM
Subjt:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM

Query:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT
        HP STKMYQDLR  YWWR MKREVADFVSRCLVC QVKAPRQ P GLLQPL VP  KWESVSMDFITGLP+TLKGYTVIWVVVDR+TKS HF+P KSTYT
Subjt:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        ASKWGQLYMTEIVRLHGVPV IISDRDARF SKFWKGLQLAL TRLDFST  HPQTDGQ ERLNQ+LEDML
Subjt:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

KAA0040942.1 pol protein [Cucumis melo var. makuwa]5.9e-28987.02Show/hide
Query:  MSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTSW
        MSF LTNAPAVFMDLMN VFKDFLD FVIVFIDDIL+YSK E E+E+HLHQVL TLRANKLYAKFFKCEFWL+KV+FLGHVVSS+GVS+DPAKIE VT+W
Subjt:  MSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTSW

Query:  PRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAYA
        PR STV+EI SFLGLAGYYRRFVEDFSRIA+PLTQLTRKGTPFVW+PACE SFQELKQKLV+APVLTVPDGSG FVIYSDASK+GLGCVLMQQGKVVAYA
Subjt:  PRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAYA

Query:  SHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLITK
        S QLK HEQNYPTHDLELA VV ALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELNMRQRR LELVKDYD E+LYHPGKANVVA+ALSRKVAHSA LITK
Subjt:  SHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLITK

Query:  QAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTMH
        Q PLLRDFERAEIAVSV EV +QLAQL +QPTLRQ+II AQLNDPYL EK  +VE  QGEDFSISSDDGL F+GRLCVPEDSAVK ELLTEAHSSPFTMH
Subjt:  QAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTMH

Query:  PRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYTA
        P STKMYQDLR  YWWR MKREVADFVSRCLVC QVKAPRQ P GLLQPL VP  KWESVSMDFITGLP+TLKG+TVIWVVVDR+TKS HF+P KSTYTA
Subjt:  PRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        SKWGQLYMTEIVRLHGVPV IISDRDARF SKFWKGLQLAL TRLDFSTA HPQTDGQ ERLNQ+LEDML
Subjt:  SKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

KAA0050760.1 pol protein [Cucumis melo var. makuwa]6.5e-28886.16Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +MSF LTNAPAVFMDLMN+VFKDFLD FVIVFIDDIL+YSK E ++E+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSS+GVS+DPAKIE VT+
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY
        WPR STV+EI SFLGLAGYYRRFVEDFSRIA+PLTQLTRKGTPFVW+PACE SFQELKQKLV+APVLTVPDGSG FVIYSDASK+GLGCVLMQQGKVVAY
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY

Query:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT
        AS QLK HEQNYPTHDLELA VVFALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELNMRQRR LELVKDYD E+LYHPGKANVVA+ALSRKVAHSA LIT
Subjt:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT

Query:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM
        KQ PLLRDFERAEIAVSV EV +QLAQL +QPTLRQ+II AQL+DPYL EK  +VE EQGE FSISSDDGL F+GRLCVPEDSAVK ELLTEAHSSPFTM
Subjt:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM

Query:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT
        HP STKMYQDLR  YWWR MKR+VADFVSRCLVC QVKAPRQ P GLLQPL VP  KWESVSMDFITGLP+TLKGYTVIWVVVDR+TKS HF+P KSTYT
Subjt:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        ASKWGQLYMTEIVRLHGVPV I+SDRDARF SKFWKGLQ+AL TRLDFSTA HPQTDGQ ERLNQ+LEDML
Subjt:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

KAA0056636.1 pol protein [Cucumis melo var. makuwa]1.3e-28886.51Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +MSF LTNAPAVFMDLMN+VFKDFLD FVIVFIDDIL+YSK E E+E+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSS+GVS+DPAK E VT+
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY
        WPR STV+EI SFLGLAGYYRRFVEDFSRIA+PLTQLTRKGTPFVW+PACESSFQ+LKQKLV+APVLTVPDGSG FVIYSDASK+GLGCVLMQQGKVVAY
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY

