| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026117.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.9e-160 | 74.94 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
MQTRRK+KIDY+KM ELLQFRRNNVWTLVSKPEGVNVIGTKW+FKNKIDE GCVTKNKARLVA GYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
Query: IDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
+DFDETFA MDVKSAFLN YLNEEVY+AQPKGFVDSEHPKHVYKLNKA+YGLKQ RAWYD LTV R +GY REEI
Subjt: IDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
Query: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
DKT FIH+KSDQLLVAQIYVDDIIFGGFP DLVNNFINIMQSEFEMS VGELS FLGLQIKQKND IFI+QEKYA+NM+KKF LEQARNKRT AATHVKL
Subjt: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
Query: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRG
TKD +GAEVDHKLYRSIVG+LLYLT SRP+IAY VGI A YQAD RITHLEA+KRILKYVHGT+D MMYSYDTTPTLVGY DAD AGS +DRKSTS G
Subjt: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRG
|
|
| KAA0053137.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.2e-171 | 75.12 | Show/hide |
Query: ISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA------------
++ +E T+NSAL+DEYWLN MQEELLQFRRNNVWTL+SKPEGVNVIGTKW+FKNK DE GCVTKNKARLVA GYTQVEG+DFDETFA
Subjt: ISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA------------
Query: -----------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYV
+DVKS FLNGYLNEEVY+AQPKGFVDSEHPKHVYKLNKA+YGLKQ LRAWYD LTV R +GYSR EIDK LFIH+KSDQLLVAQIYV
Subjt: -----------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYV
Query: DDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGS
DDIIFGGFP DL+NNFINIMQSEFEMSMVGELS FLGLQIKQKNDGIFI+QEKYARNM+KKFGL+QARNKRT AATHVKLTKD +GAEVDHKLYRSIVGS
Subjt: DDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGS
Query: LLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSL
LLYLTASRP+IAY VGI A YQAD RIT LE +KRILKYVHGT+D GMMYSYDTT TLVGY DAD AGS DDRK+
Subjt: LLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSL
Query: STAEAEYIAAGSGCTQLI
EAEYIAAGSGCTQLI
Subjt: STAEAEYIAAGSGCTQLI
|
|
| KAA0066164.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.3e-165 | 72.15 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
MQTRRKEKIDYMKMVADLCYIST EPSTV+SALRDEYWLNAMQEELLQFR+NNVWTLVSKPEGVNVIGTKWVFKNK DEAGCVTKNKA+LVA GYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
Query: IDFDETFAS-----------------------MDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
IDFDETFAS MDVKSAFL+GYLNEEVY+AQPKGFVDSEHPKH+YKLNKA+YGLKQ RAWYD LTV R KGYSR EI
Subjt: IDFDETFAS-----------------------MDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
Query: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
DKTLFI +KSDQLLVAQIYVDDIIF GFP DLVNNFI EFEMSMVGELS FLGLQIKQKND IFI+QEKYARNM+KKFGLEQARNKRT AATHVKL
Subjt: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
Query: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGC
TKD + +EVDHKLYRSI AD RITHLEA+KRILKYVHGT+D GMMYSYDTTPTLVGY DA+ AGSTDD K+
Subjt: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGC
Query: FFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLI
EA+Y+AAGSGCTQLI
Subjt: FFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLI
|
|
| TYK08028.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.4e-167 | 74.7 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
MQTRRK+KIDY+KMVA+LCYIST E TV+SAL+DEYWLNAMQEELLQ+R+NNVWTLVSKPEGVNVIGTK++FKNK DE GCVTKNKARLVA GYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
Query: IDFDETFASMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDI
+DFDETF+ MDVKSAFLNGYLNEEVY+AQPKGFVDSEHPKHVYKLNKA+Y L KKS+QLL+AQIYVDDI
