; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc11g0312991 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0312991
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTPR_REGION domain-containing protein
Genome locationCMiso1.1chr11:32454166..32458855
RNA-Seq ExpressionCmc11g0312991
SyntenyCmc11g0312991
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR003107 - HAT (Half-A-TPR) repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039891.1 TPR_11 domain-containing protein [Cucumis melo var. makuwa]1.4e-18795.86Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
        MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD

Query:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR
        SVNFKSSNKFSRGLKRS+LQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDG+GF GDLRKEMYLAR
Subjt:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR

Query:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKR--------KGDLRRAEEYYSRAILMDSQDGEILSKYAKLV
        GLGIGGGPGDGGGGGRLH+GGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYK         KGDL RAEEYYSRAILMDSQDGEILSKYAKLV
Subjt:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKR--------KGDLRRAEEYYSRAILMDSQDGEILSKYAKLV

Query:  WELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA
        WELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKE ATKTYTAAATA
Subjt:  WELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA

KGN46380.2 hypothetical protein Csa_005429 [Cucumis sativus]1.6e-15985.31Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
        MLLKSSSTPLLGSLLPPDHHHH  DL GKHSPSTFPFHCNNKPLSFSTTTASL+SSP+FSDHHRA APSGFRRTNSEGNLNT+SHAS+VIDVHEDPFS D
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD

Query:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR
        SVNFKSS KF  GLKRS+LQTIPSFSFYGSR RTEE EEEEEDREID +EEED LGNF I+AA++TPEVRAMEQAWSRVGAGGDG+GFVGDLRKEMYLAR
Subjt:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR

Query:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ
        GLGIGGGP                    EYGMEEYYKKMVVENP NALVLSNYAEFLY+RKGDL RAEEYYSRAILMDS DGE LSKYAKLVWELHHDQQ
Subjt:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ

Query:  KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA
        KA+SYFQRALQASP DSHVQAAYANFLWETEENEDEQS+ KETATKTYTAAATA
Subjt:  KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA

XP_004140576.2 uncharacterized protein LOC101206684 [Cucumis sativus]1.2e-17090.4Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
        MLLKSSSTPLLGSLLPPDHHHH  DL GKHSPSTFPFHCNNKPLSFSTTTASL+SSP+FSDHHRA APSGFRRTNSEGNLNT+SHAS+VIDVHEDPFS D
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD

Query:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR
        SVNFKSS KF  GLKRS+LQTIPSFSFYGSR RTEE EEEEEDREID +EEED LGNF I+AA++TPEVRAMEQAWSRVGAGGDG+GFVGDLRKEMYLAR
Subjt:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR

Query:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ
        GLGIGGGPGDGGGGGRL  GGGGGGGGEEYGMEEYYKKMVVENP NALVLSNYAEFLY+RKGDL RAEEYYSRAILMDS DGE LSKYAKLVWELHHDQQ
Subjt:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ

Query:  KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA
        KA+SYFQRALQASP DSHVQAAYANFLWETEENEDEQS+ KETATKTYTAAATA
Subjt:  KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA

XP_008459965.1 PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]1.3e-193100Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
        MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD

Query:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR
        SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR
Subjt:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR

Query:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ
        GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ
Subjt:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ

Query:  KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA
        KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA
Subjt:  KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA

XP_038874350.1 uncharacterized protein LOC120067050 isoform X1 [Benincasa hispida]3.5e-13073.9Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKH----SPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDP
        MLLKSSSTPLL SLLPPDHHH   D V KH    SP  F FHCNNK LSFS T ASLNSSPSFS       P+GFRRT+SEGNLNT+SHA +VIDVHEDP
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKH----SPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDP

Query:  FSSDSVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGI------NAAVITPEVRAMEQAWSRVGAGGDGIGFVG
        FS DS NFK SN  S  LKRS+LQTIPSFSFY SR RTEED ++++D+  D EE+ED LG+FGI      +AA++TPEV+AME AW+      DGIGFVG
Subjt:  FSSDSVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGI------NAAVITPEVRAMEQAWSRVGAGGDGIGFVG

Query:  DLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAK
        D +KEMYL   LGI GG GDGGGGGR  +GGGGGGGGE++GMEEYYKKMV+ENPGNALVLSNYAEFLY+R+GDLR AEEYYSRAILMD+QDGEILSKYAK
Subjt:  DLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAK

Query:  LVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA
        LVWELHHDQQKA++YFQRALQASPHDS+VQAAYANFLWETEE+EDE S+GK  AT+TYTAAAT+
Subjt:  LVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA

TrEMBL top hitse value%identityAlignment
A0A0A0KA70 TPR_REGION domain-containing protein6.5e-15189.31Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
        MLLKSSSTPLLGSLLPPDHHHH  DL GKHSPSTFPFHCNNKPLSFSTTTASL+SSP+FSDHHRA APSGFRRTNSEGNLNT+SHAS+VIDVHEDPFS D
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD

Query:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR
        SVNFKSS KF  GLKRS+LQTIPSFSFYGSR RTEE EEEEEDREID +EEED LGNF I+AA++TPEVRAMEQAWSRVGAGGDG+GFVGDLRKEMYLAR
Subjt:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR

Query:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ
        GLGIGGGPGDGGGGGRL  GGGGGGGGEEYGMEEYYKKMVVENP NALVLSNYAEFLY+RKGDL RAEEYYSRAILMDS DGE LSKYAKLVWELHHDQQ
Subjt:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ

Query:  KAISYFQRALQASPHDSH
        KA+SYFQRALQASP D +
Subjt:  KAISYFQRALQASPHDSH

A0A1S3CCM7 uncharacterized protein LOC1034989236.2e-194100Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
        MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD

Query:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR
        SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR
Subjt:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR

Query:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ
        GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ
Subjt:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ

Query:  KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA
        KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA
Subjt:  KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA

A0A2P5D0K6 Signal transduction response regulator6.7e-6346.84Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTA------SLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHE
        MLL+SSSTP+LGSLLP      +N      +  T   HC++K LSF  T +      S NSSP  S      +  GFRR  SEGNL  ++ +S    ++E
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTA------SLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHE

Query:  DPFSSDSVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEED--------DLGNFG-----------------INAAVITPEV
        D F    +      KF+R  K  +LQTIPSFSFY SR   E++EEEE     DTEE E+        + G  G                 +N    T EV
Subjt:  DPFSSDSVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEED--------DLGNFG-----------------INAAVITPEV

Query:  RAMEQAWSRVGAGGDGIGFVGDLRKEMYLARGL--GIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRA
        R  ++ W+ VG   +       +  +MYLA+GL  G+GGG G GGG G  +  G GG  G++ G+EEYYK+MV ENPGN L L NYA+FLY+ KGDLR A
Subjt:  RAMEQAWSRVGAGGDGIGFVGDLRKEMYLARGL--GIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRA

Query:  EEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKT
        EEYYSRAIL D +DG++LS+YAKLVW+LH+DQ  A SYF+RA+QASP DSHV AAYANFLWETE++EDE  + +E    T
Subjt:  EEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKT

A0A5A7TE10 TPR_11 domain-containing protein6.7e-18895.86Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
        MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSD

Query:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR
        SVNFKSSNKFSRGLKRS+LQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDG+GF GDLRKEMYLAR
Subjt:  SVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLAR

Query:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKR--------KGDLRRAEEYYSRAILMDSQDGEILSKYAKLV
        GLGIGGGPGDGGGGGRLH+GGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYK         KGDL RAEEYYSRAILMDSQDGEILSKYAKLV
Subjt:  GLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKR--------KGDLRRAEEYYSRAILMDSQDGEILSKYAKLV

Query:  WELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA
        WELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKE ATKTYTAAATA
Subjt:  WELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA

A0A7N2MKH3 TPR_REGION domain-containing protein3.8e-6649.05Show/hide
Query:  MLLKSSSTPLLGSLLP-----PDH----HHHHNDLVGKHSPSTFPFHCNNK-------PLSFSTTTASLNS-SPSFSDHHRAPAPSGFRRTNSEGNLNTI
        MLL+SSSTP+LGSLLP     P+H    H+  N+++ KH P T P + NN+       PL+ S  + + +  SPS +D  R     GFRR  S+GNL  +
Subjt:  MLLKSSSTPLLGSLLP-----PDH----HHHHNDLVGKHSPSTFPFHCNNK-------PLSFSTTTASLNS-SPSFSDHHRAPAPSGFRRTNSEGNLNTI

Query:  SHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEE-DREIDTEEEEDD-----------LGNFGINAAVITPEVRA
        ++AS     +ED +    +      KFS   K ++LQTI SFSFY S+   E++E+EEE DRE D EEE ++           L N  +N+ ++T EV  
Subjt:  SHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEE-DREIDTEEEEDD-----------LGNFGINAAVITPEVRA

Query:  MEQAWSRVGAGGDGIGFVGDLRKE-MYLARGLGIGGGPGDGGG--GGRLHTGGGG--GGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRR
         +Q W+       GIG   +L  + M+LARG+GIGG  G GGG  GGR H GG G    G +  G+EEYYK+MV ENPGN L L NYA+FLY+ K DL+ 
Subjt:  MEQAWSRVGAGGDGIGFVGDLRKE-MYLARGLGIGGGPGDGGG--GGRLHTGGGG--GGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRR

Query:  AEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENED
        AEE YSRAIL D +DGEILS+YAKL+WELHHDQ +A+SYF+RA+QASP DSHVQAAYA+FLW+TEE E+
Subjt:  AEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.9e-2349.11Show/hide
Query:  GGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYAN
        G ++    +YYK M+ E P + L+L NYA+FL + KGDL  AEEYY +  +++  DG  L+ Y +LV +LH D+ KA+SYF+RA+QASP DS V AAYA+
Subjt:  GGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYAN

Query:  FLWETEENEDEQ
        FLWE   ++D++
Subjt:  FLWETEENEDEQ

AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-2948.61Show/hide
Query:  GGGPGDGGGGGRLHTGGGG-GGGGEEYGMEE-----YYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHD
        GGG G GG GG +  GGGG GG G + G  E     YY++M+  NPGN+L+  NYA+FL + KGD+++AEEY  RAIL ++ DG +LS YA L+   H D
Subjt:  GGGPGDGGGGGRLHTGGGG-GGGGEEYGMEE-----YYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHD

Query:  QQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKE
        +Q+A SY+++A++ SP D +VQA+YA FLW+ +E+E+++++G+E
Subjt:  QQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKE

AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.5e-2543.21Show/hide
Query:  AGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQ
        A G G    G L  E     G G+GGG G  GG G     GGGGG  ++  + +YY++M+  NP N+L+L NY +FLY+ + D   AEEYY RAIL +  
Subjt:  AGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQ

Query:  DGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKE
        DGE LS Y +L+WE   D+++A  YF +A+ ASP+D  V  +YA F+WE E+++D+    +E
Subjt:  DGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKE

AT4G32340.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.5e-2650Show/hide
Query:  GPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDS-QDGEILSKYAKLVWELHHDQQKAISY
        G  +GG GGR   G GGGGGG    ++ YY++M+   PG+ L+LSNYA FL + KGD R+AEEY  RA+L +S +DGE+LS Y  L+W+ H D  +A SY
Subjt:  GPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDS-QDGEILSKYAKLVWELHHDQQKAISY

Query:  FQRALQASPHDSHVQAAYANFLWETEENEDEQ
        + +A+Q+SP D +V A+YA FLW+ EE  +E+
Subjt:  FQRALQASPHDSHVQAAYANFLWETEENEDEQ

AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.6e-2744.17Show/hide
Query:  DGIGFVGDLRKEMY--LARGLGIGGGPGDGGGGGRLHTGGGG-------GGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRA
        +GIGF G +R   Y  ++  L        GGGGG  H GG G       GG G +   + +Y+KM+  NPGN + LSNYA+FL + + D  +AEEY  RA
Subjt:  DGIGFVGDLRKEMY--LARGLGIGGGPGDGGGGGRLHTGGGG-------GGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRA

Query:  ILMDSQDGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQ
        IL+   DG +L+ YA+LVW++H D  +A +YF +A+ A+P D +VQA+YA FLW+ EE E+E+
Subjt:  ILMDSQDGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTCAAAAGCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCCCCTGACCACCATCACCACCACAATGACCTCGTCGGGAAACACTCCCCTTCCACTTTCCCTTT
CCACTGCAATAATAAACCGCTTTCTTTCTCCACCACCACTGCTTCTCTTAACTCATCCCCTTCTTTCTCCGACCATCATCGCGCCCCGGCTCCATCTGGCTTTCGGAGAA
CCAACTCCGAAGGGAATTTGAATACTATTTCCCATGCTTCTAATGTAATTGATGTCCATGAAGATCCGTTTTCTTCTGATTCCGTAAATTTCAAATCCTCTAATAAGTTT
TCCCGTGGCCTCAAACGCTCTGTTCTCCAGACTATTCCCTCGTTTTCCTTCTACGGTTCTAGAGTTAGGACTGAAGAAGATGAGGAGGAGGAGGAGGATCGAGAGATTGA
TACGGAGGAAGAGGAAGATGATTTGGGGAATTTTGGCATTAACGCTGCCGTGATAACTCCGGAGGTTAGGGCTATGGAACAAGCTTGGAGTAGAGTGGGTGCTGGTGGTG
ATGGGATTGGTTTTGTGGGTGATTTACGGAAGGAGATGTATCTGGCTAGAGGACTCGGCATCGGAGGAGGACCGGGTGATGGTGGCGGTGGTGGTCGACTGCATACTGGA
GGCGGGGGTGGAGGAGGAGGTGAAGAATATGGGATGGAGGAGTATTACAAGAAAATGGTGGTGGAGAATCCGGGGAATGCTCTTGTTTTGAGTAACTATGCGGAGTTCTT
GTACAAGAGGAAAGGAGACCTGCGAAGAGCAGAAGAGTATTACAGCAGAGCCATTTTAATGGATTCCCAAGATGGAGAAATTTTGTCAAAATATGCCAAGTTAGTGTGGG
AGTTGCATCATGACCAACAAAAAGCTATATCCTATTTTCAAAGGGCTCTGCAAGCTTCTCCACATGACAGCCATGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACA
GAGGAGAATGAAGATGAACAAAGCATAGGAAAAGAGACAGCAACAAAAACTTACACGGCAGCTGCAACTGCTTGA
mRNA sequenceShow/hide mRNA sequence
GTGAAAGGGAAGGGAAAAGGTTGTTTTTCCGTGAGGGGACACCGACCTTTTTTTTTTTTATCGGTATCTTCCATTGCCATCTGCTGATCTTCATCCACTCCCTCCCTCAT
AAAACAATCAAATATCTTCTAAACTCAACAAAATCATAATTATGCTCCTCAAAAGCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCCCCTGACCACCATCACCACCAC
AATGACCTCGTCGGGAAACACTCCCCTTCCACTTTCCCTTTCCACTGCAATAATAAACCGCTTTCTTTCTCCACCACCACTGCTTCTCTTAACTCATCCCCTTCTTTCTC
CGACCATCATCGCGCCCCGGCTCCATCTGGCTTTCGGAGAACCAACTCCGAAGGGAATTTGAATACTATTTCCCATGCTTCTAATGTAATTGATGTCCATGAAGATCCGT
