| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-72 | 90.38 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY FDQNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GEAQYVL IQIIRDRKNK LA SQATYIDK+LVRY M NSKK LLPFRHGVHLSK+
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| KAA0033121.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-72 | 90.38 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY F+QNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GEAQYVL IQIIRDRKNK LA SQATYIDKMLVRY M NSKK LLPFRHGVHLSK+
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-72 | 89.74 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY FDQNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GE QYVL IQIIRDRKNK LA SQATYIDK+LVRY M NSKK LLPFRHGVHLSK+
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-72 | 90.38 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY FDQNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GEAQYVL IQIIRDRKNK LA SQATYIDK+LVRY M NSKK LLPFRHGVHLSK+
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 2.5e-72 | 89.74 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY FDQNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GEAQYVL IQIIRDRKNK LA SQATYIDKMLVRYLM NSKK LLPF+HG HLS++
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 1.6e-72 | 89.74 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY FDQNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GE QYVL IQIIRDRKNK LA SQATYIDK+LVRY M NSKK LLPFRHGVHLSK+
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| A0A5A7TZD0 Gag/pol protein | 5.4e-73 | 90.38 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY FDQNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GEAQYVL IQIIRDRKNK LA SQATYIDK+LVRY M NSKK LLPFRHGVHLSK+
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| A0A5A7UYE8 Gag/pol protein | 5.4e-73 | 90.38 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY FDQNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GEAQYVL IQIIRDRKNK LA SQATYIDK+LVRY M NSKK LLPFRHGVHLSK+
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| A0A5D3CYF4 Gag/pol protein | 1.2e-72 | 89.74 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY FDQNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GEAQYVL IQIIRDRKNK LA SQATYIDKMLVRYLM NSKK LLPF+HG HLS++
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| A0A5D3CZY3 Gag/pol protein | 7.0e-73 | 90.38 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQPEGFITQGQEQKVCKLNRSIYGLKQASR WNIRFD AIKSY F+QNVDEPCVYKKINKGK FLVLYVDDILLIGNDVGYLT VK WLAAQFQMKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
GEAQYVL IQIIRDRKNK LA SQATYIDKMLVRY M NSKK LLPFRHGVHLSK+
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.8e-15 | 33.33 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVY--KKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMK
M P+G VCKLN++IYGLKQA+R W F+ A+K F + + C+Y K N + +++LYVDD+++ D+ + K +L +F+M
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVY--KKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMK
Query: DLGEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHN
DL E ++ + I+I + + + SQ+ Y+ K+L ++ M N
Subjt: DLGEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-31 | 43.95 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVY-KKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKD
M QPEGF G++ VCKLN+S+YGLKQA R W ++FD+ +KS ++ + +PCVY K+ ++ L+LYVDD+L++G D G + +K L+ F MKD
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVY-KKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKD
Query: LGEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
LG AQ +L ++I+R+R ++ L SQ YI+++L R+ M N+K P + LSKK
Subjt: LGEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLSKK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.8e-09 | 30 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
+ QP GF+ + V +L +YGLKQA WN +N +K F ++ E +Y + ++ +YVDD+L+ VK L + MKDL
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDK
G+ L + I N + S YI K
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.8e-15 | 35.48 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKA-TFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKD
MSQP GFI + + VCKL +++YGLKQA R W + N + + F +V + ++ + +GK+ ++++YVDDIL+ GND L L+ +F +KD
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKA-TFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKD
Query: LGEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLS
E Y L I+ R L SQ YI +L R M +K P LS
Subjt: LGEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLPFRHGVHLS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.0e-12 | 30.82 | Show/hide |
Query: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
MSQP GF+ + + VC+L ++IYGLKQA R W + + + F ++ + ++ ++++YVDDIL+ GND L L+ +F +K+
Subjt: MSQPEGFITQGQEQKVCKLNRSIYGLKQASRFWNIRFDNAIKSYSFDQNVDEPCVYKKINKGKATFLVLYVDDILLIGNDVGYLTIVKTWLAAQFQMKDL
Query: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLP
+ Y L I+ R + L SQ Y +L R M +K P
Subjt: GEAQYVLDIQIIRDRKNKMLARSQATYIDKMLVRYLMHNSKKSLLP
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