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Cmc11g0312821 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0312821
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionShikimate dehydrogenase
Genome locationCMiso1.1chr11:32366636..32368699
RNA-Seq ExpressionCmc11g0312821
SyntenyCmc11g0312821
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT11648.1 Os10g0514550 [Oryza sativa Japonica Group]8.7e-3448.31Show/hide
Query:  IADSCFSDRSTSPTA--FHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFT
        + +S FS +STS  A   H        TKYS+C+    SP  IL P PNGI+ I LLPVTST + +PP     +NLSG+N+IG  H+FSS PISAT+KFT
Subjt:  IADSCFSDRSTSPTA--FHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFT

Query:  DVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITTAFKYVIFPKSSSSISSPCFLFPITSFISLYNFSCISGYFTRFAIIHCNDAAVVSVIASRNSEH
          P G  YPP+ ++SS  LCG+   PGGC   PS  TAF+Y IF  SSS ISS   L  +   IS ++   + G+ T  A+IHC+   +VSV ASRNSE 
Subjt:  DVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITTAFKYVIFPKSSSSISSPCFLFPITSFISLYNFSCISGYFTRFAIIHCNDAAVVSVIASRNSEH

Query:  NVMSSSS
        ++  SSS
Subjt:  NVMSSSS

KAB8113312.1 hypothetical protein EE612_052276 [Oryza sativa]2.4e-3146.86Show/hide
Query:  IADSCFSDRSTSPTA--FHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFT
        + +S FS +STS  A   H        TKYS+ +    SP  IL P PNGI+ I LLPVTST + +PP     +NLSG+N IG  H+ SS PISAT+KFT
Subjt:  IADSCFSDRSTSPTA--FHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFT

Query:  DVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITTAFKYVIFPKSSSSISSPCFLFPITSFISLYNFSCISGYFTRFAIIHCNDAAVVSVIASRNSEH
          P G  YPP+ ++SS  LCG+   PGGC   PS  TAF+Y I   SSS ISS   L  +   IS ++   + G+ T  A+IHC+   +VSV ASRNSE 
Subjt:  DVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITTAFKYVIFPKSSSSISSPCFLFPITSFISLYNFSCISGYFTRFAIIHCNDAAVVSVIASRNSEH

Query:  NVMSSSS
        ++  SSS
Subjt:  NVMSSSS

KAG8649971.1 hypothetical protein MANES_08G163522v8, partial [Manihot esculenta]3.9e-2660Show/hide
Query:  PSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITT
        P PG ILLP P GIIFISLLPV S ++        FKNLSGLNAIGS HTF SQPISAT+KF    FGT   PS+T SS+T CGN  CPGGC L+PS  T
Subjt:  PSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITT

Query:  AFKYVIFPKSSS--SISSPCFLFPITSFISLYNFS
        AF+Y I  K SS  S+SS     P TS IS+ +FS
Subjt:  AFKYVIFPKSSS--SISSPCFLFPITSFISLYNFS

OAY65110.1 hypothetical protein ACMD2_21637 [Ananas comosus]5.3e-3162.1Show/hide
Query:  AFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSS
        AFH   H K  TKYS+C+  NP PGHILLP P GII ISLLPV ST++ +PPS    +NLSG N+IGS  TF S PISATIKFT  PFGT Y PS  L +
Subjt:  AFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSS

Query:  VTLCGNNICPGGCLLSPSITTAFK
        VT+CGN  C GGCL +PS  TAF+
Subjt:  VTLCGNNICPGGCLLSPSITTAFK

OAY85406.1 hypothetical protein ACMD2_13927 [Ananas comosus]1.5e-3061.29Show/hide
Query:  AFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSS
        AFH   H K  TKYS+C+  +P PGHILLPAP GII ISLLPV ST++ +PPS    +NLSG N++GS  TF S PISATIKFT  PFGT Y PS  L +
Subjt:  AFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSS

Query:  VTLCGNNICPGGCLLSPSITTAFK
        VT+CGN  C GGCL +PS  TAF+
Subjt:  VTLCGNNICPGGCLLSPSITTAFK

TrEMBL top hitse value%identityAlignment
A0A0E0EZV5 Uncharacterized protein7.7e-3648.79Show/hide
Query:  IADSCFSDRSTS--PTAFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFT
        + +S FS +STS   TAFH        TKYS+C+   PSP  ILLP PNGII  S LPVTST + +PP+    +N SG+N+IG  H+ SS PISAT+KFT
Subjt:  IADSCFSDRSTS--PTAFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFT

Query:  DVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITTAFKYVIFPKSSSSISSPCFLFPITSFISLYNFSCISGYFTRFAIIHCNDAAVVSVIASRNSEH
          P G  YPP+ ++SS  LCG+    GGCL  PS  TAF+Y +   SSS ISS      +   IS ++   + G+ T  A+IHC+  AVVSV A RNSE 
Subjt:  DVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITTAFKYVIFPKSSSSISSPCFLFPITSFISLYNFSCISGYFTRFAIIHCNDAAVVSVIASRNSEH