Subjt: IDFDETFASMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDI
Query: IFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY
IFGGFPQDLVNNFIN MQSEF+MSM+GELS FLGLQIKQKNDGIFI+QEKYARNM+KKFGLEQARNKRT AATHVKLTKD GAEVDHKLYRSIVGSLLY
Subjt: IFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY
Query: LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTA
LTASRP+IAYA+GI A YQAD ITHLE +KRILKYVHGT+D GMMYSYDTTPTLVGY DAD AGSTDDRK
Subjt: LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTA
Query: EAEYIAAGSGCTQLI
EAEYIAAGSGCTQLI
Subjt: EAEYIAAGSGCTQLI
|
|
| TYK11575.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 8.4e-160 | 74.69 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
MQTRRK+KIDY+KM ELLQFRRNNVWTLVSKPEGVNVIGTKW+FKNKIDE GCVTKNKARLVA GYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
Query: IDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
+DFDETFA MDVKSAFLN YLNEEVY+AQPKGFVDSEHPKHVYKLNKA+YGLKQ RAWYD LT R +GY REEI
Subjt: IDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
Query: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
DKT FIH+KSDQLLVAQIYVDDIIFGGFP DLVNNFINIMQSEFEMS VGELS FLGLQIKQKND IFI+QEKYA+NM+KKF LEQARNKRT AATHVKL
Subjt: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
Query: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRG
TKD +GAEVDHKLYRSIVG+LLYLT SRP+IAY VGI A YQAD RITHLEA+KRILKYVHGT+D MMYSYDTTPTLVGY DAD AGS +DRKSTS G
Subjt: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRG
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SN07 Gag-pol polyprotein | 1.4e-160 | 74.94 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
MQTRRK+KIDY+KM ELLQFRRNNVWTLVSKPEGVNVIGTKW+FKNKIDE GCVTKNKARLVA GYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
Query: IDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
+DFDETFA MDVKSAFLN YLNEEVY+AQPKGFVDSEHPKHVYKLNKA+YGLKQ RAWYD LTV R +GY REEI
Subjt: IDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
Query: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
DKT FIH+KSDQLLVAQIYVDDIIFGGFP DLVNNFINIMQSEFEMS VGELS FLGLQIKQKND IFI+QEKYA+NM+KKF LEQARNKRT AATHVKL
Subjt: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
Query: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRG
TKD +GAEVDHKLYRSIVG+LLYLT SRP+IAY VGI A YQAD RITHLEA+KRILKYVHGT+D MMYSYDTTPTLVGY DAD AGS +DRKSTS G
Subjt: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRG
|
|
| A0A5D3BPB3 Gag-pol polyprotein | 6.0e-172 | 75.12 | Show/hide |
Query: ISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA------------
++ +E T+NSAL+DEYWLN MQEELLQFRRNNVWTL+SKPEGVNVIGTKW+FKNK DE GCVTKNKARLVA GYTQVEG+DFDETFA
Subjt: ISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA------------
Query: -----------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYV
+DVKS FLNGYLNEEVY+AQPKGFVDSEHPKHVYKLNKA+YGLKQ LRAWYD LTV R +GYSR EIDK LFIH+KSDQLLVAQIYV
Subjt: -----------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYV
Query: DDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGS
DDIIFGGFP DL+NNFINIMQSEFEMSMVGELS FLGLQIKQKNDGIFI+QEKYARNM+KKFGL+QARNKRT AATHVKLTKD +GAEVDHKLYRSIVGS
Subjt: DDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGS
Query: LLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSL
LLYLTASRP+IAY VGI A YQAD RIT LE +KRILKYVHGT+D GMMYSYDTT TLVGY DAD AGS DDRK+
Subjt: LLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSL
Query: STAEAEYIAAGSGCTQLI
EAEYIAAGSGCTQLI
Subjt: STAEAEYIAAGSGCTQLI
|
|
| A0A5D3CA21 Gag-pol polyprotein | 1.2e-167 | 74.7 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
MQTRRK+KIDY+KMVA+LCYIST E TV+SAL+DEYWLNAMQEELLQ+R+NNVWTLVSKPEGVNVIGTK++FKNK DE GCVTKNKARLVA GYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
