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Cmc11g0311121 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0311121
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionATP-dependent RNA helicase, putative
Genome locationCMiso1.1chr11:31204710..31207509
RNA-Seq ExpressionCmc11g0311121
SyntenyCmc11g0311121
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057022.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 [Cucumis melo var. makuwa]4.6e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

KAG6573294.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9, partial [Cucurbita argyrosperma subsp. sororia]4.6e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

XP_004148780.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 [Cucumis sativus]4.6e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

XP_023542287.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 [Cucurbita pepo subsp. pepo]4.6e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

XP_023542289.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X3 [Cucurbita pepo subsp. pepo]4.6e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

TrEMBL top hitse value%identityAlignment
A0A0A0LV75 Uncharacterized protein2.2e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

A0A1S3B6Y9 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X12.2e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

A0A5A7UME2 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X12.2e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

A0A6J1GSF3 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X22.2e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

A0A6J1GTZ5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X12.2e-2092.98Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q VASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRV FLTDGVLLREMM++PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

SwissProt top hitse value%identityAlignment
F4JRJ6 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH92.2e-1777.19Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q V++RVAEEMGV LGEEVGYTIRFED T   VT V FLTDGVL+REMM +PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

P24384 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP223.7e-1255Show/hide
Query:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        + + +VA RVAEE+G K+G +VGYTIRFED+T PD TR+ ++TDG+L RE + +P ++KY
Subjt:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

Q5RBD4 Probable ATP-dependent RNA helicase DHX355.1e-1463.33Show/hide
Query:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        + + TVA RVAEE G  LG EVGY IRF+D T+   TR+ FLTDG+L+REMM +PLLTKY
Subjt:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

Q8VY00 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH18.2e-1256.67Show/hide
Query:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        + + +VA+RVA+EMGVKLG EVGY+IRFED T+ D T + ++TDG+LLRE++  P L  Y
Subjt:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

Q9H5Z1 Probable ATP-dependent RNA helicase DHX355.1e-1463.33Show/hide
Query:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        + + TVA RVAEE G  LG EVGY IRF+D T+   TR+ FLTDG+L+REMM +PLLTKY
Subjt:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

Arabidopsis top hitse value%identityAlignment
AT1G27900.1 RNA helicase family protein1.7e-1256.67Show/hide
Query:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        + + +VA RVA+E+ V LGE+VGY IRFED T    TR+ +LTDGVLLRE ++NP+L  Y
Subjt:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

AT1G32490.1 RNA helicase family protein5.8e-1356.67Show/hide
Query:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        + + +VA+RVA+EMGVKLG EVGY+IRFED T+ D T + ++TDG+LLRE++  P L  Y
Subjt:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

AT1G32490.2 RNA helicase family protein5.8e-1356.67Show/hide
Query:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        + + +VA+RVA+EMGVKLG EVGY+IRFED T+ D T + ++TDG+LLRE++  P L  Y
Subjt:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY

AT3G62310.1 RNA helicase family protein1.3e-1255.74Show/hide
Query:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKYR
        + + +V+ RVAEEM V +GEEVGY+IRFED ++P  T + +LTDG+LLRE M +PLL +Y+
Subjt:  IISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKYR

AT4G18465.1 RNA helicase family protein1.6e-1877.19Show/hide
Query:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY
        Q V++RVAEEMGV LGEEVGYTIRFED T   VT V FLTDGVL+REMM +PLLTKY
Subjt:  QTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAGTTAATATTATTTCACAGACAGTTGCTTCTAGAGTGGCTGAAGAGATGGGTGTTAAGCTTGGAGAAGAAGTTGGTTATACCATCAGATTTGAAGATCTTAC
AAATCCAGATGTGACGAGGGTAAACTTTCTCACAGATGGTGTGTTACTCAGAGAGATGATGAACAATCCTCTTTTGACCAAGTATAGGTAA
mRNA sequenceShow/hide mRNA sequence
TAGCTTTCTGCAATTTTCTTTATTCAAGGAAAACTTTGGTCGTATTAGTTTCAAAATGACCATAAAGTTATTGTGTGAATTATGTCAACTGTCAAGGTTTAGGTTAACAT
AGAAAATAAATTTTAACTTTTTGTTTCAAGAAGTATGAAGTATGATACTTGGTAGTGGGAATGCTTGGGCTAAGTTTTCCCAATAAAGGTCTTATCAGCCCAGTTCTTTT
TCTGTTCACAGGAACTTTCAATTGAAAGTATAAAATCTTTTATTCTATTCCTTGACTGGGAATAGAAATTACTAGAGATGATATAAAGATTAATAGAACGGACTCTTCTG
AATACAAATTCCACCTTTAATTTTGTTTTTGTCATCGCATTTTCTGCCTGGAGTGTGTCCACCAACTAAACAGCAAATAACAATGAATTTAACCTTAGTTAGAACATATC
ATATTATTTGCTTCTCTAGTGCAGAAGAATCAAATATTAAAAAGAGGATATGAAATTTGTCCTTTCTACTATAATTGTAATTAAGTTTGGAAGTTATTACTTGTTTTCTG
TACTCAATTTGGGATAGTTTTTGTTGGAGCTGTTGCATCACCAACAATTATGGTATAAGGTAAGAATCCTTTGATATGCAACTAACTTTAGAGGGCTTGAAAGGCTTTGG
GGAAGGCGTGGGCAATGCTATGGCTAGGTTTCTATTCCTCTTTTGGGGTTGGCTTTTACTAATCTTTGTTATCACACTTTGTTTTTTATTCTCAACAATTGAACGTCTGT
TTGTACTTTTGGGGTTTTGCTTTTGTTTTTAAATGAAAAAAGTTAATATTATTTCACAGACAGTTGCTTCTAGAGTGGCTGAAGAGATGGGTGTTAAGCTTGGAGAAGAA
GTTGGTTATACCATCAGATTTGAAGATCTTACAAATCCAGATGTGACGAGGGTAAACTTTCTCACAGATGGTGTGTTACTCAGAGAGATGATGAACAATCCTCTTTTGAC
CAAGTATAGGTAATGAATTCATCTTTTTGTAGTGTGGTCTCGTTTTTTTAGAACTCAAGGACATAATGGTGGATGAAGCACATGAAAGGTCTATCTCAACTGACATGTTA
CTTGGTCTCTTGAAAAAGATTCAACGGCGACGACCCGATCTGCGATTGATTATCTCTTCTGCTACAATTGAGGCTAAATCAATGTCAACTTTCTTCCAAATGAGGTTTTG
CCAGAATCCATTGGAGCAGTGAAGTCATATTTGCAGCAATTCATTAATGTATAGAATTCATTGATGTATAGGCATTTTTGTAGGTTTGGTAGGAAAATTTATGGTTTAAA
TGTAATTATTTAAATAGCTTGTTCGTAACAAACCATATATGTACCAACACTTAAAGCGATATTATAAAATGTATGTAGGTTTATAT
Protein sequenceShow/hide protein sequence
MKKVNIISQTVASRVAEEMGVKLGEEVGYTIRFEDLTNPDVTRVNFLTDGVLLREMMNNPLLTKYR