; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc11g0302541 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0302541
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr11:23524357..23525829
RNA-Seq ExpressionCmc11g0302541
SyntenyCmc11g0302541
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025998.1 pol protein [Cucumis melo var. makuwa]1.1e-27295.71Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+RE EVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNRVFKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNW R STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKK LGCVL+QQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

KAA0037369.1 pol protein [Cucumis melo var. makuwa]1.7e-27395.92Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIRE EVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLT AP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNR+FKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIA+PLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSG+FVIYSDASKK LGCVL+QQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

KAA0060745.1 pol protein [Cucumis melo var. makuwa]3.0e-27395.92Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIRE EVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNRVFKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACESSFQELKQKLV APVLTVPDGSG+FVIYSDASKK LGCVL+QQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

KAA0063098.1 pol protein [Cucumis melo var. makuwa]1.1e-27295.51Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MK SKLLSQGTWGILASVVDIRE EVSLSS+PVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMA AELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNRVFKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKELGCVL+QQGKVVAYASRQLK+HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

TYK20443.1 pol protein [Cucumis melo var. makuwa]1.1e-27295.71Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+RE EVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNRVFKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNW R STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKK LGCVL+QQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

TrEMBL top hitse value%identityAlignment
A0A5A7SIJ5 Reverse transcriptase5.5e-27395.71Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+RE EVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNRVFKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNW R STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKK LGCVL+QQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

A0A5A7T7M0 Reverse transcriptase8.4e-27495.92Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIRE EVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLT AP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNR+FKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIA+PLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSG+FVIYSDASKK LGCVL+QQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

A0A5A7V4E4 Reverse transcriptase1.4e-27395.92Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIRE EVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNRVFKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACESSFQELKQKLV APVLTVPDGSG+FVIYSDASKK LGCVL+QQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

A0A5A7V646 Reverse transcriptase5.5e-27395.51Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MK SKLLSQGTWGILASVVDIRE EVSLSS+PVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMA AELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNRVFKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNWPR STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKKELGCVL+QQGKVVAYASRQLK+HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

A0A5D3BTN0 Reverse transcriptase5.5e-27395.71Show/hide
Query:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+RE EVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS IDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAP VFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFM

Query:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL
        DLMNRVFKDFL+SFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+K+TFLGHVVSSEGVSVDPAKIEAVTNW R STVSEIRSFL
Subjt:  DLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELKQKLVTAPVLTVPDGSG+FVIYSDASKK LGCVL+QQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
        HDLELAA+VF LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLEL+KDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP
Subjt:  HDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.5e-8940.39Show/hide
Query:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRI
        Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+P+P +D++  +L     F+TIDL  G+HQ+ +
Subjt:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRI

Query:  RDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLG
            + KTAF +++GHYE++ M FGL NAP  F   MN + +  L    +V++DDI+++S +  EH + L  V E L    L  +  KCEF  ++ TFLG
Subjt:  RDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLG

Query:  HVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIY
        HV++ +G+  +P KIEA+  +P  +   EI++FLGL GYYR+F+ +F+ IA P+T+  +K +     +P  +S+F++LK  +   P+L VPD +  F + 
Subjt:  HVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIY

Query:  SDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPTHDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPG
        +DAS   LG VL Q G  ++Y SR L  HE NY T + EL AIV+  K +RHYL G   +I +DH+ L + +  K+ N +  RW   + ++D +I Y  G
Subjt:  SDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPTHDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPG

Query:  KANVVADALSR
        K N VADALSR
Subjt:  KANVVADALSR

P20825 Retrovirus-related Pol polyprotein from transposon 2976.4e-8538.52Show/hide
Query:  APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRS
        +PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP+P +D++  +L     F+TIDL  
Subjt:  APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRS

Query:  GYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
        G+HQ+ + +  I KTAF ++ GHYE++ M FGL NAP  F   MN + +  L    +V++DDI+I+S +  EH   +  V   L    L  +  KCEF  
Subjt:  GYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL

Query:  KKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIPF-VWSPACESSFQELKQKLVTAPVLTVPDG
        K+  FLGH+V+ +G+  +P K++A+ ++P  +   EIR+FLGL GYYR+F+ +++ IA P+T   +K             +F++LK  ++  P+L +PD 
Subjt:  KKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIPF-VWSPACESSFQELKQKLVTAPVLTVPDG

