; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc11g0303961 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0303961
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr11:25508639..25509325
RNA-Seq ExpressionCmc11g0303961
SyntenyCmc11g0303961
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033501.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.3e-7393.88Show/hide
Query:  SVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDL
        +    +KDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQ MSYVPYSNAIGSLMYLMVCTRPDL
Subjt:  SVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDL

Query:  AHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKL
        AHSSSLVSWYI NPGKIHW ATKWVFRYLVGTENRGLLYKPPKDSKL
Subjt:  AHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKL

KAA0039651.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]5.4e-8485.11Show/hide
Query:  EIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMV
        E+K ++ +     DLGA KKILGIEILRDRNNNELSLTQKTYTNKVLCRFN+ANSKVV TPLAQHIKISARDSPKDPTDRQ MSYVPYSNA GSLMYLMV
Subjt:  EIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMV

Query:  CTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK
        CTRPDLAHSSSLVS Y+GN GKIHW ATKWVFRYLVGTENRGLLYK P DSKL+VRGF+D DFAGDPDKRRSLTG AFTLGENLI+ K
Subjt:  CTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK

KAA0051442.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-9592.27Show/hide
Query:  GRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAI
        GRDL KLKEIKAQLS EFDMKDLGA KKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVV TPLAQHIKISAR SPKDPTDRQ MSYVPYSNA 
Subjt:  GRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAI

Query:  GSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS
        GSLMYLMVCTRPDLAHSSSLVS Y+GNP KIHW ATKWVF YLVGTENRGLLYKPPKDSKL+VRGFVD DFAGDPDKRRSLTGFAFTL ENLIS
Subjt:  GSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS

KAA0054988.1 hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa]3.0e-7472.48Show/hide
Query:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY
        MLLAGRD  KLKEIKAQLS EFDMKDLGA KKILGIEILRDRNNNELSLTQKTYTNK                                           
Subjt:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY

Query:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK
          A GSLMYLMVCTR DLAHSSSLVS Y+GNP KIHW ATKWVFRYLVGTENRGLLYKPPKDSKL+VRGFVDADFAGDP KRRSLTGFAFTLGENLISWK
Subjt:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK

Query:  SNLQSVVALSTSEAEFKV
        SNLQSVVALST+EA+F V
Subjt:  SNLQSVVALSTSEAEFKV

TYK27724.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.3e-9088.38Show/hide
Query:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY
        MLLAGRD  KLKEIKAQLS EFDMKDLGA KKIL +EILRDRN NELSL QKTYTNKVLCRFNMANSKV  TPLAQHIKISARDSPKDPTDRQ MSYV Y
Subjt:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY

Query:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS
        SNA GSLMYLMVCTRPDLAHSSS+V+ Y+GNPGKIHW ATKWVFRYLVGTENRGLLYKPPKD KL+VRGFVDA+FAGDPDK R LTGFAFTLGENLIS
Subjt:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS

TrEMBL top hitse value%identityAlignment
A0A5A7SVP7 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-7393.88Show/hide
Query:  SVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDL
        +    +KDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQ MSYVPYSNAIGSLMYLMVCTRPDL
Subjt:  SVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMVCTRPDL

Query:  AHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKL
        AHSSSLVSWYI NPGKIHW ATKWVFRYLVGTENRGLLYKPPKDSKL
Subjt:  AHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKL

A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-9592.27Show/hide
Query:  GRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAI
        GRDL KLKEIKAQLS EFDMKDLGA KKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVV TPLAQHIKISAR SPKDPTDRQ MSYVPYSNA 
Subjt:  GRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAI

Query:  GSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS
        GSLMYLMVCTRPDLAHSSSLVS Y+GNP KIHW ATKWVF YLVGTENRGLLYKPPKDSKL+VRGFVD DFAGDPDKRRSLTGFAFTL ENLIS
Subjt:  GSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS

A0A5A7UJ23 Integrase catalytic domain-containing protein1.4e-7472.48Show/hide
Query:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY
        MLLAGRD  KLKEIKAQLS EFDMKDLGA KKILGIEILRDRNNNELSLTQKTYTNK                                           
Subjt:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY

Query:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK
          A GSLMYLMVCTR DLAHSSSLVS Y+GNP KIHW ATKWVFRYLVGTENRGLLYKPPKDSKL+VRGFVDADFAGDP KRRSLTGFAFTLGENLISWK
Subjt:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK

Query:  SNLQSVVALSTSEAEFKV
        SNLQSVVALST+EA+F V
Subjt:  SNLQSVVALSTSEAEFKV

A0A5D3BAM8 Retrotransposon protein, putative, Ty1-copia subclass2.6e-8485.11Show/hide
Query:  EIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMV
        E+K ++ +     DLGA KKILGIEILRDRNNNELSLTQKTYTNKVLCRFN+ANSKVV TPLAQHIKISARDSPKDPTDRQ MSYVPYSNA GSLMYLMV
Subjt:  EIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMV

Query:  CTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK
        CTRPDLAHSSSLVS Y+GN GKIHW ATKWVFRYLVGTENRGLLYK P DSKL+VRGF+D DFAGDPDKRRSLTG AFTLGENLI+ K
Subjt:  CTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK

A0A5D3DW48 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-9088.38Show/hide
Query:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY
        MLLAGRD  KLKEIKAQLS EFDMKDLGA KKIL +EILRDRN NELSL QKTYTNKVLCRFNMANSKV  TPLAQHIKISARDSPKDPTDRQ MSYV Y
Subjt:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY

Query:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS
        SNA GSLMYLMVCTRPDLAHSSS+V+ Y+GNPGKIHW ATKWVFRYLVGTENRGLLYKPPKD KL+VRGFVDA+FAGDPDK R LTGFAFTLGENLIS
Subjt:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.1e-2834.39Show/hide
Query:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY
        +++A  D+ ++   K  L  +F M DL   K  +GI I  +   +++ L+Q  Y  K+L +FNM N   V TPL   I     +S +D          P 
Subjt:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY

Query:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGE-NLISW
         + IG LMY+M+CTRPDL  + +++S Y        W   K V RYL GT +  L++K     + ++ G+VD+D+AG    R+S TG+ F + + NLI W
Subjt:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGE-NLISW

Query:  KSNLQSVVALSTSEAEFKVFF
         +  Q+ VA S++EAE+   F
Subjt:  KSNLQSVVALSTSEAEFKVFF

P0CV72 Secreted RxLR effector protein 1611.6e-2245.08Show/hide
Query:  MSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGE
        M  VPY +A+G++MYLMV TRPDLA +  ++S +  +P   HW A K V RYL  T+  GL +     +KL   G+ DAD+AGD + RRS +G+ F L  
Subjt:  MSYVPYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGE

Query:  NLISWKSNLQSVVALSTSEAEF
          +SW+S  Q  VALS++E E+
Subjt:  NLISWKSNLQSVVALSTSEAEF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-5349.54Show/hide
Query:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY
        ML+ G+D   + ++K  LS  FDMKDLG  ++ILG++I+R+R + +L L+Q+ Y  +VL RFNM N+K V TPLA H+K+S +  P    ++  M+ VPY
Subjt:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPY

Query:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK
        S+A+GSLMY MVCTRPD+AH+  +VS ++ NPGK HW A KW+ RYL GT    L +     S   ++G+ DAD AGD D R+S TG+ FT     ISW+
Subjt:  SNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWK

Query:  SNLQSVVALSTSEAEF
        S LQ  VALST+EAE+
Subjt:  SNLQSVVALSTSEAEF

P92519 Uncharacterized mitochondrial protein AtMg008101.6e-2234.86Show/hide
Query:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSP-KDPTDRQTMSYVP
        +LL G     L  +  QLS  F MKDLG     LGI+I    + + L L+Q  Y  ++L    M + K + TPL   +  S   +   DP+D        
Subjt:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSP-KDPTDRQTMSYVP

Query:  YSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISW
        + + +G+L YL + TRPD++++ ++V   +  P    +   K V RY+ GT   GL     K+SKL V+ F D+D+AG    RRS TGF   LG N+ISW
Subjt:  YSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISW

Query:  KSNLQSVVALSTSEAEFK
         +  Q  V+ S++E E++
Subjt:  KSNLQSVVALSTSEAEFK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.8e-2737.44Show/hide
Query:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPK--DPTDRQTMSYV
        +L+ G D + LK     LS  F +K+       LGIE  R      L L+Q+ YT  +L R NM  +K V TP+A   K++     K  DPT+       
Subjt:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPK--DPTDRQTMSYV

Query:  PYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS
         Y   +GSL YL   TRPDL+++ + +S Y+  P   HW A K V RYL GT + G+  K  K + L +  + DAD+AGD D   S  G+   LG + IS
Subjt:  PYSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLIS

Query:  WKSNLQSVVALSTSEAEFK
        W S  Q  V  S++EAE++
Subjt:  WKSNLQSVVALSTSEAEFK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.1e-2233.97Show/hide
Query:  EIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMV
        E+K+QL   F ++DLG  K  LG+EI R      +++ Q+ Y   +L    +   K    P+   +  SA  S  D  D +      Y   IG LMYL +
Subjt:  EIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYLMV

Query:  CTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWKSNLQSVVALSTS
         TR D++ + + +S +   P   H  A   +  Y+ GT  +GL Y    + +LQV  F DA F    D RRS  G+   LG +LISWKS  Q VV+ S++
Subjt:  CTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWKSNLQSVVALSTS

Query:  EAEFKVFFY
        EAE++   +
Subjt:  EAEFKVFFY

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.9e-0839.51Show/hide
Query:  MYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGF
        MYL + TRPDL  + + +S +          A   V  Y+ GT  +GL Y    D  LQ++ F D+D+A  PD RRS+TGF
Subjt:  MYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGF

ATMG00810.1 DNA/RNA polymerases superfamily protein1.1e-2334.86Show/hide
Query:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSP-KDPTDRQTMSYVP
        +LL G     L  +  QLS  F MKDLG     LGI+I    + + L L+Q  Y  ++L    M + K + TPL   +  S   +   DP+D        
Subjt:  MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSP-KDPTDRQTMSYVP

Query:  YSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISW
        + + +G+L YL + TRPD++++ ++V   +  P    +   K V RY+ GT   GL     K+SKL V+ F D+D+AG    RRS TGF   LG N+ISW
Subjt:  YSNAIGSLMYLMVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISW

Query:  KSNLQSVVALSTSEAEFK
         +  Q  V+ S++E E++
Subjt:  KSNLQSVVALSTSEAEFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACTAGCAGGGAGAGATCTAATCAAGTTAAAAGAAATCAAAGCTCAACTCAGTGTTGAATTTGATATGAAGGACCTAGGAGCAACTAAGAAAATCCTAGGAATTGA
AATCTTAAGAGATAGAAATAACAATGAGTTATCTCTAACTCAGAAGACCTACACCAACAAGGTACTTTGTAGATTCAACATGGCTAACTCAAAGGTAGTTTTTACACCTT
TAGCACAACACATTAAAATATCAGCAAGAGATTCACCTAAAGATCCAACTGACAGACAAACAATGAGCTATGTACCGTACTCTAATGCTATAGGCAGCCTAATGTATCTA
ATGGTCTGTACTAGGCCAGATCTAGCTCACAGTTCAAGTCTTGTCAGCTGGTATATAGGAAACCCAGGCAAGATTCATTGGGGGGCAACTAAATGGGTTTTCAGGTACCT
AGTTGGAACTGAAAATAGGGGGTTGCTTTATAAACCTCCTAAAGATTCTAAACTACAAGTAAGAGGCTTTGTGGATGCTGATTTTGCTGGAGATCCTGATAAAAGAAGAT
CACTAACTGGCTTTGCCTTCACTTTGGGAGAAAATCTTATCAGTTGGAAATCAAATTTACAATCAGTAGTTGCCCTGTCAACTAGTGAAGCAGAATTCAAAGTTTTCTTT
TACATTTTAGTTTTTGAACTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTACTAGCAGGGAGAGATCTAATCAAGTTAAAAGAAATCAAAGCTCAACTCAGTGTTGAATTTGATATGAAGGACCTAGGAGCAACTAAGAAAATCCTAGGAATTGA
AATCTTAAGAGATAGAAATAACAATGAGTTATCTCTAACTCAGAAGACCTACACCAACAAGGTACTTTGTAGATTCAACATGGCTAACTCAAAGGTAGTTTTTACACCTT
TAGCACAACACATTAAAATATCAGCAAGAGATTCACCTAAAGATCCAACTGACAGACAAACAATGAGCTATGTACCGTACTCTAATGCTATAGGCAGCCTAATGTATCTA
ATGGTCTGTACTAGGCCAGATCTAGCTCACAGTTCAAGTCTTGTCAGCTGGTATATAGGAAACCCAGGCAAGATTCATTGGGGGGCAACTAAATGGGTTTTCAGGTACCT
AGTTGGAACTGAAAATAGGGGGTTGCTTTATAAACCTCCTAAAGATTCTAAACTACAAGTAAGAGGCTTTGTGGATGCTGATTTTGCTGGAGATCCTGATAAAAGAAGAT
CACTAACTGGCTTTGCCTTCACTTTGGGAGAAAATCTTATCAGTTGGAAATCAAATTTACAATCAGTAGTTGCCCTGTCAACTAGTGAAGCAGAATTCAAAGTTTTCTTT
TACATTTTAGTTTTTGAACTTTTATAA
Protein sequenceShow/hide protein sequence
MLLAGRDLIKLKEIKAQLSVEFDMKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQTMSYVPYSNAIGSLMYL
MVCTRPDLAHSSSLVSWYIGNPGKIHWGATKWVFRYLVGTENRGLLYKPPKDSKLQVRGFVDADFAGDPDKRRSLTGFAFTLGENLISWKSNLQSVVALSTSEAEFKVFF
YILVFELL