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Cmc11g0301431 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0301431
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description50S ribosomal protein L1
Genome locationCMiso1.1chr11:21714076..21718622
RNA-Seq ExpressionCmc11g0301431
SyntenyCmc11g0301431
Gene Ontology termsNA
InterPro domainsIPR016095 - Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR023674 - Ribosomal protein L1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY92169.1 putative glucosamine-fructose-6-phosphate aminotransferase [Actinidia rufa]9.7e-1491.11Show/hide
Query:  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        T CEKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI++PDMMPK
Subjt:  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

GFY92209.1 ribosomal protein L1p/L10e family [Actinidia rufa]9.7e-1491.11Show/hide
Query:  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        T CEKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI++PDMMPK
Subjt:  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

KAA0054392.1 50S ribosomal protein L1 [Cucumis melo var. makuwa]6.9e-6099.21Show/hide
Query:  MLLTQKPSIFVVSSHCRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLLSLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVG
        MLLTQKPSIFVVSSH RVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLLSLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVG
Subjt:  MLLTQKPSIFVVSSHCRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLLSLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVG

Query:  GEDLIEQIKGGFMEFDKLISSPDMMPK
        GEDLIEQIKGGFMEFDKLISSPDMMPK
Subjt:  GEDLIEQIKGGFMEFDKLISSPDMMPK

XP_027354619.1 50S ribosomal protein L1, chloroplastic isoform X3 [Abrus precatorius]6.3e-1395.24Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        EKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

XP_030965667.1 50S ribosomal protein L1, chloroplastic [Quercus lobata]6.3e-1395.24Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        EKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

TrEMBL top hitse value%identityAlignment
A0A1S3TKD3 Ribosomal protein3.1e-1395.24Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        EKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

A0A5A7UF52 50S ribosomal protein L13.3e-6099.21Show/hide
Query:  MLLTQKPSIFVVSSHCRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLLSLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVG
        MLLTQKPSIFVVSSH RVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLLSLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVG
Subjt:  MLLTQKPSIFVVSSHCRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLLSLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVG

Query:  GEDLIEQIKGGFMEFDKLISSPDMMPK
        GEDLIEQIKGGFMEFDKLISSPDMMPK
Subjt:  GEDLIEQIKGGFMEFDKLISSPDMMPK

A0A5D3CGN7 Ribosomal protein3.1e-1395.24Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        EKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

A0A7J0F1T0 Putative glucosamine-fructose-6-phosphate aminotransferase4.7e-1491.11Show/hide
Query:  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        T CEKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI++PDMMPK
Subjt:  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

A0A7J0F1X3 Ribosomal protein4.7e-1491.11Show/hide
Query:  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        T CEKF+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI++PDMMPK
Subjt:  TLCEKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

SwissProt top hitse value%identityAlignment
B8JB73 50S ribosomal protein L19.8e-0967.5Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMM
        +K  EA+ AGAD+VG EDL E+I+GGFM+FDKLI++PDMM
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMM

P49208 50S ribosomal protein L1, chloroplastic (Fragment)1.8e-1592.86Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        E+F+EAKNAGADLVGGEDLIEQIKGGFMEFDKLI+SPDMMPK
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

Q2II81 50S ribosomal protein L19.8e-0967.5Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMM
        +K  EA+ AGAD+VG EDL E+I+GGFM+FDKLI++PDMM
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMM

Q9LE95 50S ribosomal protein L1, chloroplastic1.4e-1073.81Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        +K +EAK AGAD+VGGE+LIEQIKGGFM+FDKLI++ DMM K
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

Q9LY66 50S ribosomal protein L1, chloroplastic4.2e-1280.95Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        EK +EAK+AGAD+VG +DLIEQIKGGFMEFDKLI+SPDMM K
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

Arabidopsis top hitse value%identityAlignment
AT2G42710.1 Ribosomal protein L1p/L10e family2.3e-0551.22Show/hide
Query:  EAKNAGADLVGGEDLIEQI-KGGFMEFDKLISSPDMMPKTF
        +AK AGAD+VGG +LIE+I K G ++FD+ +++P MMP+ +
Subjt:  EAKNAGADLVGGEDLIEQI-KGGFMEFDKLISSPDMMPKTF

