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Cmc11g0302041 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0302041
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationCMiso1.1chr11:22761421..22761888
RNA-Seq ExpressionCmc11g0302041
SyntenyCmc11g0302041
Gene Ontology termsNA
InterPro domainsIPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACX85638.1 putative transposase [Cucumis melo]4.2e-7294.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MVI AHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

KAA0026183.1 putative transposase [Cucumis melo var. makuwa]4.2e-7294.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MVI AHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

TYK09610.1 putative transposase [Cucumis melo var. makuwa]1.4e-7294.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MV+MAHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

TYK24202.1 putative transposase [Cucumis melo var. makuwa]4.2e-7294.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MVI AHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

TYK30776.1 putative transposase [Cucumis melo var. makuwa]4.2e-7294.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MVI AHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

TrEMBL top hitse value%identityAlignment
A0A5A7SNJ1 Putative transposase2.0e-7294.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MVI AHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

A0A5A7U1Q3 Putative transposase2.0e-7294.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MVI AHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

A0A5D3C2L4 Putative transposase2.0e-7294.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MVI AHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

A0A5D3CE46 Putative transposase7.0e-7394.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MV+MAHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

A0A5D3E590 Putative transposase2.0e-7294.48Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        MVI AHFIDDDWNLHKRILNFCQV NHKGDTIGRAIEKCLEGWGIDRLFTVTVDNAS NDVAIAYLVKK KG+NGLVLDGEFIHIRCCAHILNLIVS+AL
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCL M+
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 12.5e-1932.88Show/hide
Query:  IMAHFIDDDWNLHKRILNFCQVDN-HKGDTIGRAIEKCLEGWGI-DRLFTVTVDN-ASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNA
        +   FID +W +H+R+LNF  V + H  + +  AI   L  W + D+LFT+T+DN  S +D+  A L      KN L+L G+   +RC AHILN +  + 
Subjt:  IMAHFIDDDWNLHKRILNFCQVDN-HKGDTIGRAIEKCLEGWGI-DRLFTVTVDN-ASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNA

Query:  LKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        +  +H  I  IR ++K++++SP+  + F + A + ++ +   L ++
Subjt:  LKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

P03010 Putative AC9 transposase1.8e-1736.03Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVD-NHKGDTIGRAIEKCLEGWGID-RLFTVTVDNASLNDVAIAYLVKKSKG-KNGLVLDGEFIHIRCCAHILNLIVS
        M +  H+IDDDW L KRI+ F  V+  H G  + +     +  W I+ +LF +++DNAS N+VA+  +++  +   + LV DG F H+RC  HILNL+  
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVD-NHKGDTIGRAIEKCLEGWGID-RLFTVTVDNASLNDVAIAYLVKKSKG-KNGLVLDGEFIHIRCCAHILNLIVS

Query:  NALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKE
        + L  +  +I +I+  V  V+SSP + +     A E
Subjt:  NALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKE

P08770 Putative AC transposase1.8e-1736.03Show/hide
Query:  MVIMAHFIDDDWNLHKRILNFCQVD-NHKGDTIGRAIEKCLEGWGID-RLFTVTVDNASLNDVAIAYLVKKSKG-KNGLVLDGEFIHIRCCAHILNLIVS
        M +  H+IDDDW L KRI+ F  V+  H G  + +     +  W I+ +LF +++DNAS N+VA+  +++  +   + LV DG F H+RC  HILNL+  
Subjt:  MVIMAHFIDDDWNLHKRILNFCQVD-NHKGDTIGRAIEKCLEGWGID-RLFTVTVDNASLNDVAIAYLVKKSKG-KNGLVLDGEFIHIRCCAHILNLIVS

Query:  NALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKE
        + L  +  +I +I+  V  V+SSP + +     A E
Subjt:  NALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKE

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 23.0e-2033.56Show/hide
Query:  IMAHFIDDDWNLHKRILNFCQVDN-HKGDTIGRAIEKCLEGWGI-DRLFTVTVDN-ASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNA
        +   FID +W +H+R+LNF  V + H  + +  AI   L  W + D+LFT+T+DN  S +D+  A L      KN L+L G+   +RC AHILN +  + 
Subjt:  IMAHFIDDDWNLHKRILNFCQVDN-HKGDTIGRAIEKCLEGWGI-DRLFTVTVDN-ASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNA

Query:  LKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        +  +H  I  IR ++K++++SP+R + F + A + ++ +   L ++
Subjt:  LKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 36.8e-1729.93Show/hide
Query:  IMAHFIDDDWNLHKRILNFCQVDN-HKGDTIGRAIEKCLEGWGI-DRLFTVTVDN-ASLNDVAIAYLVK-KSKGKNGLVLDGEFIHIRCCAHILNLIVSN
        + A FID +W +H+R++NF  V + H  +++  AI   L  W + D+LFT+T+DN  S +D+  A ++   S  K+ +++ G+   +RC AHILN +  +
Subjt:  IMAHFIDDDWNLHKRILNFCQVDN-HKGDTIGRAIEKCLEGWGI-DRLFTVTVDN-ASLNDVAIAYLVK-KSKGKNGLVLDGEFIHIRCCAHILNLIVSN

Query:  ALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
         +  +H  I  IR ++K++++S      F + A + ++ +   L ++
Subjt:  ALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain2.6e-1126.21Show/hide
Query:  IMAHFIDDDWNLHKRILNFCQVDNHKGD-TIGRAIEKCLEGWGID-RLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL
        I AH+ID DW + K++LN       + D  +  A+  C+  WG++ +LF VT ++ + N  A+  +  +   KN  +LDG+ +   C A     +  + L
Subjt:  IMAHFIDDDWNLHKRILNFCQVDNHKGD-TIGRAIEKCLEGWGID-RLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNAL

Query:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME
        +     I  IR++VK+V++S +  + F +  ++ ++ ++  L ++
Subjt:  KDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATAATGGCTCATTTCATTGATGATGATTGGAACTTGCATAAAAGAATTTTGAACTTTTGTCAAGTAGATAATCATAAAGGAGATACAATAGGTAGAGCCATTGA
AAAGTGCTTAGAAGGTTGGGGTATCGATAGGCTCTTTACTGTAACCGTTGATAATGCGAGTTTAAATGATGTAGCCATTGCCTACTTGGTTAAAAAGTCTAAAGGCAAAA
ATGGGTTGGTGTTGGATGGTGAATTTATTCACATTAGATGTTGTGCCCATATTCTTAATTTAATTGTTAGTAATGCCTTAAAAGATTTGCATGTGTCTATCATTCGAATT
AGAAATGCTGTGAAGTATGTTAGGTCATCTCCTGCTAGATTGCAAATATTTAAAGATTTTGCTAAAGAAGATAAGATGTCAACAAAAAATTGTCTTATGATGGAATTCTA
CTTTCACTATGTTGGATGGAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTATAATGGCTCATTTCATTGATGATGATTGGAACTTGCATAAAAGAATTTTGAACTTTTGTCAAGTAGATAATCATAAAGGAGATACAATAGGTAGAGCCATTGA
AAAGTGCTTAGAAGGTTGGGGTATCGATAGGCTCTTTACTGTAACCGTTGATAATGCGAGTTTAAATGATGTAGCCATTGCCTACTTGGTTAAAAAGTCTAAAGGCAAAA
ATGGGTTGGTGTTGGATGGTGAATTTATTCACATTAGATGTTGTGCCCATATTCTTAATTTAATTGTTAGTAATGCCTTAAAAGATTTGCATGTGTCTATCATTCGAATT
AGAAATGCTGTGAAGTATGTTAGGTCATCTCCTGCTAGATTGCAAATATTTAAAGATTTTGCTAAAGAAGATAAGATGTCAACAAAAAATTGTCTTATGATGGAATTCTA
CTTTCACTATGTTGGATGGAGCAATTAA
Protein sequenceShow/hide protein sequence
MVIMAHFIDDDWNLHKRILNFCQVDNHKGDTIGRAIEKCLEGWGIDRLFTVTVDNASLNDVAIAYLVKKSKGKNGLVLDGEFIHIRCCAHILNLIVSNALKDLHVSIIRI
RNAVKYVRSSPARLQIFKDFAKEDKMSTKNCLMMEFYFHYVGWSN