CuGenDBv2

Gene ID	Cmc11g0304411
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr11:25914368..25916569
RNA-Seq Expression	Cmc11g0304411
Synteny	Cmc11g0304411
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.6

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYA+FSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR  VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ ND YLVEKR LAE  QAVEFSLSSD GLLFER LCVPSD   KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHS PFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARF SKFW GLQ  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EFAYNNSYQATIGM PFEALYGKCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

KAA0040695.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.88

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTL DNKLYA+FSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYR  VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSND YLVEKRGLAE  QA EFSLSSD GLLFER LCVPSD  VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHS PFSMHPGSTKMYQDLKRVYWW NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        K AHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARF SKFW GLQ  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EFAYNNSYQATIGMAPFEALYGKCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

96.29

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYA+FSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR  VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSND YLVEKRGLAE  QAVEFSLSSD GLLFERRLCVPSD VVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHS PFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF SKFW  LQ  MGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EF YNNSYQATIGMAPFEALYGKCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.6

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSGY+QLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYA+FSKCEFWLK VSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR  VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSND YLVEKRGLAE  QAVEFSLSSD GL FE RLCVPSD  VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHS PFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF SKFW GLQ  MGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EFAYNNSYQATIGMAPFEALYGKCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.6

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYA+FSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR  VENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSND YLVEKRGLAE  QAVEFSLSSD GLLFERRLCVPSD  VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHS PFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARF SKFW GLQ  MGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EFAYNNSYQATIGMAPFEALY KCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

95.6

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYA+FSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR  VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ ND YLVEKR LAE  QAVEFSLSSD GLLFER LCVPSD   KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHS PFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DARF SKFW GLQ  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EFAYNNSYQATIGM PFEALYGKCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

A0A5A7TGX4 Reverse transcriptase

0.0e+00

95.88

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTL DNKLYA+FSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYR  VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSND YLVEKRGLAE  QA EFSLSSD GLLFER LCVPSD  VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHS PFSMHPGSTKMYQDLKRVYWW NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        K AHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARF SKFW GLQ  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EFAYNNSYQATIGMAPFEALYGKCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

A0A5A7U330 Reverse transcriptase

0.0e+00

96.29

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYA+FSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR  VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSND YLVEKRGLAE  QAVEFSLSSD GLLFERRLCVPSD VVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHS PFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF SKFW  LQ  MGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EF YNNSYQATIGMAPFEALYGKCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

A0A5A7UAA8 Reverse transcriptase

0.0e+00

95.6

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSGY+QLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYA+FSKCEFWLK VSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR  VENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSND YLVEKRGLAE  QAVEFSLSSD GL FE RLCVPSD  VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHS PFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARF SKFW GLQ  MGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EFAYNNSYQATIGMAPFEALYGKCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

A0A5A7UP94 Pol protein

0.0e+00

95.6

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR+C DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
        TAFRSRYGHYEFIVM FGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYA+FSKCEFWLK VSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR  VENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV DA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSND YLVEKRGLAE  QAVEFSLSSD GLLFERRLCVPSD  VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKT

Query:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHS PFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARF SKFW GLQ  MGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LIEFAYNNSYQATIGMAPFEALYGKCCR
        L+EFAYNNSYQATIGMAPFEALY KCCR
Subjt:  LIEFAYNNSYQATIGMAPFEALYGKCCR

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.1e-128

33.65

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+  DY+ LNK    N YPLP I+ L  ++QG+T+F+++DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
         AFR   G +E++VMP+G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF    V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R  +   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--
        G AN + DALSR       ++    P+ +D E   I          + Q+++    + +++   +ND+ L+    L    + VE ++   DGLL   +  
Subjt:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--

Query:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  F S+ W    +     + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY

P0CT35 Transposon Tf2-2 polyprotein

3.1e-128

33.65

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+  DY+ LNK    N YPLP I+ L  ++QG+T+F+++DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
         AFR   G +E++VMP+G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF    V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R  +   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--
        G AN + DALSR       ++    P+ +D E   I          + Q+++    + +++   +ND+ L+    L    + VE ++   DGLL   +  
Subjt:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--

