; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc11g0307921 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0307921
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr11:29114387..29115139
RNA-Seq ExpressionCmc11g0307921
SyntenyCmc11g0307921
Gene Ontology termsNA
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.0e-12089.2Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
        MTSAKSCITPMSTSLDLYTIAPPFNDP +Y RLVGSLQYLTFT PDIA  VN VSQF+HKPTVIHFSAVKRILRYL GTPTLGIKFRKGSFSLQTFCDS+
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN

Query:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH
        WA DT DR STSGFIAFLGSNPISWSSKKQS VSRSSTEAEY SLATTT DLYWIRQL+CDLHVPLKTSPTLW DNVSAISLAHNP+FHARTKHI+IDYH
Subjt:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH

Query:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        FVW+KVL KDIS  YI SNNQLADILTKPLLSPTFL LRDKLLTQP+SSV
Subjt:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

KAA0054006.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.9e-10179.2Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
        MTSAKSCITPMSTSLDLYTIAPPFNDPS+YCRLV SLQYLTFT PDIAF VN VSQF+HKPTVIHFSAVKRIL+YL                        
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN

Query:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH
          GDT DR STSGFIAFLGSN ISWSSKKQSTVSRSST+AEY SLA TT DLYWIRQL+CDLHVPLKTSPTLW DNVS I LAHN +FHARTKHI+IDYH
Subjt:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH

Query:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        FV +KVLRKDIS RYISSNNQLADILTKPLLSPTFL LRDKLLTQP+SSV
Subjt:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

KAA0059709.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.8e-10180Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
        MTSAKSCITPMSTSLDLYTIAPPFNDPS+Y RLVGSLQYLTFTHPDIAFFVN  SQF+HKPTVIHFS VKRILRYL                        
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN

Query:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH
          GDT DR STS FIAFLGSNPISWSSKKQSTVS SSTEAEY SLATTTVDLYWIRQL+CDLHVPLKTSPTLW DNVSAISLAHNP+FHARTKHI+IDYH
Subjt:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH

Query:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        FV +KV+RKDIS  YI SNNQLADILTKPLLSPTFL LRDKLLTQ +SSV
Subjt:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

XP_016901044.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]2.3e-11287.92Show/hide
Query:  MSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSNWAGDTYDRCS
        MSTSLDLYTIAPPFNDPS+Y RL+GSLQYLTFT PDIAFFVN  SQF+HKPTVIHFS VKRILRYL GTP  GIKFRK  FSLQTFCD +WAGDT DR S
Subjt:  MSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSNWAGDTYDRCS

Query:  TSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYHFVWKKVLRKD
        TS FIAFLGSNPISWSSKKQSTVSRSSTEAEY SLATTTVDLYWIRQL+CDLHVPLKTSPTLW DNVSAISLAHNP+FHARTKHI+IDYHFV KKVLRKD
Subjt:  TSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYHFVWKKVLRKD

Query:  ISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        IS RYI SNNQLADILTKPLLSPTFL LRDKLLTQ +SSV
Subjt:  ISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

XP_016902250.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]1.4e-13899.2Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
        MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFT PDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN

Query:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH
        WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHAR KHIKIDYH
Subjt:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH

Query:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
Subjt:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

TrEMBL top hitse value%identityAlignment
A0A1S4DYI8 uncharacterized mitochondrial protein AtMg00810-like1.1e-11287.92Show/hide
Query:  MSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSNWAGDTYDRCS
        MSTSLDLYTIAPPFNDPS+Y RL+GSLQYLTFT PDIAFFVN  SQF+HKPTVIHFS VKRILRYL GTP  GIKFRK  FSLQTFCD +WAGDT DR S
Subjt:  MSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSNWAGDTYDRCS

Query:  TSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYHFVWKKVLRKD
        TS FIAFLGSNPISWSSKKQSTVSRSSTEAEY SLATTTVDLYWIRQL+CDLHVPLKTSPTLW DNVSAISLAHNP+FHARTKHI+IDYHFV KKVLRKD
Subjt:  TSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYHFVWKKVLRKD

Query:  ISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        IS RYI SNNQLADILTKPLLSPTFL LRDKLLTQ +SSV
Subjt:  ISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

A0A1S4E2P5 uncharacterized mitochondrial protein AtMg00810-like6.9e-13999.2Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
        MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFT PDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN

Query:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH
        WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHAR KHIKIDYH
Subjt:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH

Query:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
Subjt:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

A0A5A7TPR4 Putative mitochondrial protein1.4e-12089.2Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
        MTSAKSCITPMSTSLDLYTIAPPFNDP +Y RLVGSLQYLTFT PDIA  VN VSQF+HKPTVIHFSAVKRILRYL GTPTLGIKFRKGSFSLQTFCDS+
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN

Query:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH
        WA DT DR STSGFIAFLGSNPISWSSKKQS VSRSSTEAEY SLATTT DLYWIRQL+CDLHVPLKTSPTLW DNVSAISLAHNP+FHARTKHI+IDYH
Subjt:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH

Query:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        FVW+KVL KDIS  YI SNNQLADILTKPLLSPTFL LRDKLLTQP+SSV
Subjt:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

A0A5D3DAS3 Putative mitochondrial protein3.4e-10179.2Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
        MTSAKSCITPMSTSLDLYTIAPPFNDPS+YCRLV SLQYLTFT PDIAF VN VSQF+HKPTVIHFSAVKRIL+YL                        
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN

Query:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH
          GDT DR STSGFIAFLGSN ISWSSKKQSTVSRSST+AEY SLA TT DLYWIRQL+CDLHVPLKTSPTLW DNVS I LAHN +FHARTKHI+IDYH
Subjt:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH

Query:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        FV +KVLRKDIS RYISSNNQLADILTKPLLSPTFL LRDKLLTQP+SSV
Subjt:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

A0A5D3DR35 Putative mitochondrial protein8.8e-10280Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN
        MTSAKSCITPMSTSLDLYTIAPPFNDPS+Y RLVGSLQYLTFTHPDIAFFVN  SQF+HKPTVIHFS VKRILRYL                        
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSN

Query:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH
          GDT DR STS FIAFLGSNPISWSSKKQSTVS SSTEAEY SLATTTVDLYWIRQL+CDLHVPLKTSPTLW DNVSAISLAHNP+FHARTKHI+IDYH
Subjt:  WAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYH

Query:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV
        FV +KV+RKDIS  YI SNNQLADILTKPLLSPTFL LRDKLLTQ +SSV
Subjt:  FVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKLLTQPQSSV

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.8e-3636.69Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCR-LVGSLQYLTF-THPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKG---SFSLQT
        M +  +  TP+ + ++ Y +     D +  CR L+G L Y+   T PD+   VN +S++  K     +  +KR+LRYL+GT  + + F+K       +  
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCR-LVGSLQYLTF-THPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKG---SFSLQT

Query:  FCDSNWAGDTYDRCSTSGFI-AFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKH
        + DS+WAG   DR ST+G++      N I W++K+Q++V+ SSTEAEY +L     +  W++ L+  +++ L+    ++ DN   IS+A+NP  H R KH
Subjt:  FCDSNWAGDTYDRCSTSGFI-AFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKH

Query:  IKIDYHFVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKL
        I I YHF  ++V    I   YI + NQLADI TKPL +  F+ LRDKL
Subjt:  IKIDYHFVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-2936.86Show/hide
Query:  MTSAKSCITPMSTSLDL------YTIAPPFNDPSI-YCRLVGSLQY-LTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFS
        M +AK   TP++  L L       T+    N   + Y   VGSL Y +  T PDIA  V  VS+F+  P   H+ AVK ILRYLRGT    + F      
Subjt:  MTSAKSCITPMSTSLDL------YTIAPPFNDPSI-YCRLVGSLQY-LTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFS

Query:  LQTFCDSNWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHART
        L+ + D++ AGD  +R S++G++       ISW SK Q  V+ S+TEAEY +   T  ++ W+++ + +L +  K    ++ D+ SAI L+ N ++HART
Subjt:  LQTFCDSNWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHART

Query:  KHIKIDYHFVWKKVLRKDISFRYISSNNQLADILTK
        KHI + YH++ + V  + +    IS+N   AD+LTK
Subjt:  KHIKIDYHFVWKKVLRKDISFRYISSNNQLADILTK

P92519 Uncharacterized mitochondrial protein AtMg008103.4e-3449.68Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDS
        M   K   TP+   L+       + DPS +  +VG+LQYLT T PDI++ VN V Q +H+PT+  F  +KR+LRY++GT   G+   K S  ++Q FCDS
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDS

Query:  NWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYW
        +WAG T  R ST+GF  FLG N ISWS+K+Q TVSRSSTE EYR+LA T  +L W
Subjt:  NWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.4e-5849.8Show/hide
Query:  MTSAKSCITPMSTS--LDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKG-SFSLQTFC
        M +AK   TPM+ S  L LY+      DP+ Y  +VGSLQYL FT PDI++ VN +SQF+H PT  H  A+KRILRYL GTP  GI  +KG + SL  + 
Subjt:  MTSAKSCITPMSTS--LDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKG-SFSLQTFC

Query:  DSNWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKI
        D++WAGD  D  ST+G+I +LG +PISWSSKKQ  V RSSTEAEYRS+A T+ ++ WI  L+ +L + L   P ++ DNV A  L  NP+FH+R KHI I
Subjt:  DSNWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKI

Query:  DYHFVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKL
        DYHF+  +V    +   ++S+++QLAD LTKPL    F     K+
Subjt:  DYHFVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.3e-5748.98Show/hide
Query:  MTSAKSCITPMSTS--LDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKG-SFSLQTFC
        M +AK   TPM+TS  L L++      DP+ Y  +VGSLQYL FT PD+++ VN +SQ++H PT  H++A+KR+LRYL GTP  GI  +KG + SL  + 
Subjt:  MTSAKSCITPMSTS--LDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKG-SFSLQTFC

Query:  DSNWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKI
        D++WAGDT D  ST+G+I +LG +PISWSSKKQ  V RSSTEAEYRS+A T+ +L WI  L+ +L + L   P ++ DNV A  L  NP+FH+R KHI +
Subjt:  DSNWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKI

Query:  DYHFVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKL
        DYHF+  +V    +   ++S+++QLAD LTKPL    F     K+
Subjt:  DYHFVWKKVLRKDISFRYISSNNQLADILTKPLLSPTFLRLRDKL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-3541Show/hide
Query:  FNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKF-RKGSFSLQTFCDSNWAGDTYDRCSTSGFIAFLGSNP
        F D   Y RL+G L YL  T  DI+F VN +SQF   P + H  AV +IL Y++GT   G+ +  +    LQ F D+++      R ST+G+  FLG++ 
Subjt:  FNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKF-RKGSFSLQTFCDSNWAGDTYDRCSTSGFIAFLGSNP

Query:  ISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYHFVWKK-VLRKDISFRYISSNNQ
        ISW SKKQ  VS+SS EAEYR+L+  T ++ W+ Q   +L +PL     L+ DN +AI +A N +FH RTKHI+ D H V ++ V +  +S+ + + + Q
Subjt:  ISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYHFVWKK-VLRKDISFRYISSNNQ

ATMG00240.1 Gag-Pol-related retrotransposon family protein9.6e-0837.04Show/hide
Query:  YLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDSNWAGDTYDRCSTSGFIAFL
        YLT T PD+ F VN +SQF          AV ++L Y++GT   G+ +   S   L+ F DS+WA     R S +GF + +
Subjt:  YLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDSNWAGDTYDRCSTSGFIAFL

ATMG00810.1 DNA/RNA polymerases superfamily protein2.4e-3549.68Show/hide
Query:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDS
        M   K   TP+   L+       + DPS +  +VG+LQYLT T PDI++ VN V Q +H+PT+  F  +KR+LRY++GT   G+   K S  ++Q FCDS
Subjt:  MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDS

Query:  NWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYW
        +WAG T  R ST+GF  FLG N ISWS+K+Q TVSRSSTE EYR+LA T  +L W
Subjt:  NWAGDTYDRCSTSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTCGATCTTTATACAATTGCACCACCATTTAATGATCCATCAATCTATTGCAGACTAGTTGGTTCATT
GCAATATCTTACCTTCACTCATCCTGATATTGCATTCTTCGTAAATTGTGTCAGTCAGTTTATACATAAACCCACTGTCATTCACTTTTCAGCCGTCAAACGCATCCTCA
GATATCTTCGTGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCGTTCTCTCTACAAACCTTTTGTGATTCTAATTGGGCAGGTGATACATATGATCGATGTTCC
ACCTCCGGCTTCATCGCCTTCCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACAGTCTCTCGTTCCTCCACAGAAGCAGAATATCGTTCCCTTGCCAC
TACTACTGTCGATCTTTACTGGATCCGACAACTTGTATGTGATCTCCATGTTCCCCTTAAGACATCACCAACATTATGGTATGATAATGTTTCTGCTATATCTCTGGCTC
ATAATCCAATTTTTCATGCTCGCACTAAACACATTAAAATTGATTATCACTTTGTTTGGAAAAAAGTTCTTCGCAAAGACATCTCCTTTCGTTACATCTCTTCCAACAAC
CAACTTGCTGATATTCTCACCAAGCCACTCCTATCTCCTACATTCCTTCGTCTTCGAGACAAACTACTGACTCAACCCCAGTCATCCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTCGATCTTTATACAATTGCACCACCATTTAATGATCCATCAATCTATTGCAGACTAGTTGGTTCATT
GCAATATCTTACCTTCACTCATCCTGATATTGCATTCTTCGTAAATTGTGTCAGTCAGTTTATACATAAACCCACTGTCATTCACTTTTCAGCCGTCAAACGCATCCTCA
GATATCTTCGTGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCGTTCTCTCTACAAACCTTTTGTGATTCTAATTGGGCAGGTGATACATATGATCGATGTTCC
ACCTCCGGCTTCATCGCCTTCCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACAGTCTCTCGTTCCTCCACAGAAGCAGAATATCGTTCCCTTGCCAC
TACTACTGTCGATCTTTACTGGATCCGACAACTTGTATGTGATCTCCATGTTCCCCTTAAGACATCACCAACATTATGGTATGATAATGTTTCTGCTATATCTCTGGCTC
ATAATCCAATTTTTCATGCTCGCACTAAACACATTAAAATTGATTATCACTTTGTTTGGAAAAAAGTTCTTCGCAAAGACATCTCCTTTCGTTACATCTCTTCCAACAAC
CAACTTGCTGATATTCTCACCAAGCCACTCCTATCTCCTACATTCCTTCGTCTTCGAGACAAACTACTGACTCAACCCCAGTCATCCGTTTGA
Protein sequenceShow/hide protein sequence
MTSAKSCITPMSTSLDLYTIAPPFNDPSIYCRLVGSLQYLTFTHPDIAFFVNCVSQFIHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSNWAGDTYDRCS
TSGFIAFLGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNVSAISLAHNPIFHARTKHIKIDYHFVWKKVLRKDISFRYISSNN
QLADILTKPLLSPTFLRLRDKLLTQPQSSV