Query:  SGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPTHDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDC
           FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL AIV+  K +RHYL G +  I +DH+ L++    KE   +  RW   + +Y  
Subjt:  SGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPTHDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDC

Query:  EILYHPGKANVVADALSR
        +I Y  GK N VADALSR
Subjt:  EILYHPGKANVVADALSR

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein5.0e-8237.8Show/hide
Query:  REYPDVFPNELPGLPPPREVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        ++Y ++  N+LP  P P +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T
Subjt:  REYPDVFPNELPGLPPPREVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

Query:  VKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSKTE
        + + +PLPRID+L  ++  A +F+T+DL SGYHQ+ +   D  KTAF +  G YE+ VM FGL NAP  F   M   F+D    FV V++DDILI+S++ 
Subjt:  VKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSKTE

Query:  AEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIP
         EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K  A+ ++P   TV + + FLG+  YYRRF+ + S+IA P+         
Subjt:  AEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIP

Query:  FVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGK------VVAYASRQLKSHEQNYPTHDLELAAIVFDLKIWRHYLYGEK
          W+   + + ++LK  L  +PVL   +   ++ + +DASK  +G VL +         VV Y S+ L+S ++NYP  +LEL  I+  L  +R+ L+G+ 
Subjt:  FVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGK------VVAYASRQLKSHEQNYPTHDLELAAIVFDLKIWRHYLYGEK

Query:  IQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKV
          + TDH SL     + E   R +RWL+ +  YD  + Y  G  NVVADA+SR +
Subjt:  IQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKV

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.4e-8435.91Show/hide
Query:  EYPDVFPNELPGLPPPREVDFAIELEPGT---APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNK
        E+P +F   L G+     V+ A++ E  T    PI    Y        E++ Q+ ELL  G IRPS SP+ +P+  V KK     +   R+ +D++ LN 
Subjt:  EYPDVFPNELPGLPPPREVDFAIELEPGT---APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNK

Query:  VTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSK
        VT+ + YP+P I+     L  A  F+T+DL SG+HQ+ +++SDIPKTAF +  G YEF+ + FGL NAP +F  +++ + ++ +     V+IDDI+++S+
Subjt:  VTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSK

Query:  TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTR--
            H ++L  VL +L    L     K  F   ++ FLG++V+++G+  DP K+ A++  P  ++V E++ FLG+  YYR+F++D++++A PLT LTR  
Subjt:  TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTR--

Query:  ---------KGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQ----QGKVVAYASRQLKSHEQNYPTHDLELAAIVFDL
                   +P         SF +LK  L ++ +L  P  +  F + +DAS   +G VL Q    + + +AY SR L   E+NY T + E+ AI++ L
Subjt:  ---------KGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQ----QGKVVAYASRQLKSHEQNYPTHDLELAAIVFDL

Query:  KIWRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSR
           R YLYG   I++YTDH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVADALSR
Subjt:  KIWRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSR

Q99315 Transposon Ty3-G Gag-Pol polyprotein5.0e-8238.02Show/hide
Query:  REYPDVFPNELPGLPPPREVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        ++Y ++  N+LP  P P +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T
Subjt:  REYPDVFPNELPGLPPPREVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

Query:  VKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSKTE
        + + +PLPRID+L  ++  A +F+T+DL SGYHQ+ +   D  KTAF +  G YE+ VM FGL NAP  F   M   F+D    FV V++DDILI+S++ 
Subjt:  VKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFIDDILIYSKTE

Query:  AEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIP
         EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K  A+ ++P   TV + + FLG+  YYRRF+ + S+IA P+         
Subjt:  AEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIP

Query:  FVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGK------VVAYASRQLKSHEQNYPTHDLELAAIVFDLKIWRHYLYGEK
          W+   + +  +LK  L  +PVL   +   ++ + +DASK  +G VL +         VV Y S+ L+S ++NYP  +LEL  I+  L  +R+ L+G+ 
Subjt:  FVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGK------VVAYASRQLKSHEQNYPTHDLELAAIVFDLKIWRHYLYGEK