Query: IDFDETFASMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDI
+DFDETF+ MDVKSAFLNGYLNEEVY+AQPKGFVDSEHPKHVYKLNKA+Y L KKS+QLL+AQIYVDDI
Subjt: IDFDETFASMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDI
Query: IFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY
IFGGFPQDLVNNFIN MQSEF+MSM+GELS FLGLQIKQKNDGIFI+QEKYARNM+KKFGLEQARNKRT AATHVKLTKD GAEVDHKLYRSIVGSLLY
Subjt: IFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY
Query: LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTA
LTASRP+IAYA+GI A YQAD ITHLE +KRILKYVHGT+D GMMYSYDTTPTLVGY DAD AGSTDDRK
Subjt: LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTA
Query: EAEYIAAGSGCTQLI
EAEYIAAGSGCTQLI
Subjt: EAEYIAAGSGCTQLI
|
|
| A0A5D3CJ17 Gag-pol polyprotein | 4.1e-160 | 74.69 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
MQTRRK+KIDY+KM ELLQFRRNNVWTLVSKPEGVNVIGTKW+FKNKIDE GCVTKNKARLVA GYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
Query: IDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
+DFDETFA MDVKSAFLN YLNEEVY+AQPKGFVDSEHPKHVYKLNKA+YGLKQ RAWYD LT R +GY REEI
Subjt: IDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
Query: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
DKT FIH+KSDQLLVAQIYVDDIIFGGFP DLVNNFINIMQSEFEMS VGELS FLGLQIKQKND IFI+QEKYA+NM+KKF LEQARNKRT AATHVKL
Subjt: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
Query: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRG
TKD +GAEVDHKLYRSIVG+LLYLT SRP+IAY VGI A YQAD RITHLEA+KRILKYVHGT+D MMYSYDTTPTLVGY DAD AGS +DRKSTS G
Subjt: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRG
|
|
| A0A5D3CXU0 Gag-pol polyprotein | 6.5e-166 | 72.15 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
MQTRRKEKIDYMKMVADLCYIST EPSTV+SALRDEYWLNAMQEELLQFR+NNVWTLVSKPEGVNVIGTKWVFKNK DEAGCVTKNKA+LVA GYTQVEG
Subjt: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEG
Query: IDFDETFAS-----------------------MDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
IDFDETFAS MDVKSAFL+GYLNEEVY+AQPKGFVDSEHPKH+YKLNKA+YGLKQ RAWYD LTV R KGYSR EI
Subjt: IDFDETFAS-----------------------MDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEI
Query: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
DKTLFI +KSDQLLVAQIYVDDIIF GFP DLVNNFI EFEMSMVGELS FLGLQIKQKND IFI+QEKYARNM+KKFGLEQARNKRT AATHVKL
Subjt: DKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKL
Query: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGC
TKD + +EVDHKLYRSI AD RITHLEA+KRILKYVHGT+D GMMYSYDTTPTLVGY DA+ AGSTDD K+
Subjt: TKDNDGAEVDHKLYRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGC
Query: FFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLI
EA+Y+AAGSGCTQLI
Subjt: FFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLI
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.8e-60 | 33.17 | Show/hide |
Query: WLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA-----------------------SMDVKS
W A+ EL + NN WT+ +PE N++ ++WVF K +E G + KARLVA G+TQ ID++ETFA MDVK+
Subjt: WLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA-----------------------SMDVKS
Query: AFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKS--DQLLVAQIYVDDIIFGGFPQDLVNN
AFLNG L EE+Y+ P+G S + +V KLNKA+YGLKQ R W++ ++ + +D+ ++I K ++ + +YVDD++ +NN
Subjt: AFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKS--DQLLVAQIYVDDIIFGGFPQDLVNN
Query: FINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY-LTASRPNIAYA
F + +F M+ + E+ F+G++I+ + D I+++Q Y + ++ KF +E T + + N + + RS++G L+Y + +RP++ A
Subjt: FINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY-LTASRPNIAYA
Query: VGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTT--PTLVGYYDADLAGSTDDRKSTSRGCF-FFRNNLISWLSKKQNCVSLSTAEAEYIA
V I + Y + + + +KR+L+Y+ GT D+ +++ + ++GY D+D AGS DRKST+ F F NLI W +K+QN V+ S+ EAEY+A
Subjt: VGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTT--PTLVGYYDADLAGSTDDRKSTSRGCF-FFRNNLISWLSKKQNCVSLSTAEAEYIA
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-61 | 34.09 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSAL---RDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQ
+++RR +Y+ + D EP ++ L + AMQEE+ ++N + LV P+G + KWVFK K D + + KARLV G+ Q
Subjt: MQTRRKEKIDYMKMVADLCYISTFEPSTVNSAL---RDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQ
Query: VEGIDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSR
+GIDFDE F+ +DVK+AFL+G L EE+Y+ QP+GF + V KLNK++YGLKQ R WY + + Y +
Subjt: VEGIDFDETFA-----------------------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSR
Query: EEIDKTLFIHKKSD-QLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDG--IFIAQEKYARNMIKKFGLEQARNKRTAA
D ++ + S+ ++ +YVDD++ G + L+ + F+M +G LG++I ++ ++++QEKY ++++F ++ A+ T
Subjt: EEIDKTLFIHKKSD-QLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDG--IFIAQEKYARNMIKKFGLEQARNKRTAA
Query: ATHVKLTKDNDGAEVDHK------LYRSIVGSLLY-LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLA
A H+KL+K V+ K Y S VGSL+Y + +RP+IA+AVG+ + + + H EA+K IL+Y+ GT + + + P L GY DAD+A
Subjt: ATHVKLTKDNDGAEVDHK------LYRSIVGSLLY-LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLA
Query: GSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAA
G D+RKS++ F F ISW SK Q CV+LST EAEYIAA
Subjt: GSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAA
|
|
| P25600 Putative transposon Ty5-1 protein YCL074W | 1.7e-30 | 28.24 | Show/hide |
Query: MDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDL
MDV +AFLN ++E +Y+ QP GFV+ +P +V++L +YGLKQ W + + + G+ R E + L+ SD + +YVDD++ +
Subjt: MDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDG-IFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY-LTASRPN
+ + + M +G++ FLGL I Q ++G I ++ + Y + + + +T L + D Y+SIVG LL+ RP+
Subjt: VNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDG-IFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY-LTASRPN
Query: IAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKK-QNCVSLSTAEAEYIA
I+Y V + + + + R HLE+ +R+L+Y++ T + + Y + L Y DA D ST ++W SKK + + + + EAEYI
Subjt: IAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKK-QNCVSLSTAEAEYIA
Query: A
A
Subjt: A
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-65 | 35.27 | Show/hide |
Query: EPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEG-VNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA---------------
EP T AL+DE W NAM E+ N+ W LV P V ++G +W+F K + G + + KARLVA GY Q G+D+ ETF+
Subjt: EPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEG-VNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA---------------
Query: --------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDI
+DV +AFL G L ++VY++QP GF+D + P +V KL KA+YGLKQ RAWY L G+ D +LF+ ++ ++ +YVDDI
Subjt: --------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDI
Query: IFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY
+ G L++N ++ + F + EL +FLG++ K+ G+ ++Q +Y +++ + + A+ T A KL+ + D YR IVGSL Y
Subjt: IFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY
Query: LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTA
L +RP+I+YAV + + HL+A+KRIL+Y+ GT + G+ T +L Y DAD AG DD ST+ + ++ ISW SKKQ V S+
Subjt: LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTA
Query: EAEYIAAGSGCTQL
EAEY + + +++
Subjt: EAEYIAAGSGCTQL
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.3e-66 | 35.02 | Show/hide |