Query:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT
        AS QLK HEQNYPTHDLELA VVFALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELNMRQRR LELVKDYDYE+LYHPGKANVVA+ALSRKVAHSA LIT
Subjt:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT

Query:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM
        KQ PLLRDFERAEIAVSV EV +QLAQ  +QPTLRQ+II  QLNDPYL EK  +VE  QGEDFSISSDDGL F+GRLCVPEDSAVK ELLTEAHSSPFTM
Subjt:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM

Query:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT
        HP STKMYQDLR  YWWR MKREVADFVSRCLVC QVKAPRQ P GLLQPL VP  KWESVSMDFITGLP+TLKGYTVIWVVVDR+TKS HF+P KSTYT
Subjt:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        ASKWGQLYMTEIVRLHGVPV I+SDRDARF SKFWKGLQLAL TRLDFSTA HPQTDGQ ERLNQ+LEDML
Subjt:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

KAA0063098.1 pol protein [Cucumis melo var. makuwa]6.5e-28886.51Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +MSF LTNAPAVFMDLMN+VFKDFLD FVIVFIDDIL+YSK E E+E+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSS+GVS+DPAKIE VT+
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY
        WPR STV+EI SFLGLAGYYRRFVEDFSRIA+PLTQLTRKGTPFVW+PACE SFQELKQKLV+APVLTVPDGSG FVIYSDASK+ LGCVLMQQGKVVAY
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY

Query:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT
        AS QLK+HEQNYPTHDLELA VVFALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELNMRQRR LELVKDYD E+LYHPGKANVVA+ALSRKVAHSA LIT
Subjt:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT

Query:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM
        KQ PLLRDFERAEI VSV EV +QLAQL +QPTLRQ+II AQLNDPYL EK  +VE  QGEDFSISSDDGL F+GRLCVPEDSAVK ELLTEAHSSPFTM
Subjt:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM

Query:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT
        HP STKMYQDLR  YWWR MKREVADFVSRCLVC QVKAPRQ P GLLQPL VP  KWESVSMDFITGLP+T KGYTVIWVVVDR+TKS HF+P KSTYT
Subjt:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        ASKWGQLYMTEIVRLHGVPV IISDRDARF SKFWKGLQLAL TRLDFSTA HPQTDGQ ERLNQ+LEDML
Subjt:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

TrEMBL top hitse value%identityAlignment
A0A5A7SXW6 Reverse transcriptase3.4e-29087.04Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +MSF LTNAPAV MDLMN+VFKDFLD FVIVFIDDIL+YSKIE E+E+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSS+GVS+DPAKIE VT+
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY
        WPR STV+EI SFLGLAGYYRRFVEDFSRIA+PLTQLTRKGTPFVW+PACESSFQELKQKLV+APVLTVPDGSG FVIYSDASK+GLGCVLMQQGKVVAY
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY

Query:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT
        AS QLK HEQNYPTHDLELA VVFALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELNMRQRR LELVKDYD E+LYHPGKANVVA+ALSRKVAHSA LIT
Subjt:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT

Query:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM
        KQ PLLRDFERAEIAVSV EV +QLAQL +QPTLRQ+II AQLNDPYL EK  +VE  QGEDFSISSDDGL F+GRLCVPEDSAVK+ELLTEAHSSPFTM
Subjt:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM

Query:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT
        HP STKMYQDLR  YWWR MKREVADFVSRCLVC QVKAPRQ P GLLQPL VP  KWESVSMDFITGLP+TLKGYTVIWVVVDR+TKS HF+P KSTYT
Subjt:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        ASKWGQLYMTEIVRLHGVPV IISDRDARF SKFWKGLQLAL TRLDFST  HPQTDGQ ERLNQ+LEDML
Subjt:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

A0A5A7TBV4 Pol protein2.8e-28987.02Show/hide
Query:  MSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTSW
        MSF LTNAPAVFMDLMN VFKDFLD FVIVFIDDIL+YSK E E+E+HLHQVL TLRANKLYAKFFKCEFWL+KV+FLGHVVSS+GVS+DPAKIE VT+W
Subjt:  MSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTSW

Query:  PRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAYA
        PR STV+EI SFLGLAGYYRRFVEDFSRIA+PLTQLTRKGTPFVW+PACE SFQELKQKLV+APVLTVPDGSG FVIYSDASK+GLGCVLMQQGKVVAYA
Subjt:  PRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAYA

Query:  SHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLITK
        S QLK HEQNYPTHDLELA VV ALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELNMRQRR LELVKDYD E+LYHPGKANVVA+ALSRKVAHSA LITK
Subjt:  SHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLITK

Query:  QAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTMH
        Q PLLRDFERAEIAVSV EV +QLAQL +QPTLRQ+II AQLNDPYL EK  +VE  QGEDFSISSDDGL F+GRLCVPEDSAVK ELLTEAHSSPFTMH
Subjt:  QAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTMH

Query:  PRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYTA
        P STKMYQDLR  YWWR MKREVADFVSRCLVC QVKAPRQ P GLLQPL VP  KWESVSMDFITGLP+TLKG+TVIWVVVDR+TKS HF+P KSTYTA
Subjt:  PRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        SKWGQLYMTEIVRLHGVPV IISDRDARF SKFWKGLQLAL TRLDFSTA HPQTDGQ ERLNQ+LEDML
Subjt:  SKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

A0A5A7UQP9 Pol protein6.3e-28986.51Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +MSF LTNAPAVFMDLMN+VFKDFLD FVIVFIDDIL+YSK E E+E+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSS+GVS+DPAK E VT+
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY
        WPR STV+EI SFLGLAGYYRRFVEDFSRIA+PLTQLTRKGTPFVW+PACESSFQ+LKQKLV+APVLTVPDGSG FVIYSDASK+GLGCVLMQQGKVVAY
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY

Query:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT
        AS QLK HEQNYPTHDLELA VVFALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELNMRQRR LELVKDYDYE+LYHPGKANVVA+ALSRKVAHSA LIT
Subjt:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT

Query:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM
        KQ PLLRDFERAEIAVSV EV +QLAQ  +QPTLRQ+II  QLNDPYL EK  +VE  QGEDFSISSDDGL F+GRLCVPEDSAVK ELLTEAHSSPFTM
Subjt:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM

Query:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT
        HP STKMYQDLR  YWWR MKREVADFVSRCLVC QVKAPRQ P GLLQPL VP  KWESVSMDFITGLP+TLKGYTVIWVVVDR+TKS HF+P KSTYT
Subjt:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        ASKWGQLYMTEIVRLHGVPV I+SDRDARF SKFWKGLQLAL TRLDFSTA HPQTDGQ ERLNQ+LEDML
Subjt:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

A0A5A7V4E4 Reverse transcriptase3.1e-28886.87Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +MSF LTNAPAVFMDLMN+VFKDFLD FVIVFIDDIL+YSK E E+E+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSS+GVS+DPAKIE VT+
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY
        WPR STV+EI SFLGLAGYYRRFVEDFSRIA+PLTQLTRKGTPFVW+PACESSFQELKQKLV APVLTVPDGSG FVIYSDASK+GLGCVLMQQGKVVAY
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY

Query:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT
        AS QLK HEQNYPTHDLELA VVFALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELNMRQRR LELVKDYD E+LYHPGKANVVA+ALSRKVAHSA LIT
Subjt:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT

Query:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM
        KQ PLLRDFERAEIAVSV EV +QLAQL +QPTLRQ+II AQLNDPYL EK  +VE  QGEDFSIS DDGL F+GRLCVPEDSAVK ELLTEAHSS FTM
Subjt:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM

Query:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT
        HP STKMYQDLR  YWWR MKREVADFVSRCLVC QVKAPRQ P GLLQPL VP  KWESVSMDFITGLP+TLKGYTVIWVVVDR+TKS HF+P KSTYT
Subjt:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        ASKWGQLYMTEIVRLHGVPV IISDRDARF SKFWKGLQLAL TRLDFST  HPQTDGQIERLNQ+LEDML
Subjt:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