Query:  NVMSSSS
        ++ SSSS
Subjt:  NVMSSSS

A0A0P0XW62 Os10g0514550 protein4.2e-3448.31Show/hide
Query:  IADSCFSDRSTSPTA--FHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFT
        + +S FS +STS  A   H        TKYS+C+    SP  IL P PNGI+ I LLPVTST + +PP     +NLSG+N+IG  H+FSS PISAT+KFT
Subjt:  IADSCFSDRSTSPTA--FHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFT

Query:  DVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITTAFKYVIFPKSSSSISSPCFLFPITSFISLYNFSCISGYFTRFAIIHCNDAAVVSVIASRNSEH
          P G  YPP+ ++SS  LCG+   PGGC   PS  TAF+Y IF  SSS ISS   L  +   IS ++   + G+ T  A+IHC+   +VSV ASRNSE 
Subjt:  DVPFGTLYPPSKTLSSVTLCGNNICPGGCLLSPSITTAFKYVIFPKSSSSISSPCFLFPITSFISLYNFSCISGYFTRFAIIHCNDAAVVSVIASRNSEH

Query:  NVMSSSS
        ++  SSS
Subjt:  NVMSSSS

A0A0P0XWM5 Os10g0514425 protein1.5e-2354.76Show/hide
Query:  TKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSSVTLCGNNICPG
        TKYS+CN     P HIL P PNGI+ I LLPV ST + +PP     +NLSG+N IG  H+ SS PISAT+KFT  P G  YPP+ ++SS  LCG+   P 
Subjt:  TKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSSVTLCGNNICPG

Query:  GCLLSPSITTAFKYVIFPKSSSSISS
        GC   PS  TAF+Y IF  SSS ISS
Subjt:  GCLLSPSITTAFKYVIFPKSSSSISS

A0A199UKJ9 Uncharacterized protein2.6e-3162.1Show/hide
Query:  AFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSS
        AFH   H K  TKYS+C+  NP PGHILLP P GII ISLLPV ST++ +PPS    +NLSG N+IGS  TF S PISATIKFT  PFGT Y PS  L +
Subjt:  AFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSS

Query:  VTLCGNNICPGGCLLSPSITTAFK
        VT+CGN  C GGCL +PS  TAF+
Subjt:  VTLCGNNICPGGCLLSPSITTAFK

A0A199W839 Uncharacterized protein7.4e-3161.29Show/hide
Query:  AFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSS
        AFH   H K  TKYS+C+  +P PGHILLPAP GII ISLLPV ST++ +PPS    +NLSG N++GS  TF S PISATIKFT  PFGT Y PS  L +
Subjt:  AFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPSKTLSS

Query:  VTLCGNNICPGGCLLSPSITTAFK
        VT+CGN  C GGCL +PS  TAF+
Subjt:  VTLCGNNICPGGCLLSPSITTAFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGCAGACTCTTGCTTCTCAGACAGATCAACTTCCCCAACAGCCTTCCACTTGAAATTCCACATTAAATTCCCAACAAAATACTCCAAATGCAATAACCCCAATCC
AAGTCCAGGACATATCCTCCTCCCTGCCCCAAATGGCATCATCTTTATTTCCTTACTCCCCGTTACATCAACTTCCAACTCAACCCCTCCCTCTACTTTATCGTTCAAGA
ATCTCTCCGGCTTGAACGCCATCGGTTCCGGCCATACTTTCTCATCCCAACCCATATCCGCTACCATAAAGTTCACCGATGTTCCTTTCGGCACCCTGTATCCTCCTTCC
AAAACACTGTCCTCTGTCACCTTATGTGGCAATAACATATGCCCCGGGGGATGCCTTCTTAGTCCCTCCATTACTACTGCTTTCAAATATGTCATCTTCCCCAAATCTTC
CTCTTCTATTTCTTCACCCTGCTTCTTGTTTCCCATCACTTCTTTTATCTCCTTGTACAACTTCTCCTGTATCTCTGGATACTTCACTAGATTTGCCATTATCCATTGCA
ACGACGCAGCCGTTGTATCGGTTATCGCGTCGAGAAACTCAGAACATAATGTTATGAGTTCATCGTCTACTAATTTCCTCTTTTTCTTCTCATCATTGTTATCCGCAATT
TCTAAATCAAATAAAGTATCAACATAA
mRNA sequenceShow/hide mRNA sequence
CTTTGTTATAAGTATTTAAGACTAAATAAACCCTACATTTTCAAGATGAATAATCAAAAGAGGACATGAAGGACATTCCTATTCCCACCTCGTGAACATCTCTAACGGTC
TCTCGAGGTTCGAGCTCTTACATAATTAAGAAACATCAGCTTTTGGAGAGACAGATGAACAAGCAAATGGATATTTCATAGTGACAGCAGATTATTGCTTCCCAAGAAAA
ATTCAACTTCTCAAACGTCAAACCTCAAAATCATTTATGTTTGGATTTTAAATTAAGGCATTCATACACGTCTGTTCGAATACTTAACAAGTAAATAAACTAACAAATTA
AACATTAGCTTAGCTTCTTGGCGACAAGTAAGCAAGCAATGGATATTTCATAATGATAGCAGACTCTTGCTTCTCAGACAGATCAACTTCCCCAACAGCCTTCCACTTGA
AATTCCACATTAAATTCCCAACAAAATACTCCAAATGCAATAACCCCAATCCAAGTCCAGGACATATCCTCCTCCCTGCCCCAAATGGCATCATCTTTATTTCCTTACTC
CCCGTTACATCAACTTCCAACTCAACCCCTCCCTCTACTTTATCGTTCAAGAATCTCTCCGGCTTGAACGCCATCGGTTCCGGCCATACTTTCTCATCCCAACCCATATC
CGCTACCATAAAGTTCACCGATGTTCCTTTCGGCACCCTGTATCCTCCTTCCAAAACACTGTCCTCTGTCACCTTATGTGGCAATAACATATGCCCCGGGGGATGCCTTC
TTAGTCCCTCCATTACTACTGCTTTCAAATATGTCATCTTCCCCAAATCTTCCTCTTCTATTTCTTCACCCTGCTTCTTGTTTCCCATCACTTCTTTTATCTCCTTGTAC
AACTTCTCCTGTATCTCTGGATACTTCACTAGATTTGCCATTATCCATTGCAACGACGCAGCCGTTGTATCGGTTATCGCGTCGAGAAACTCAGAACATAATGTTATGAG
TTCATCGTCTACTAATTTCCTCTTTTTCTTCTCATCATTGTTATCCGCAATTTCTAAATCAAATAAAGTATCAACATAAGGGATTGGTTTCCCAGTTTCTTCATTATCTT
TGATTGTTGTTCTGTTCTTTCTTGCTTTGTTAATCAAAGGTAACAACAAATCGTCTTGCCGTTTACGTAGCTGACGAATCTCAGCCCATCGTTTCTTGAACAAAATCTTC
CCCAATCTTACTGGCCAGAAATTAAGATCATTGAATTTATTGATATTCAACAAAATCCCACGTTGAGATTCTCGTACTTCATTAATAAACTTCTCATCAAACCTCTCCCC
AAAACACATAACTGTAGCTAAACAATACATTGCATAACGAATATGATCCATGACCTTCACAGGCTCAGCAGCCGATGTTTGGCGGAGGCGATGAACCAGAACATCCAACG
TCCATTTACGTGAAACCGAATGAGCTTTCAAACGAGACGGATGGAGAAGCTCATACGTGAGGTTACGGCGGAGGGCACGCCATGTAGGACCATAGAAGGCAGTGCTAATA
TTATGCTGATTACTAGTAATGATTTTGGCTGTTTCCATGACGGGGAAACGGTCAGCAAAGATGGCGCCGTTTTGGACCAAAGCATGGTGAGAAACAGAGTGGCTAGCTAT
GAAAATGGAAGGGGTGTTACCAAAGTGAAGGGTTACAACTGGGCCATATTTGGAATGGTAATGACGAAGGATGGTTTCAAGTTCAGAAAGAGGCTTGAAAAGCCAAATGG
GATTGCCTATAAACGGCAGAGAAAGAGGACCAGGTGGAAGTTTTTGTTTGTTGCGATGGGAAATATAGCTCAAAATTAAGTGAAAGATTGCACAGATGGGAAGGGCAGCA
ATGAGAGCTATTACCAAACCATTATCCATTCTTCCTTTTTGCTTTCACTGCAACTTATGATCTCTCTCTCCTTTTCCTTTCATTTTTATAATGGGAAAGAGAGAGACCAT
AGAGTTACAATATGACAACATTATTGAAATGGTTAAAAGTCATTTTTATGTGTATTCATCCTACTCATTCTCCCTCTAAAACAC
Protein sequenceShow/hide protein sequence
MIADSCFSDRSTSPTAFHLKFHIKFPTKYSKCNNPNPSPGHILLPAPNGIIFISLLPVTSTSNSTPPSTLSFKNLSGLNAIGSGHTFSSQPISATIKFTDVPFGTLYPPS
KTLSSVTLCGNNICPGGCLLSPSITTAFKYVIFPKSSSSISSPCFLFPITSFISLYNFSCISGYFTRFAIIHCNDAAVVSVIASRNSEHNVMSSSSTNFLFFFSSLLSAI
SKSNKVST