TTTCTTCTGATTCCGTAAATTTCAAATCCTCTAATAAGTTTTCCCGTGGCCTCAAACGCTCTGTTCTCCAGACTATTCCCTCGTTTTCCTTCTACGGTTCTAGAGTTAGG
ACTGAAGAAGATGAGGAGGAGGAGGAGGATCGAGAGATTGATACGGAGGAAGAGGAAGATGATTTGGGGAATTTTGGCATTAACGCTGCCGTGATAACTCCGGAGGTTAG
GGCTATGGAACAAGCTTGGAGTAGAGTGGGTGCTGGTGGTGATGGGATTGGTTTTGTGGGTGATTTACGGAAGGAGATGTATCTGGCTAGAGGACTCGGCATCGGAGGAG
GACCGGGTGATGGTGGCGGTGGTGGTCGACTGCATACTGGAGGCGGGGGTGGAGGAGGAGGTGAAGAATATGGGATGGAGGAGTATTACAAGAAAATGGTGGTGGAGAAT
CCGGGGAATGCTCTTGTTTTGAGTAACTATGCGGAGTTCTTGTACAAGAGGAAAGGAGACCTGCGAAGAGCAGAAGAGTATTACAGCAGAGCCATTTTAATGGATTCCCA
AGATGGAGAAATTTTGTCAAAATATGCCAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTATATCCTATTTTCAAAGGGCTCTGCAAGCTTCTCCACATGACA
GCCATGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAGGAGAATGAAGATGAACAAAGCATAGGAAAAGAGACAGCAACAAAAACTTACACGGCAGCTGCAACT
GCTTGAGATGAAAGTGAATGGCAACTTCTTTTTCTTGTTTCCTTCGTTGTAGAATAATCCCATCATCATTGATAATAAACATTGTTGCAGCATATTCAAATTTGTTCCAT
GTTTCTGCAATGCAATGTTAGTGAAGAAACAAACAAGAACAGACAGAGGTAGTAGGGAGAAAGCAAACAAGTTTCAGTATAAGATTTAATGAAAAGGATCATCATCTCTC
AAGTCTTTTTCCCTCACATTGCCTAACAAGTGCTTGTACTTGAAATGCCAAAATTTCCCCACTTGAATTGCATCTTAAAAAACCATCCAAGGGGGAAAAGTACCATCTTA
TCTTAATAATCAATTCCTCACAAATTAACATTTCCAGTAATGTCAACTCACACGCTCAAAAACACAAACTACAAACCAATTCCTAAACCACTCAACATCGGAGACGCTGC
TTTTTCTCTGAACCATCAAACGTAGTAACCACCTTCCATATCAAAAACTCTTCCAAAGTTTCATCTCCATAATGGTTATAAACAAACTGGTACTGATTGATTGATGATAC
TATTGAACCTTGTGGTAACCCCGCTGAGGGAAACCATTGCCTCTCAACCGACCGTAGTCACTTCCATCCTGGCTGCTTCCTCGACCCAAACTACGAGAACCAAATCGTCC
CCTGGGGGCATCTGACTGGTAACTACCTCTCCCTCTTCCCCTTCCTGTTCATGGCACCACCAACAAATGCATCAGAAACTATCCATGTGAGCCAATCCAAACAAATCATC
AATAGCAAGGATATGCAAAGTGCTTATTGATGAACTAGGAAAAGCATATATAGACTGGACGAGGTGGGCATCGACAATTTCAGAACAGCCAATTGCAGCAATTTGATGGA
TTTCATTTTGACGAGAAACAATGTAGTAGGTTCGGGAGCATATGATGGTGCAGGGTTTACGTGTTGAGGGGCTGGTTCTGGAATGTGGTTCCAGTCAGAAGTAGCCGGAG
CACTTGGATAAAATGATGGTTGTGGAATAGCTG
Protein sequenceShow/hide protein sequence
MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKF
SRGLKRSVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTG
GGGGGGGEEYGMEEYYKKMVVENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKAISYFQRALQASPHDSHVQAAYANFLWET
EENEDEQSIGKETATKTYTAAATA