A0A5A7VG30 Reverse transcriptase3.1e-28886.51Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +MSF LTNAPAVFMDLMN+VFKDFLD FVIVFIDDIL+YSK E E+E+HLHQVL TLRANKLYAKF KCEFWL+KV+FLGHVVSS+GVS+DPAKIE VT+
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY
        WPR STV+EI SFLGLAGYYRRFVEDFSRIA PLTQLTRKGTPFVW+PACE SFQELKQKLV+APVLTVPDGSG FVIYSDASK+GL CVLMQQGKVVAY
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAY

Query:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT
        AS QLK HEQNYPTHDLELA VVFALKIWRHYLYGEKIQI+TDHKSLKYFFT+KELN+RQRR LELVKDYD E+LYHPGKANVVA+ALSRKVAHSA LIT
Subjt:  ASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLIT

Query:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM
        KQ PLLRDFERAEIAVSV EV ++LAQL +QPTLRQ+II AQLNDPYL EK  +VE EQGEDFSISSDDGL F+GRLCVPEDSAVK ELLTEAHSSPFTM
Subjt:  KQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTM

Query:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT
        HP STKMYQDLR  YWWR MKREVADFVSRCLVC QVKAPRQ P GLLQPL VP  KWE+VSMDFITGLP+TLKGYTVIWVVVDR+TKS HF+P KSTYT
Subjt:  HPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYT

Query:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
        ASKWGQLYMTEIVRLHGVPV IISDRDARF SKFWKGLQLAL TRLDFSTA HPQTDGQ ERLNQ+LEDML
Subjt:  ASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein8.8e-7830.76Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +M + ++ APA F   +N +  +  +  V+ ++DDIL++SK E E+  H+  VL  L+   L     KCEF   +V F+G+ +S KG +     I+ V  
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----
        W +     E+  FLG   Y R+F+   S++ +PL  L +K   + W P    + + +KQ LVS PVL   D S   ++ +DAS   +G VL Q+      
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----

Query:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK
          V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +I TDH++L    T +    N R  R    ++D+++E+ Y PG AN +A+ALSR 
Subjt:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK

Query:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL
              ++ +  P+ +D E   I        + + Q+ I    + +++    ND  L+  +LL   ++  + +I   DGL  + +  + +P D+ +   +
Subjt:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL

Query:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS
        + + H     +HP    +   + R + W+ +++++ ++V  C  C   K+   KP G LQP+   E  WES+SMDFIT LP +  GY  ++VVVDR +K 
Subjt:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS

Query:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
           +P   + TA +  +++   ++   G P  II+D D  F S+ WK      +  + FS    PQTDGQ ER NQ +E +L
Subjt:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

P0CT35 Transposon Tf2-2 polyprotein8.8e-7830.76Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +M + ++ APA F   +N +  +  +  V+ ++DDIL++SK E E+  H+  VL  L+   L     KCEF   +V F+G+ +S KG +     I+ V  
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----
        W +     E+  FLG   Y R+F+   S++ +PL  L +K   + W P    + + +KQ LVS PVL   D S   ++ +DAS   +G VL Q+      
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----

Query:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK
          V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +I TDH++L    T +    N R  R    ++D+++E+ Y PG AN +A+ALSR 
Subjt:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK

Query:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL
              ++ +  P+ +D E   I        + + Q+ I    + +++    ND  L+  +LL   ++  + +I   DGL  + +  + +P D+ +   +
Subjt:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL

Query:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS
        + + H     +HP    +   + R + W+ +++++ ++V  C  C   K+   KP G LQP+   E  WES+SMDFIT LP +  GY  ++VVVDR +K 
Subjt:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS

Query:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
           +P   + TA +  +++   ++   G P  II+D D  F S+ WK      +  + FS    PQTDGQ ER NQ +E +L
Subjt:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

P0CT36 Transposon Tf2-3 polyprotein8.8e-7830.76Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +M + ++ APA F   +N +  +  +  V+ ++DDIL++SK E E+  H+  VL  L+   L     KCEF   +V F+G+ +S KG +     I+ V  
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----
        W +     E+  FLG   Y R+F+   S++ +PL  L +K   + W P    + + +KQ LVS PVL   D S   ++ +DAS   +G VL Q+      
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----