Query:  IQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKV
          + TDH SL     + E   R +RWL+ +  YD  + Y  G  NVVADA+SR V
Subjt:  IQIYTDHKSLKYFFTQKELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKV

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.2e-2542.75Show/hide
Query:  HLHQVLETLRANKLYAKFSKCEFWLKKLTFLG--HVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP     +E+R FLGL GYYRRFV+++ +I  PLT+L +K     W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLKKLTFLG--HVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIPFVW

Query:  SPACESSFQELKQKLVTAPVLTVPDGSGSFV
        +     +F+ LK  + T PVL +PD    FV
Subjt:  SPACESSFQELKQKLVTAPVLTVPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATATTAGAGAGCTAGAAGTTTCCTTATCTTCCGAACCAGTGGTAAGGGAGTA
CCCTGATGTCTTTCCCAACGAGCTCCCAGGACTTCCGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAACCGGGCACTGCTCCTATCTCGAGGGCACCTTACAGAA
TGGCTCCGGCCGAGCTAAAGGAGCTGAAAGTCCAGTTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGCGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAG
AAGAAAGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCA
GGGAGCCACTGTCTTTTCCACGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATCAGGGACAGTGACATTCCCAAGACGGCCTTTCGATCCAGGTACGGACATTACG
AGTTCATTGTGATGTCTTTTGGCTTGACTAATGCCCCTGGAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTCCTAGAGTCGTTCGTCATAGTCTTCATTGAT
GACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATT
CTGGTTAAAGAAGCTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTGACCAACTGGCCTCGATCGTCCACAGTTA
GTGAGATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAATCCCTTTT
GTCTGGAGCCCAGCATGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAGCTGGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAGCTTTGTGATTTATAGTGA
TGCCTCCAAGAAGGAACTGGGCTGTGTTCTGGTGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGACTTAG
AGCTGGCAGCTATAGTCTTTGATCTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACTGACCACAAGAGCTTGAAGTACTTCTTCACCCAGAAG
GAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGATGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAA
GGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATATTAGAGAGCTAGAAGTTTCCTTATCTTCCGAACCAGTGGTAAGGGAGTA
CCCTGATGTCTTTCCCAACGAGCTCCCAGGACTTCCGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAACCGGGCACTGCTCCTATCTCGAGGGCACCTTACAGAA
TGGCTCCGGCCGAGCTAAAGGAGCTGAAAGTCCAGTTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGCGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAG
AAGAAAGATGGGTCGATGCGCCTTTGCATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCA
GGGAGCCACTGTCTTTTCCACGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATCAGGGACAGTGACATTCCCAAGACGGCCTTTCGATCCAGGTACGGACATTACG
AGTTCATTGTGATGTCTTTTGGCTTGACTAATGCCCCTGGAGTGTTCATGGATTTGATGAACAGGGTGTTTAAGGACTTCCTAGAGTCGTTCGTCATAGTCTTCATTGAT
GACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATT
CTGGTTAAAGAAGCTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGCGGTGACCAACTGGCCTCGATCGTCCACAGTTA
GTGAGATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAATCCCTTTT
GTCTGGAGCCCAGCATGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAGCTGGTGACTGCACCAGTCCTGACAGTGCCCGATGGGTCGGGAAGCTTTGTGATTTATAGTGA
TGCCTCCAAGAAGGAACTGGGCTGTGTTCTGGTGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGACTTAG
AGCTGGCAGCTATAGTCTTTGATCTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTACACTGACCACAAGAGCTTGAAGTACTTCTTCACCCAGAAG
GAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGATGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAA
GGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTAA
Protein sequenceShow/hide protein sequence
MKASKLLSQGTWGILASVVDIRELEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK
KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSTIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPGVFMDLMNRVFKDFLESFVIVFID
DILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKLTFLGHVVSSEGVSVDPAKIEAVTNWPRSSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGIPF
VWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKELGCVLVQQGKVVAYASRQLKSHEQNYPTHDLELAAIVFDLKIWRHYLYGEKIQIYTDHKSLKYFFTQK
ELNMRQRRWLELMKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTP