CuGenDBv2

Gene ID	Cmc11g0302811
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr11:23920536..23922929
RNA-Seq Expression	Cmc11g0302811
Synteny	Cmc11g0302811
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.94

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKII AQLDD YL EKRR+VET QG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKR+ ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

KAA0060745.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

89.57

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLV APVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQLSVQPTLRQKII AQL+D YL EKRRMVETGQG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKRE ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFSTTFHPQTDGQ ERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

TYK01576.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.94

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKII AQLDD YL EKRR+VET QG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKR+ ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

TYK06888.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.94

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKII AQLDD YL EKRR+VET QG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKR+ ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

88.94

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKII AQLDD YL EKRR+VET QG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKR+ ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

88.94

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKII AQLDD YL EKRR+VET QG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKR+ ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

A0A5A7V2A0 Reverse transcriptase

0.0e+00

88.94

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKII AQLDD YL EKRR+VET QG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKR+ ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

A0A5A7V4E4 Reverse transcriptase

0.0e+00

89.57

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLV APVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQLSVQPTLRQKII AQL+D YL EKRRMVETGQG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKRE ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSIISDRD RFTSKFWKGLQLALGTRLDFSTTFHPQTDGQ ERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

A0A5D3BTN0 Reverse transcriptase

0.0e+00

88.94

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKII AQLDD YL EKRR+VET QG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKR+ ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

A0A5D3C6W3 Reverse transcriptase

0.0e+00

88.94

Show/hide

Query:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFP+ELPGLPPPREVDFAIELE  TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM
        PWGA VLFVKKKDGSMRLCIDYRELNKVTV+NRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT FRSRYGHY+FVVMSFGLTNAPAVFM
Subjt:  PWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFM

Query:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
        +LM RVF+DFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Subjt:  NLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT
        GLAGYYRRFVEDFSRIASPLT                  FQELKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASPLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAAL+TKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEI

Query:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV
        AVSVGEVTAQLAQL+VQPTLRQKII AQLDD YL EKRR+VET QG          L+  GR                +    FTMHPGSTKMYQDLRSV
Subjt:  AVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGT---------LVCAGR--------------QRSQDKCFTMHPGSTKMYQDLRSV

Query:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
        YWWR MKR+ ADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKW SVSMDFITGLPKTLKGY VIWVVVDRLTKSAHFVPGKSTYT SKWGQLYMTEIVR
Subjt:  YWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR

Query:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC
        LHGVPVSI+SDRD RFTSKFWKGLQ+ALGTRLDFST FHPQTDGQTERLN ILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI MAPF+ALYGKCC
Subjt:  LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCC

Query:  RSPVC
        RSPVC
Subjt:  RSPVC

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.1e-110

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Query:  IREPEVSLSSEPVVREYPDV-FPNELPGLPPP-REVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRL
        ++EPE+      + +E+ D+        LP P + ++F +EL ++   +    Y + P +++ +  ++ + L  G IR S +     V+FV KK+G++R+
Subjt:  IREPEVSLSSEPVVREYPDV-FPNELPGLPPP-REVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRL

Query:  CIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFMNLMKRVFQDFLDSFVIVF
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K  FR   G ++++VM +G++ APA F   +  +  +  +S V+ +
Subjt:  CIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFMNLMKRVFQDFLDSFVIVF

Query:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS
        +DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS

Query:  PLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVFALK
        PL +                  + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  PLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDPKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEIAVSVGEVTA
         WRHYL    E  +I TD ++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +V +  P+ +D E   I         
Subjt:  IWRHYLYG--EKIQIYTDPKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEIAVSVGEVTA

Query:  QLAQLSVQPTLRQKIIVAQLDDLYLV-----EKRRMVETGQ---GTLVCAGRQ---------------RSQDKCFTMHPGSTKMYQDLRSVYWWRNMKRE
         + Q+S+    + +++    +D  L+     E +R+ E  Q   G L+ +  Q               +  ++   +HPG   +   +   + W+ ++++
Subjt:  QLAQLSVQPTLRQKIIVAQLDDLYLV-----EKRRMVETGQ---GTLVCAGRQ---------------RSQDKCFTMHPGSTKMYQDLRSVYWWRNMKRE

Query:  EADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVRLHGVPVSII
          ++V  C  CQ  K+   +P G LQP+      W S+SMDFIT LP++  GY  ++VVVDR +K A  VP   + T  +  +++   ++   G P  II
Subjt:  EADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVRLHGVPVSII

Query:  SDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALY
        +D D  FTS+ WK         + FS  + PQTDGQTER N  +E +LR        +W  H+ L++ +YNN+  +   M PF+ ++
Subjt:  SDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALY

P0CT35 Transposon Tf2-2 polyprotein

1.1e-110

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Query:  IREPEVSLSSEPVVREYPDV-FPNELPGLPPP-REVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRL
        ++EPE+      + +E+ D+        LP P + ++F +EL ++   +    Y + P +++ +  ++ + L  G IR S +     V+FV KK+G++R+
Subjt:  IREPEVSLSSEPVVREYPDV-FPNELPGLPPP-REVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRL

Query:  CIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFMNLMKRVFQDFLDSFVIVF
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K  FR   G ++++VM +G++ APA F   +  +  +  +S V+ +
Subjt:  CIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFMNLMKRVFQDFLDSFVIVF

Query:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS
        +DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS

Query:  PLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVFALK
        PL +                  + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  PLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDPKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEIAVSVGEVTA
         WRHYL    E  +I TD ++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +V +  P+ +D E   I         
Subjt:  IWRHYLYG--EKIQIYTDPKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEIAVSVGEVTA

Query:  QLAQLSVQPTLRQKIIVAQLDDLYLV-----EKRRMVETGQ---GTLVCAGRQ---------------RSQDKCFTMHPGSTKMYQDLRSVYWWRNMKRE
         + Q+S+    + +++    +D  L+     E +R+ E  Q   G L+ +  Q               +  ++   +HPG   +   +   + W+ ++++
Subjt:  QLAQLSVQPTLRQKIIVAQLDDLYLV-----EKRRMVETGQ---GTLVCAGRQ---------------RSQDKCFTMHPGSTKMYQDLRSVYWWRNMKRE

Query:  EADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVRLHGVPVSII
          ++V  C  CQ  K+   +P G LQP+      W S+SMDFIT LP++  GY  ++VVVDR +K A  VP   + T  +  +++   ++   G P  II
Subjt:  EADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVRLHGVPVSII

Query:  SDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALY
        +D D  FTS+ WK         + FS  + PQTDGQTER N  +E +LR        +W  H+ L++ +YNN+  +   M PF+ ++
Subjt:  SDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALY

P0CT41 Transposon Tf2-12 polyprotein

1.1e-110

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Query:  IREPEVSLSSEPVVREYPDV-FPNELPGLPPP-REVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRL
        ++EPE+      + +E+ D+        LP P + ++F +EL ++   +    Y + P +++ +  ++ + L  G IR S +     V+FV KK+G++R+
Subjt:  IREPEVSLSSEPVVREYPDV-FPNELPGLPPP-REVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRL

Query:  CIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFMNLMKRVFQDFLDSFVIVF
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K  FR   G ++++VM +G++ APA F   +  +  +  +S V+ +
Subjt:  CIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFMNLMKRVFQDFLDSFVIVF

Query:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS
        +DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS

Query:  PLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVFALK
        PL +                  + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  PLTH-----------------FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDPKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEIAVSVGEVTA
         WRHYL    E  +I TD ++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +V +  P+ +D E   I         
Subjt:  IWRHYLYG--EKIQIYTDPKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEIAVSVGEVTA

Query:  QLAQLSVQPTLRQKIIVAQLDDLYLV-----EKRRMVETGQ---GTLVCAGRQ---------------RSQDKCFTMHPGSTKMYQDLRSVYWWRNMKRE
         + Q+S+    + +++    +D  L+     E +R+ E  Q   G L+ +  Q               +  ++   +HPG   +   +   + W+ ++++
Subjt:  QLAQLSVQPTLRQKIIVAQLDDLYLV-----EKRRMVETGQ---GTLVCAGRQ---------------RSQDKCFTMHPGSTKMYQDLRSVYWWRNMKRE

Query:  EADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVRLHGVPVSII
          ++V  C  CQ  K+   +P G LQP+      W S+SMDFIT LP++  GY  ++VVVDR +K A  VP   + T  +  +++   ++   G P  II
Subjt:  EADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVRLHGVPVSII

Query:  SDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALY
        +D D  FTS+ WK         + FS  + PQTDGQTER N  +E +LR        +W  H+ L++ +YNN+  +   M PF+ ++
Subjt:  SDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

2.0e-117

32.76

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Query:  KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPNELPGLPPPREV-DFAIELERDTAPISR----APYRMAPAELKELKVQLQ
        +AS L   G +  + S +   EP  +  S           + ++Y ++  N+LP  P P ++ +  ++ + +  P +R     PY +     +E+   +Q
Subjt:  KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPNELPGLPPPREV-DFAIELERDTAPISR----APYRMAPAELKELKVQLQ

Query:  ELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVV
        +LLD  FI PS SP  + V+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KT F +  G Y++ V
Subjt:  ELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVV

Query:  MSFGLTNAPAVFMNLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M FGL NAP+ F   M   F+D    FV V++DDILI+S++  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Subjt:  MSFGLTNAPAVFMNLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTHF---------------QELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------V
        P P TV + + FLG+  YYRRF+ + S+IA P+  F               ++LK  L  +PVL   +   ++ + +DASK G+G VL +         V
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTHF---------------QELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------V

Query:  VAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAA
        V Y S+ L++ ++NYP  +LEL  ++ AL  +R+ L+G+   + TD  SL     + E   R +RWL+ +  YD  + Y  G  NVVADA+SR +     
Subjt:  VAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAA

Query:  LVTK--QTPLLRDFERAEIAVSVGEV-TAQLAQLSVQP-------TLRQKIIVAQL--------DDLYLVEKRRMVETGQGTLVCAGRQRSQDKCFTMHP
          ++   T   + + +++   S   +   +L Q +V P       + ++K+ +++         D++   + R +V   Q   V   R       F  H 
Subjt:  LVTK--QTPLLRDFERAEIAVSVGEV-TAQLAQLSVQP-------TLRQKIIVAQL--------DDLYLVEKRRMVETGQGTLVCAGRQRSQDKCFTMHP

Query:  GSTKMYQDLRSVYWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVS
        G T     +  +Y+W  ++     ++  C+ CQ +K+ R R  GLLQPL +   +W  +SMDF+TGLP T     +I VVVDR +K AHF+  + T   +
Subjt:  GSTKMYQDLRSVYWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVS

Query:  KWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATID
        +   L    I   HG P +I SDRD R T+  ++ L   LG +   S+  HPQTDGQ+ER    L  +LRA V     +W  +L  +EF YN++   T+ 
Subjt:  KWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATID

Query:  MAPFKALYGKCCRSP
         +PF+   G    +P
Subjt:  MAPFKALYGKCCRSP

Q99315 Transposon Ty3-G Gag-Pol polyprotein

5.8e-117

32.76

Show/hide

Query:  KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPNELPGLPPPREV-DFAIELERDTAPISR----APYRMAPAELKELKVQLQ
        +AS L   G +  + S +   EP  +  S           + ++Y ++  N+LP  P P ++ +  ++ + +  P +R     PY +     +E+   +Q
Subjt:  KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPNELPGLPPPREV-DFAIELERDTAPISR----APYRMAPAELKELKVQLQ

Query:  ELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVV
        +LLD  FI PS SP  + V+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KT F +  G Y++ V
Subjt:  ELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVV

Query:  MSFGLTNAPAVFMNLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M FGL NAP+ F   M   F+D    FV V++DDILI+S++  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Subjt:  MSFGLTNAPAVFMNLMKRVFQDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTHF---------------QELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------V
        P P TV + + FLG+  YYRRF+ + S+IA P+  F                +LK  L  +PVL   +   ++ + +DASK G+G VL +         V
Subjt:  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTHF---------------QELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------V

Query:  VAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAA
        V Y S+ L++ ++NYP  +LEL  ++ AL  +R+ L+G+   + TD  SL     + E   R +RWL+ +  YD  + Y  G  NVVADA+SR V     
Subjt:  VAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAA

Query:  LVTK--QTPLLRDFERAEIAVSVGEV-TAQLAQLSVQP-------TLRQKIIVAQL--------DDLYLVEKRRMVETGQGTLVCAGRQRSQDKCFTMHP
          ++   T   + + +++   S   +   +L Q +V P       + ++K+ +++         D++   + R +V   Q   V   R       F  H 
Subjt:  LVTK--QTPLLRDFERAEIAVSVGEV-TAQLAQLSVQP-------TLRQKIIVAQL--------DDLYLVEKRRMVETGQGTLVCAGRQRSQDKCFTMHP

Query:  GSTKMYQDLRSVYWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVS
        G T     +  +Y+W  ++     ++  C+ CQ +K+ R R  GLLQPL +   +W  +SMDF+TGLP T     +I VVVDR +K AHF+  + T   +
Subjt:  GSTKMYQDLRSVYWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVS

Query:  KWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATID
        +   L    I   HG P +I SDRD R T+  ++ L   LG +   S+  HPQTDGQ+ER    L  +LRA       +W  +L  +EF YN++   T+ 
Subjt:  KWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATID

Query:  MAPFKALYGKCCRSP
         +PF+   G    +P
Subjt:  MAPFKALYGKCCRSP

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.9e-22

41.54

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Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTH----------
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P   +E+R FLGL GYYRRFV+++ +I  PLT           
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTH----------

Query:  ------FQELKQKLVTAPVLTVPDGSGSFV
              F+ LK  + T PVL +PD    FV
Subjt:  ------FQELKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATATTAGAGAGCCAGAAGTTTCCCTATCTTCTGAACCAGTGGTAAGGGAGTA
CCCTGATGTTTTCCCCAACGAACTCCCAGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATCGAGTTAGAGCGGGACACTGCCCCTATCTCGAGGGCCCCTTACAGAA
TGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCTAGTGTTGTTTGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAGAAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCA
GGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGTCAGGCTATCACCAGTTGAGGATTAGGGACAGTGACATTCCCAAGACGACCTTTCGTTCGAGGTACGGACATTACA
AGTTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGAATTTGATGAAAAGGGTATTTCAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGAT
GACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATT
CTGGTTAAGGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACAGTTA
GTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCACTTTCAGGAGCTCAAGCAGAAGCTG
GTGACTGCACCAGTTCTGACAGTGCCCGATGGGTCGGGAAGCTTTGTGATCTATAGTGATGCCTCCAAGAAGGGATTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGT
TGCTTATGCCTCCCGCCAGTTGAAGAATCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACG
GTGAGAAGATACAGATTTACACTGACCCTAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGAC
TGCGAGATCCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCACTGAGTAGGAAGGTTGCACATTCAGCAGCGCTGGTCACCAAGCAAACTCCCTTACTCAGAGA
TTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGGGAGGTTACCGCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATCATCGTTGCCCAGCTGGATG
ATCTTTACTTGGTCGAGAAGCGTCGTATGGTAGAGACAGGGCAAGGGACGCTTGTGTGTGCTGGAAGACAACGTAGTCAAGACAAGTGCTTTACCATGCACCCTGGGAGC
ACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGAAACATGAAGAGGGAAGAGGCAGACTTTGTCAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAG
ACAGCGTCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGGGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTATAAAG
TGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCTACTTACACTGTCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGA
CTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACGAGGTTAGACTTCAGCACGAC
ATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCTGATTTTGGAAGACATGCTGCGGGCTTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCTCATCTGCATC
TGATGGAGTTTGCCTATAATAACAGCTACCAAGCTACTATCGATATGGCACCGTTTAAGGCTCTGTATGGCAAGTGCTGTAGATCTCCTGTCTGCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVK
KKDGSMRLCIDYRELNKVTVRNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTTFRSRYGHYKFVVMSFGLTNAPAVFMNLMKRVFQDFLDSFVIVFID
DILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTHFQELKQKL
VTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMRQRRWLELVKDYD
CEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIVAQLDDLYLVEKRRMVETGQGTLVCAGRQRSQDKCFTMHPGS
TKMYQDLRSVYWWRNMKREEADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWGSVSMDFITGLPKTLKGYKVIWVVVDRLTKSAHFVPGKSTYTVSKWGQLYMTEIVR
LHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNLILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIDMAPFKALYGKCCRSPVC

Cmc11g0302811 (gene) of Melon (Charmono) v1.1 genome