Query:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK
          V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +I TDH++L    T +    N R  R    ++D+++E+ Y PG AN +A+ALSR 
Subjt:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK

Query:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL
              ++ +  P+ +D E   I        + + Q+ I    + +++    ND  L+  +LL   ++  + +I   DGL  + +  + +P D+ +   +
Subjt:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL

Query:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS
        + + H     +HP    +   + R + W+ +++++ ++V  C  C   K+   KP G LQP+   E  WES+SMDFIT LP +  GY  ++VVVDR +K 
Subjt:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS

Query:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
           +P   + TA +  +++   ++   G P  II+D D  F S+ WK      +  + FS    PQTDGQ ER NQ +E +L
Subjt:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

P0CT37 Transposon Tf2-4 polyprotein8.8e-7830.76Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +M + ++ APA F   +N +  +  +  V+ ++DDIL++SK E E+  H+  VL  L+   L     KCEF   +V F+G+ +S KG +     I+ V  
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----
        W +     E+  FLG   Y R+F+   S++ +PL  L +K   + W P    + + +KQ LVS PVL   D S   ++ +DAS   +G VL Q+      
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----

Query:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK
          V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +I TDH++L    T +    N R  R    ++D+++E+ Y PG AN +A+ALSR 
Subjt:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK

Query:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL
              ++ +  P+ +D E   I        + + Q+ I    + +++    ND  L+  +LL   ++  + +I   DGL  + +  + +P D+ +   +
Subjt:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL

Query:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS
        + + H     +HP    +   + R + W+ +++++ ++V  C  C   K+   KP G LQP+   E  WES+SMDFIT LP +  GY  ++VVVDR +K 
Subjt:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS

Query:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
           +P   + TA +  +++   ++   G P  II+D D  F S+ WK      +  + FS    PQTDGQ ER NQ +E +L
Subjt:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

P0CT41 Transposon Tf2-12 polyprotein8.8e-7830.76Show/hide
Query:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS
        +M + ++ APA F   +N +  +  +  V+ ++DDIL++SK E E+  H+  VL  L+   L     KCEF   +V F+G+ +S KG +     I+ V  
Subjt:  MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTS

Query:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----
        W +     E+  FLG   Y R+F+   S++ +PL  L +K   + W P    + + +KQ LVS PVL   D S   ++ +DAS   +G VL Q+      
Subjt:  WPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGK----

Query:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK
          V Y S ++   + NY   D E+  ++ +LK WRHYL    E  +I TDH++L    T +    N R  R    ++D+++E+ Y PG AN +A+ALSR 
Subjt:  -VVAYASHQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTEKE--LNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRK

Query:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL
              ++ +  P+ +D E   I        + + Q+ I    + +++    ND  L+  +LL   ++  + +I   DGL  + +  + +P D+ +   +
Subjt:  VAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLIIQPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGR--LCVPEDSAVKIEL

Query:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS
        + + H     +HP    +   + R + W+ +++++ ++V  C  C   K+   KP G LQP+   E  WES+SMDFIT LP +  GY  ++VVVDR +K 
Subjt:  LTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAPRQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKS

Query:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML
           +P   + TA +  +++   ++   G P  II+D D  F S+ WK      +  + FS    PQTDGQ ER NQ +E +L
Subjt:  THFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFSTALHPQTDGQIERLNQVLEDML

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein2.8e-2339.39Show/hide
Query:  DHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLG--HVVSSKGVSIDPAKIEVVTSWPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFV
        +HL  VL     ++ YA   KC F   ++++LG  H++S +GVS DPAK+E +  WP      E+  FLGL GYYRRFV+++ +I  PLT+L +K +   
Subjt:  DHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLG--HVVSSKGVSIDPAKIEVVTSWPRSSTVNEICSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFV

Query:  WNPACESSFQELKQKLVSAPVLTVPDGSGAFV
        W      +F+ LK  + + PVL +PD    FV
Subjt:  WNPACESSFQELKQKLVSAPVLTVPDGSGAFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCCTTTGATTTGACTAATGCTCCCGCAGTATTCATGGACTTGATGAACAAAGTGTTTAAGGACTTCTTAGACAGGTTTGTTATAGTTTTCATTGACGATATATT
GGTTTACTCCAAGATAGAGGTCGAGTATGAGGATCACTTGCATCAAGTTTTGGGGACTCTTCGAGCTAATAAGTTGTATGCCAAGTTTTTCAAGTGTGAGTTCTGGTTGA
AGAAGGTATCTTTTCTTGGACATGTGGTGTCCAGTAAGGGAGTTTCTATAGACCCAGCAAAGATTGAAGTTGTTACTAGTTGGCCTCGATCGTCTACAGTCAATGAGATC
TGTAGTTTTCTGGGTCTAGCAGGTTATTATAGGAGGTTCGTGGAAGACTTTTCTCGTATAGCTAATCCCTTGACTCAGTTGACCAGGAAGGGGACTCCATTTGTTTGGAA
CCCAGCTTGTGAGTCTAGTTTCCAGGAGCTCAAGCAGAAGCTTGTGTCCGCACCAGTCCTTACAGTGCCAGATGGGTCTGGGGCCTTTGTAATCTACAGTGATGCCTCCA
AAAGAGGGTTGGGTTGCGTGTTAATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCATCAATTGAAGAGTCATGAGCAGAACTATCCTACCCATGACTTAGAGTTGGCA
GTAGTGGTTTTTGCACTAAAGATATGGAGACACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTAAAGTACTTCTTCACCGAGAAGGAGTTGAA
CATGAGACAGAGGAGATTGCTTGAGTTAGTGAAGGATTATGACTACGAGGTTTTGTATCACCCAGGTAAGGCAAACGTAGTAGCTAACGCGTTGAGTAGGAAGGTTGCAC
ATTCAGCAACGCTTATCACCAAACAAGCTCCTTTACTAAGAGATTTCGAGAGAGCTGAGATTGCAGTCTCAGTAAGGGAAGTGGCCTCGCAGTTGGCTCAGTTGATCATT
CAGCCGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCATTTATTAGTAGAGGCAGAGCAAGGTGAGGATTTCTCCATATCCTC
TGATGATGGACTTACTTTCGATGGACGTTTGTGCGTGCCAGAAGACAGTGCAGTCAAGATAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACTATGCACCCTAGAA
GTACGAAGATGTACCAAGACTTGAGGCGTGCTTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAGACTTCGTCAGTAGATGTTTGGTGTGCCTGCAGGTGAAGGCACCT
AGACAGAAGCCAGGAGGGTTGCTGCAACCCTTGGGTGTACCAGAATTGAAATGGGAGAGTGTATCGATGGACTTCATTACAGGACTGCCCAGAACTCTAAAGGGCTATAC
AGTGATCTGGGTTGTTGTCGACAGAGTCACAAAGTCAACCCATTTCATTCCACGGAAGTCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACGGAGATAGTGA
GACTGCATGGAGTACCCGTATTCATCATTTCAGACAGAGATGCTCGTTTCAAATCGAAGTTCTGGAAAGGACTTCAGCTAGCCTTGGACACGAGGTTAGACTTCAGTACA
GCTCTTCATCCTCAGACTGATGGTCAAATAGAGAGGTTGAACCAAGTTTTGGAAGATATGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTCCTTTGATTTGACTAATGCTCCCGCAGTATTCATGGACTTGATGAACAAAGTGTTTAAGGACTTCTTAGACAGGTTTGTTATAGTTTTCATTGACGATATATT
GGTTTACTCCAAGATAGAGGTCGAGTATGAGGATCACTTGCATCAAGTTTTGGGGACTCTTCGAGCTAATAAGTTGTATGCCAAGTTTTTCAAGTGTGAGTTCTGGTTGA
