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Cmc11g0303661 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0303661
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr11:25179174..25179506
RNA-Seq ExpressionCmc11g0303661
SyntenyCmc11g0303661
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-4790.91Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNG AVVW SIKQG IADSTMEAEYVAA EAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSG V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-4790.91Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNG AVVW SIKQG IADSTMEAEYVAA EAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSG V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
KAA0058369.1 gag/pol protein [Cucumis melo var. makuwa]8.7e-4890Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNGRAVVW SIKQG IADSTMEAEYVAA EAAKEAVWLRK+LHDLEVVPNMNLPITLYCDN+G V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-4790.91Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNG AVVW SIKQG IADSTMEAEYVAA EAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSG V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
TYK16417.1 gag/pol protein [Cucumis melo var. makuwa]2.5e-4788.18Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNG AVVWCSIKQG IADSTMEAEY+A  EAAKE VWLRKFLHDLEVVPNMNLPITLYCDN G V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
TrEMBL top hitse value%identityAlignment
A0A5A7TKM4 Gag/pol protein5.5e-4890.91Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNG AVVW SIKQG IADSTMEAEYVAA EAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSG V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
A0A5A7TZD0 Gag/pol protein5.5e-4890.91Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNG AVVW SIKQG IADSTMEAEYVAA EAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSG V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
A0A5A7UXX3 Gag/pol protein4.2e-4890Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNGRAVVW SIKQG IADSTMEAEYVAA EAAKEAVWLRK+LHDLEVVPNMNLPITLYCDN+G V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
A0A5A7UYE8 Gag/pol protein5.5e-4890.91Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNG AVVW SIKQG IADSTMEAEYVAA EAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSG V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
A0A5D3CWZ1 Gag/pol protein1.2e-4788.18Show/hide
Query:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        MLVYGAKDLILTGYTDSDFQ DK+S+KST GSVF LNG AVVWCSIKQG IADSTMEAEY+A  EAAKE VWLRKFLHDLEVVPNMNLPITLYCDN G V
Subjt:  MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Query:  ANSKEPRSHK
        ANSKEPRSHK
Subjt:  ANSKEPRSHK
SwissProt top hitse value%identityAlignment
P04146 Copia protein5.2e-1134.65Show/hide
Query:  LTGYTDSDFQIDKNSKKSTLGSVF-ILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKVANSKEPRSH
        + GY DSD+   +  +KST G +F + +   + W + +Q  +A S+ EAEY+A +EA +EA+WL+  L  + +   +  PI +Y DN G ++ +  P  H
Subjt:  LTGYTDSDFQIDKNSKKSTLGSVF-ILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKVANSKEPRSH

Query:  K
        K
Subjt:  K
P0CV72 Secreted RxLR effector protein 1618.3e-0950.79Show/hide
Query:  LTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWL
        L GY+D+D+  D  S++ST G +F LNG  V W S KQ  +A S+ E EY+A  EA +EAVWL
Subjt:  LTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWL
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.9e-1539.81Show/hide
Query:  LVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKVA
        L +G  D IL GYTD+D   D +++KS+ G +F  +G A+ W S  Q  +A ST EAEY+AA E  KE +WL++FL +L +         +YCD+   + 
Subjt:  LVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKVA

Query:  NSKEPRSH
         SK    H
Subjt:  NSKEPRSH
Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.8e-0932.26Show/hide
Query:  DLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV
        ++ L  ++D+ FQ  K++++ST G    L    + W S KQ  ++ S+ EAEY A   A  E +WL +F  +L++   ++ P  L+CDN+  +
Subjt:  DLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACTCTGATTTCCAAATCGATAAGAATTCTAAAAAATCTACGTTGGGATCAGTGTTCATC
CTAAATGGAAGAGCTGTAGTATGGTGTAGCATCAAACAAGGTTACATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTATGAAGCAGCAAAAGAAGCA
GTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGAAAGTAGCCAATTCTAAAGAA
CCTCGCAGCCACAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACTCTGATTTCCAAATCGATAAGAATTCTAAAAAATCTACGTTGGGATCAGTGTTCATC
CTAAATGGAAGAGCTGTAGTATGGTGTAGCATCAAACAAGGTTACATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTATGAAGCAGCAAAAGAAGCA
GTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGAAAGTAGCCAATTCTAAAGAA
CCTCGCAGCCACAAATGA
Protein sequenceShow/hide protein sequence
MLVYGAKDLILTGYTDSDFQIDKNSKKSTLGSVFILNGRAVVWCSIKQGYIADSTMEAEYVAAYEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGKVANSKE
PRSHK