Query: EPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLV-SKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA---------------
EP T A++D+ W AM E+ N+ W LV P V ++G +W+F K + G + + KARLVA GY Q G+D+ ETF+
Subjt: EPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLV-SKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA---------------
Query: --------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDI
+DV +AFL G L +EVY++QP GFVD + P +V +L KA+YGLKQ RAWY L G+ D +LF+ ++ ++ +YVDDI
Subjt: --------SMDVKSAFLNGYLNEEVYIAQPKGFVDSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQLLVAQIYVDDI
Query: IFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY
+ G L+ + ++ + F + +L +FLG++ K+ G+ ++Q +Y +++ + + A+ T AT KLT + D YR IVGSL Y
Subjt: IFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKLYRSIVGSLLY
Query: LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTA
L +RP+++YAV + Y H A+KR+L+Y+ GT D G+ T +L Y DAD AG TDD ST+ + ++ ISW SKKQ V S+
Subjt: LTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQNCVSLSTA
Query: EAEYIAAGSGCTQL
EAEY + + ++L
Subjt: EAEYIAAGSGCTQL
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 8.3e-65 | 35.34 | Show/hide |
Query: LCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA---------
+C EPST N A W AM +E+ + W + + P IG KWV+K K + G + + KARLVA GYTQ EGIDF ETF+
Subjt: LCYISTFEPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQVEGIDFDETFA---------
Query: --------------SMDVKSAFLNGYLNEEVYIAQPKGFV----DSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQL
+D+ +AFLNG L+EE+Y+ P G+ DS P V L K++YGLKQ R W+ +V G+ + D T F+ +
Subjt: --------------SMDVKSAFLNGYLNEEVYIAQPKGFV----DSEHPKHVYKLNKAVYGLKQTLRAWYDWLTVCWRDKGYSREEIDKTLFIHKKSDQL
Query: LVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKL
L +YVDDII V+ + ++S F++ +G L +FLGL+I + GI I Q KYA +++ + GL + V + + G VD K
Subjt: LVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEVDHKL
Query: YRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSK
YR ++G L+YL +R +I++AV + + R+ H +A+ +IL Y+ GT G+ YS L + DA D R+ST+ C F +LISW SK
Subjt: YRSIVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSK
Query: KQNCVSLSTAEAEYIA
KQ VS S+AEAEY A
Subjt: KQNCVSLSTAEAEYIA
|
|
| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.6e-07 | 32.91 | Show/hide |
Query: LYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGC
+YLT +RP++ +AV + + + SR ++A+ ++L YV GT G+ YS + L + D+D A D R+S + C
Subjt: LYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGC
|
|
| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.0e-30 | 35.75 | Show/hide |
Query: IYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEV-DHKLYRS
+YVDDI+ G L+N I + S F M +G + +FLG+QIK G+F++Q KYA ++ G+ + T +KL A+ D +RS
Subjt: IYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSWFLGLQIKQKNDGIFIAQEKYARNMIKKFGLEQARNKRTAAATHVKLTKDNDGAEV-DHKLYRS
Query: IVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQN
IVG+L YLT +RP+I+YAV I + + + +KR+L+YV GT G+ ++ + + D+D AG T R+ST+ C F N+ISW +K+Q
Subjt: IVGSLLYLTASRPNIAYAVGIYASYQADSRITHLEAIKRILKYVHGTNDIGMMYSYDTTPTLVGYYDADLAGSTDDRKSTSRGCFFFRNNLISWLSKKQN
Query: CVSLSTAEAEYIAAGSGCTQL
VS S+ E EY A +L
Subjt: CVSLSTAEAEYIAAGSGCTQL
|
|
| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 4.5e-18 | 42.74 | Show/hide |
Query: MQTRRKEKIDYMKMVADLCYISTF--EPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQV
M TR K I+ + L +T EP +V AL+D W AMQEEL RN W LV P N++G KWVFK K+ G + + KARLVA G+ Q
Subjt: MQTRRKEKIDYMKMVADLCYISTF--EPSTVNSALRDEYWLNAMQEELLQFRRNNVWTLVSKPEGVNVIGTKWVFKNKIDEAGCVTKNKARLVALGYTQV
Query: EGIDFDETFASMDVKSAFLNGYLN
EGI F ET++ + V++A + LN
Subjt: EGIDFDETFASMDVKSAFLNGYLN
|
|