AGAAGGTATCTTTTCTTGGACATGTGGTGTCCAGTAAGGGAGTTTCTATAGACCCAGCAAAGATTGAAGTTGTTACTAGTTGGCCTCGATCGTCTACAGTCAATGAGATC
TGTAGTTTTCTGGGTCTAGCAGGTTATTATAGGAGGTTCGTGGAAGACTTTTCTCGTATAGCTAATCCCTTGACTCAGTTGACCAGGAAGGGGACTCCATTTGTTTGGAA
CCCAGCTTGTGAGTCTAGTTTCCAGGAGCTCAAGCAGAAGCTTGTGTCCGCACCAGTCCTTACAGTGCCAGATGGGTCTGGGGCCTTTGTAATCTACAGTGATGCCTCCA
AAAGAGGGTTGGGTTGCGTGTTAATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCATCAATTGAAGAGTCATGAGCAGAACTATCCTACCCATGACTTAGAGTTGGCA
GTAGTGGTTTTTGCACTAAAGATATGGAGACACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTAAAGTACTTCTTCACCGAGAAGGAGTTGAA
CATGAGACAGAGGAGATTGCTTGAGTTAGTGAAGGATTATGACTACGAGGTTTTGTATCACCCAGGTAAGGCAAACGTAGTAGCTAACGCGTTGAGTAGGAAGGTTGCAC
ATTCAGCAACGCTTATCACCAAACAAGCTCCTTTACTAAGAGATTTCGAGAGAGCTGAGATTGCAGTCTCAGTAAGGGAAGTGGCCTCGCAGTTGGCTCAGTTGATCATT
CAGCCGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCATTTATTAGTAGAGGCAGAGCAAGGTGAGGATTTCTCCATATCCTC
TGATGATGGACTTACTTTCGATGGACGTTTGTGCGTGCCAGAAGACAGTGCAGTCAAGATAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACTATGCACCCTAGAA
GTACGAAGATGTACCAAGACTTGAGGCGTGCTTATTGGTGGAGGAACATGAAGAGAGAAGTGGCAGACTTCGTCAGTAGATGTTTGGTGTGCCTGCAGGTGAAGGCACCT
AGACAGAAGCCAGGAGGGTTGCTGCAACCCTTGGGTGTACCAGAATTGAAATGGGAGAGTGTATCGATGGACTTCATTACAGGACTGCCCAGAACTCTAAAGGGCTATAC
AGTGATCTGGGTTGTTGTCGACAGAGTCACAAAGTCAACCCATTTCATTCCACGGAAGTCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACGGAGATAGTGA
GACTGCATGGAGTACCCGTATTCATCATTTCAGACAGAGATGCTCGTTTCAAATCGAAGTTCTGGAAAGGACTTCAGCTAGCCTTGGACACGAGGTTAGACTTCAGTACA
GCTCTTCATCCTCAGACTGATGGTCAAATAGAGAGGTTGAACCAAGTTTTGGAAGATATGCTGTGA
Protein sequenceShow/hide protein sequence
MMSFDLTNAPAVFMDLMNKVFKDFLDRFVIVFIDDILVYSKIEVEYEDHLHQVLGTLRANKLYAKFFKCEFWLKKVSFLGHVVSSKGVSIDPAKIEVVTSWPRSSTVNEI
CSFLGLAGYYRRFVEDFSRIANPLTQLTRKGTPFVWNPACESSFQELKQKLVSAPVLTVPDGSGAFVIYSDASKRGLGCVLMQQGKVVAYASHQLKSHEQNYPTHDLELA
VVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTEKELNMRQRRLLELVKDYDYEVLYHPGKANVVANALSRKVAHSATLITKQAPLLRDFERAEIAVSVREVASQLAQLII
QPTLRQRIIVAQLNDPYLVEKHLLVEAEQGEDFSISSDDGLTFDGRLCVPEDSAVKIELLTEAHSSPFTMHPRSTKMYQDLRRAYWWRNMKREVADFVSRCLVCLQVKAP
RQKPGGLLQPLGVPELKWESVSMDFITGLPRTLKGYTVIWVVVDRVTKSTHFIPRKSTYTASKWGQLYMTEIVRLHGVPVFIISDRDARFKSKFWKGLQLALDTRLDFST
ALHPQTDGQIERLNQVLEDML