; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc11g0309331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0309331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionprotein SINE3
Genome locationCMiso1.1chr11:30078425..30087133
RNA-Seq ExpressionCmc11g0309331
SyntenyCmc11g0309331
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575120.1 hypothetical protein SDJN03_25759, partial [Cucurbita argyrosperma subsp. sororia]4.0e-7674.11Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        MEKRMKD QTPQR+Q  NRRSRKP KIAKCLTA+FSSLS+DKI   SK++ SPISVVSDVNQI DID     +  S+L  VNP  SACC +SL PDLSPS
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVV+FDN  LDKV V+FSGSND++E  AGS+ AEIAVNSL RALTQVL STDVDHQ+KKLIDAS+RIIVDDFLAIPQ+RD I QLIS KN VLS+ +FLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        IIVLA+AFF  S VKSSF GPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

XP_008458341.1 PREDICTED: uncharacterized protein LOC103497781 [Cucumis melo]3.8e-10696.43Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDS       SFLQGVNPEFSACCDTSLFPDLSPS
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        I+VLAIAFFVGSGVKSSFTGPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

XP_011657295.2 uncharacterized protein LOC105435846 [Cucumis sativus]6.9e-9285.27Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        MEKRMKDHQTPQREQTTNR SRKPQKIAKC +A+  SLSEDKIHSISKENSSPIS VSD+NQISDI S       SFLQGVNPEFSACCDTSLFPDLS S
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVVSFDNELLDKVS DFSGSND+NEASAGS+EAEIAVN +RRALTQVL STDVDHQSKKLIDASMRII DDFLAIPQ+RD+IAQLIS K +VL +CVFLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        IIVLA AFFVGSGV+SSFTGPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

XP_022959315.1 uncharacterized protein LOC111460327 isoform X1 [Cucurbita moschata]5.0e-7472.77Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        ME+RMKD QTPQR+Q  NRRSRKP KIAKCLTA+FSSLS+DKI   SK++ S ISVVSDVNQI DID        SFL  VNP  SACC +SL PDLSPS
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVV+FDN  LDKV V+FSGSND++E  AGS+ AEIAV+SL RALTQVL STDVDHQ+KKLIDAS+RIIVDDFLAIPQ+RD I Q+IS KN VLS+ +FLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        IIVLA+AFF  S VKSSF GPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

XP_038876305.1 uncharacterized protein LOC120068561 [Benincasa hispida]9.3e-8982.59Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        MEK+MKD+QTPQR+QT NRRSRKPQKIAKCLTA+FSSLS+DKI  ISKE+ SPISVV+D+NQI DIDS       +FLQGVNP FSA C+TSLF DLSPS
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVVSFDNE LDKV V+FSGSNDM+EASAGS+E +IAVNSLRRALTQVL STDVDHQSKKLIDASM IIVDDFLAIPQERD+IAQLISVKN+VLS+CVFLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        IIVLAIAFF+GSGVKSSF GPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

TrEMBL top hitse value%identityAlignment
A0A0A0KI59 Uncharacterized protein3.3e-9285.27Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        MEKRMKDHQTPQREQTTNR SRKPQKIAKC +A+  SLSEDKIHSISKENSSPIS VSD+NQISDI S       SFLQGVNPEFSACCDTSLFPDLS S
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVVSFDNELLDKVS DFSGSND+NEASAGS+EAEIAVN +RRALTQVL STDVDHQSKKLIDASMRII DDFLAIPQ+RD+IAQLIS K +VL +CVFLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        IIVLA AFFVGSGV+SSFTGPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

A0A1S4E1Y8 uncharacterized protein LOC1034977811.8e-10696.43Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDS       SFLQGVNPEFSACCDTSLFPDLSPS
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        I+VLAIAFFVGSGVKSSFTGPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

A0A5D3BTA3 Uncharacterized protein1.8e-10696.43Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDS       SFLQGVNPEFSACCDTSLFPDLSPS
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        I+VLAIAFFVGSGVKSSFTGPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

A0A6J1EQ83 uncharacterized protein LOC1114368222.1e-7068.75Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        MEKR K++QTP R+Q  NRRS+KP KI K LTA+FSS  +DKI  I KE+ SPISVVS+++QI DIDS       SFLQ VNP  S  C++SLFP+LSPS
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVV+FDN+ LDKV V+F GSN+++EASAGS+EAEIAVN LRRAL+QVL STDVDHQSKKLIDAS+RIIVD+FLAIPQERD I +LIS K++VLS+ +FLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        IIVL +AFF GSGV++ F GPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

A0A6J1H5Y6 uncharacterized protein LOC111460327 isoform X12.4e-7472.77Show/hide
Query:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS
        ME+RMKD QTPQR+Q  NRRSRKP KIAKCLTA+FSSLS+DKI   SK++ S ISVVSDVNQI DID        SFL  VNP  SACC +SL PDLSPS
Subjt:  MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPS

Query:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW
        SVV+FDN  LDKV V+FSGSND++E  AGS+ AEIAV+SL RALTQVL STDVDHQ+KKLIDAS+RIIVDDFLAIPQ+RD I Q+IS KN VLS+ +FLW
Subjt:  SVVSFDNELLDKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLW

Query:  IIVLAIAFFVGSGVKSSFTGPLPT
        IIVLA+AFF  S VKSSF GPLPT
Subjt:  IIVLAIAFFVGSGVKSSFTGPLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAGGATGAAAGACCATCAAACTCCACAGAGAGAACAAACCACAAATCGTAGATCAAGGAAGCCTCAGAAGATCGCCAAATGCTTGACTGCCTCATTTTCATC
ACTTTCCGAAGACAAAATCCACTCAATTTCGAAAGAGAACTCCTCTCCGATCTCTGTTGTCTCAGACGTCAATCAGATTTCAGATATTGATAGTTTGATCTCTATTCGTG
GAGTAAGTTTCTTGCAAGGTGTTAATCCGGAATTTTCTGCTTGCTGCGATACCTCGCTTTTTCCCGATTTATCTCCATCTTCAGTCGTCAGTTTTGACAATGAACTGCTT
GACAAGGTTTCAGTTGATTTTTCTGGATCTAATGATATGAATGAAGCAAGCGCGGGCTCATTAGAGGCAGAGATTGCTGTGAATTCTCTACGGCGTGCTTTAACTCAAGT
CCTGCTATCTACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCTATGCGTATCATTGTGGACGACTTCCTTGCTATACCTCAAGAGCGAGATCGGATTGCTC
AACTTATTTCTGTCAAAAATTATGTTCTCTCTATGTGTGTATTTCTGTGGATCATCGTCTTGGCTATAGCTTTCTTTGTCGGTTCGGGAGTCAAGAGCTCTTTCACTGGA
CCATTGCCAACTTGA
mRNA sequenceShow/hide mRNA sequence
TTTCAGAACTTCCCCAAAGTTTTCCCGCGATATCAAGAATGGAGAAAAGGATGAAAGACCATCAAACTCCACAGAGAGAACAAACCACAAATCGTAGATCAAGGAAGCCT