Query:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  F S+ W    +     + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY

P0CT36 Transposon Tf2-3 polyprotein

3.1e-128

33.65

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+  DY+ LNK    N YPLP I+ L  ++QG+T+F+++DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
         AFR   G +E++VMP+G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF    V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R  +   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--
        G AN + DALSR       ++    P+ +D E   I          + Q+++    + +++   +ND+ L+    L    + VE ++   DGLL   +  
Subjt:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--

Query:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  F S+ W    +     + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY

P0CT37 Transposon Tf2-4 polyprotein

3.1e-128

33.65

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+  DY+ LNK    N YPLP I+ L  ++QG+T+F+++DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
         AFR   G +E++VMP+G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF    V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R  +   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--
        G AN + DALSR       ++    P+ +D E   I          + Q+++    + +++   +ND+ L+    L    + VE ++   DGLL   +  
Subjt:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--

Query:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  F S+ W    +     + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY

P0CT41 Transposon Tf2-12 polyprotein

3.1e-128

33.65

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+  DY+ LNK    N YPLP I+ L  ++QG+T+F+++DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG
         AFR   G +E++VMP+G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF    V F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R  +   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--
        G AN + DALSR       ++    P+ +D E   I          + Q+++    + +++   +ND+ L+    L    + VE ++   DGLL   +  
Subjt:  GKANVVVDALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERR--

Query:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  F S+ W    +     + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY
          P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  EFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.9e-25

42.75

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Query:  HLRIVLQTLRDNKLYARFSKCEFWLKHVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F    +++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYR  V+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRDNKLYARFSKCEFWLKHVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAGCTGAAAGAATTAAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCCCCTTGGGGTGCGCCAGTTTTATTT
GTTAAGAAGAAGGATGGATCGATGCGTGTATGCACTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTT
GACCAGTTACAGGGAGCCACAGTGTTCTCTGAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAAACAGCATTTCGTTCC
AGATATGGACACTACGAGTTTATTGTGATGCCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACT
TTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTG
TATGCAAGGTTCTCGAAATGCGAGTTTTGGCTGAAGCACGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCA
GTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGATGGTTAGTGGAGAACTTTTCTCGTATAGCTACT
CCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTT
ACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCT
CGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAG
ATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGT
GAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGTTGATGCTCTTAGTAGAAAGGTGTCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGG
GATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAG
AGTAACGATTCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGTATGGCAAGCGGTTGAGTTCTCCTTATCCTCTGACGATGGACTTTTGTTTGAGAGACGCCTC
TGTGTGCCGTCAGATGGTGTGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTTCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAG
CGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTA
TTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTG
GTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGG
GTGCCAGTGTCGATTGTTTCTGATAGGGATGCCCGTTTCAATTCCAAATTCTGGAGTGGTTTGCAGAATACTATGGGCACGAGGTTAGACTTTAGTACAGCTTTC
CATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTCTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCAT
TTGATTGAATTTGCTTATAACAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGTAAATGTTGTAGAATGCATTTGCTGGGGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRVCTDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSEIDLRSGYHQLRIKDGDVPKTAFRS
RYGHYEFIVMPFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYARFSKCEFWLKHVSFLGHVVSKAGVSVDPAKIEA
VTGWTRPSTVSEVRSFLGLAGYYRWLVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYAS
RQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVSHSAALITRQAPLHR
DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDSYLVEKRGLAEVWQAVEFSLSSDDGLLFERRLCVPSDGVVKTELLSEAHSFPFSMHPGSTKMYQDLK
RVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHG
VPVSIVSDRDARFNSKFWSGLQNTMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLIEFAYNNSYQATIGMAPFEALYGKCCRMHLLG

Cmc11g0304411 (gene) of Melon (Charmono) v1.1 genome