AT3G63490.1 Ribosomal protein L1p/L10e family3.0e-1380.95Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        EK +EAK+AGAD+VG +DLIEQIKGGFMEFDKLI+SPDMM K
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK

AT3G63490.2 Ribosomal protein L1p/L10e family3.0e-1380.95Show/hide
Query:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK
        EK +EAK+AGAD+VG +DLIEQIKGGFMEFDKLI+SPDMM K
Subjt:  EKFNEAKNAGADLVGGEDLIEQIKGGFMEFDKLISSPDMMPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTCACGCAAAAACCCTCCATCTTCGTCGTCTCCTCCCATTGCCGTGTCCTCCCTCAACGCCGTCGGCTGCCGCTGCTACACTTAACTTCTCCGTCTTTG
AACGCCACCAGCTGCTACTACCGTTTGGGTTCGGACACCGCTGCTACCGTTTCGGTTCAAACACCGCGTCTCCTCTCCCTCAACACCACTGCTACCATTTTAGTT
CGAACGTCGCGTCTCTTCTCCCTCAACACCGCTACTACCCTTTGTGAAAAATTCAACGAAGCAAAAAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATA
GAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTTCTTCACCAGATATGATGCCTAAGACTTTCAACTGA
mRNA sequenceShow/hide mRNA sequence
CTCCCTAATGCTCCTCACGCAAAAACCCTCCATCTTCGTCGTCTCCTCCCATTGCCGTGTCCTCCCTCAACGCCGTCGGCTGCCGCTGCTACACTTAACTTCTCC
GTCTTTGAACGCCACCAGCTGCTACTACCGTTTGGGTTCGGACACCGCTGCTACCGTTTCGGTTCAAACACCGCGTCTCCTCTCCCTCAACACCACTGCTACCAT
TTTAGTTCGAACGTCGCGTCTCTTCTCCCTCAACACCGCTACTACCCTTTGTGAAAAATTCAACGAAGCAAAAAATGCAGGAGCAGATTTGGTTGGAGGTGAGGA
TTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTTCTTCACCAGATATGATGCCTAAGACTTTCAACTGATGGAAAGGATTTCTTCACTT
CATACAATGAAGTTTATGACAGTTTTGATTTTATGGGCCTATAAGAAAATTAAACCTTCTCAGAGGGATCTATGCCTACGGTTGGTTTTGAGAAGTCATCCGCAA
TTCAATAAAGGAGAATTGTTCCTCTTCGCAAAGGGCTTGATGTAATCCAACAAGCCCAGTCTAGAATTGGGAAGACTGCAACTTTTTGCTCCAACATTTTTCAGC
AACTTGATTATGGTCTTGTGCAGTGCCAAGCATGTTACTTCCATTTAATGTTTGTATTCTGTTAATGAATAAGCTAATTTTAGAACTTGGTTATTATATTGAGGA
GCTAAGCAAACACAAGGTGCTATAGAGAAATTTGTCAATTCCAAGTATTTTCCAACTATTCTACTATGTGCTGGGTGCACTATTGTACAGTTAAATTCAAACTCC
GATCATGTTCTTCAGACACCTTTTCAAGATCATGGCACCGTTGAGTGGATTTGCTGGAGTGTACTAAGGTTTTGGAAGAATCTATTGGAGCAATGAAACCATATT
TGCGGCAATTCGTTGATGTATATCCCTTTTTGTAGGTTTAGTAGTAAAATTTTGGTTCAAATGTACTTATTTAAATAGTTTGTTCGTACCAAAACATATATGTTC
ATTGCTTCATTGTACAAACACTTTACCAAAAATTGTACAAATATTAGAAAGTGTATGTTAAAGTATATATATTAAAGCGTTCACCATTTCTT
Protein sequenceShow/hide protein sequence
MLLTQKPSIFVVSSHCRVLPQRRRLPLLHLTSPSLNATSCYYRLGSDTAATVSVQTPRLLSLNTTATILVRTSRLFSLNTATTLCEKFNEAKNAGADLVGGEDLI
EQIKGGFMEFDKLISSPDMMPKTFN