CAGAAGATCGCCAAATGCTTGACTGCCTCATTTTCATCACTTTCCGAAGACAAAATCCACTCAATTTCGAAAGAGAACTCCTCTCCGATCTCTGTTGTCTCAGACGTCAA
TCAGATTTCAGATATTGATAGTTTGATCTCTATTCGTGGAGTAAGTTTCTTGCAAGGTGTTAATCCGGAATTTTCTGCTTGCTGCGATACCTCGCTTTTTCCCGATTTAT
CTCCATCTTCAGTCGTCAGTTTTGACAATGAACTGCTTGACAAGGTTTCAGTTGATTTTTCTGGATCTAATGATATGAATGAAGCAAGCGCGGGCTCATTAGAGGCAGAG
ATTGCTGTGAATTCTCTACGGCGTGCTTTAACTCAAGTCCTGCTATCTACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCTATGCGTATCATTGTGGACGA
CTTCCTTGCTATACCTCAAGAGCGAGATCGGATTGCTCAACTTATTTCTGTCAAAAATTATGTTCTCTCTATGTGTGTATTTCTGTGGATCATCGTCTTGGCTATAGCTT
TCTTTGTCGGTTCGGGAGTCAAGAGCTCTTTCACTGGACCATTGCCAACTTGAACTTGAGAAGCAATCCATTGTTTAAGCATCAAAGATGTTCTAAACTACCAAGCACAT
GGTCTTCACTGATTCTTCGAGAAGTGTGTGCTATATAATTCTGAATTTGTAATATGATATTTTCTCTAATAATAACTAGTTCATTCTTTTTACTTGTCCTCCTAGTAAAA
TACATTGTCAATGAACTATGCAAATCTTTTTTCTTATTATTATTATTGCTGATCTCTTTTTGTGAGTATTGTTTAAGATTCTAATAGATTTGGTGGTAGTTGATACATAT
GAAATGATGATGGTAAATCCCAGTGGCTAAAGTCACTATGAAAAAGCTACTGGCCGTTCTCTGAAAGGCAGGACATGTACATGTTACCTTCCTTGTGGTTGTTTTATTGC
AAATAAATGTGGAATCAAATGACAATAATCAAGCTGTGGGCTCCTAAATCACCAGGCTTTTTCTGATGCTAATTTGCAATATATACAAATTTTACAGACCTGCATGCATG
CAACTGTGCCAGTCTTTTTCCTGGAGTAGAAGTATTCTTCGAGGGAGTAACCTTTCATAGAAGTTTATATTGATGAATTTTGACATAAATTCGACAAAATGTCAAAAGAA
TAGATTATCAATAATTTTCTACCAATGTCAGCCACGTGTAAAATTCCATTTAACTCCAAAACAAGTGTGAGGGTATGATGTTCCAATGAGATCTAGTTCCTTCCCCTTTC
TTATCAAACAAAACTACAATTTTTTCCTTCATTCGAATTCCTCTCCTTTCTTCTTTGCTCTCCTTCTTACTTCTTCTTTTTGCTCCTTGGTCTTACTCTGATTTGTTATA
CATTTTCGAGCTTATCTGATTTCAAAGATATCAGAAGAAGTACGAGGAGGAAAAGCAGCAAAGCTGAAAAAACATTGTAGAATCAAAACCAAATGGAAGAAGAAAAATGA
GTGGAAAAAATGTTGCTAAGAAGAGAAAAAAAGTTGCAAATCGAGGACCAAAAGAAAAGAGCAACAAGAGAAGAATAAATCGAGATGGTTTTGGCATTTTCATGAAGAGA
TTGCAAAGTAAAATGCCAACAAAACATATGTTTTCAAAATCAATCAAAAATTTCATTTTATCCTTTATTTTAACTGCTAATGTCATTTTATCCCATTTTTATTTTCTTCT
TTCTCTTCCTTATTTGGATGAATTGTATTTGAGAAAAATTATTTTTTAATGTTTTAT
Protein sequenceShow/hide protein sequence
MEKRMKDHQTPQREQTTNRRSRKPQKIAKCLTASFSSLSEDKIHSISKENSSPISVVSDVNQISDIDSLISIRGVSFLQGVNPEFSACCDTSLFPDLSPSSVVSFDNELL
DKVSVDFSGSNDMNEASAGSLEAEIAVNSLRRALTQVLLSTDVDHQSKKLIDASMRIIVDDFLAIPQERDRIAQLISVKNYVLSMCVFLWIIVLAIAFFVGSGVKSSFTG
PLPT