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Cmc11g0313341 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0313341
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionABC transporter ATP-binding protein ARB1
Genome locationCMiso1.1chr11:32687452..32688165
RNA-Seq ExpressionCmc11g0313341
SyntenyCmc11g0313341
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsIPR003439 - ABC transporter-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2286926.1 hypothetical protein Bca52824_046530 [Brassica carinata]5.6e-0775.61Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV
        MGTRVAIVGPNGAGKSTLLNLLAGDLVPT    G +Q+ ++
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV

KAG4183452.1 hypothetical protein ERO13_A09G110551v2 [Gossypium hirsutum]5.0e-0855.41Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPSINGGNTSSVSSSSLSRSRRS
        MGTRVAIVGPNGAGKSTLLNL+AGDLVPT      +Q+ ++  +   +     +  GG+ S+VS+SS SRSRR+
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPSINGGNTSSVSSSSLSRSRRS

TYI10307.1 hypothetical protein ES332_A09G133100v1 [Gossypium tomentosum]5.0e-0855.41Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPSINGGNTSSVSSSSLSRSRRS
        MGTRVAIVGPNGAGKSTLLNL+AGDLVPT      +Q+ ++  +   +     +  GG+ S+VS+SS SRSRR+
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPSINGGNTSSVSSSSLSRSRRS

XP_013636625.1 PREDICTED: ABC transporter F family member 4-like [Brassica oleracea var. oleracea]5.6e-0775.61Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV
        MGTRVAIVGPNGAGKSTLLNLLAGDLVPT    G +Q+ ++
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV

XP_024458495.1 ABC transporter F family member 4 [Populus trichocarpa]8.6e-0864.81Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPS
        MGT VAIVGPNG GKSTLLNLL GDL+PT     S  ES+VE+W+V+A+ C  S
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPS

TrEMBL top hitse value%identityAlignment
A0A078FFN9 BnaC04g26200D protein2.7e-0775.61Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV
        MGTRVAIVGPNGAGKSTLLNLLAGDLVPT    G +Q+ ++
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV

A0A0D3BY27 Uncharacterized protein2.7e-0775.61Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV
        MGTRVAIVGPNGAGKSTLLNLLAGDLVPT    G +Q+ ++
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV

A0A3P6CJ12 Uncharacterized protein2.7e-0775.61Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV
        MGTRVAIVGPNGAGKSTLLNLLAGDLVPT    G +Q+ ++
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV

A0A5D2P1Y8 ABC transporter domain-containing protein2.4e-0855.41Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPSINGGNTSSVSSSSLSRSRRS
        MGTRVAIVGPNGAGKSTLLNL+AGDLVPT      +Q+ ++  +   +     +  GG+ S+VS+SS SRSRR+
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPSINGGNTSSVSSSSLSRSRRS

A0A7N2LZC1 Uncharacterized protein4.6e-0775.61Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV
        MGTRVAIVGPNGAGKSTLLNLLAGDLVPT      +Q+S++
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV

SwissProt top hitse value%identityAlignment
O93796 Elongation factor 33.2e-0563.33Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTS
        + +R+A++GPNGAGKSTL+N+L G+L+PTS
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTS

P16521 Elongation factor 3A3.2e-0563.33Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTS
        + +R+A++GPNGAGKSTL+N+L G+L+PTS
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTS

P53978 Elongation factor 3B3.2e-0563.33Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTS
        + +R+A++GPNGAGKSTL+N+L G+L+PTS
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTS

Q3SQ65 Hemin import ATP-binding protein HmuV3.2e-0577.42Show/hide
Query:  GTRVAIVGPNGAGKSTLLNLLAGDLVPTSNR
        G  VAIVGPNGAGKSTLL LL+GDL PT  R
Subjt:  GTRVAIVGPNGAGKSTLLNLLAGDLVPTSNR

Q9M1H3 ABC transporter F family member 43.6e-0973.17Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV
        MGTRVAIVGPNGAGKSTLLNLLAGDLVPT      +Q+ ++
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV

Arabidopsis top hitse value%identityAlignment
AT1G64550.1 general control non-repressible 31.6e-0441.94Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPSINGGNTSS
        + +R+A+VGPNG GKST+L L++GDL P+S      + +KV     VA F +  ++G + SS
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPSINGGNTSS

AT3G54540.1 general control non-repressible 42.6e-1073.17Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV
        MGTRVAIVGPNGAGKSTLLNLLAGDLVPT      +Q+ ++
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKV

AT5G60790.1 ABC transporter family protein4.2e-0568.97Show/hide
Query:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPT
        + +RVA+VGPNGAGKSTLL L+ G+L PT
Subjt:  MGTRVAIVGPNGAGKSTLLNLLAGDLVPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACACGTGTTGCTATTGTCGGACCGAATGGAGCAGGAAAATCAACTCTTTTGAATCTGCTAGCAGGTGATCTCGTTCCAACTTCCAACAGAAGGGGAAGT
ACGCAGGAGTCAAAAGTTGAGAATTGGGAGGTAGTCGCAACATTTTGTAGACCTTCTATCAATGGAGGAAACACCAGTTCAGTGTCTTCTTCGTCTTTATCCCGA
TCAAGACGGTCTAAGCAAACAGGAAGCTGTTCGTGCTAA
mRNA sequenceShow/hide mRNA sequence
GAGGCCCCCAGAAAATGGAGAGATTACAGTATAGAGTTCCACTTCCCTGAACCCACAGAGCTCACCCCACCATTATTACAATTGATTGAATTCAATTTCAGTTAT
CCAAATAGGAAAGGTTTTAGACTTTCTGAAGTCGATGTAGGCATTGACATGGGAACACGTGTTGCTATTGTCGGACCGAATGGAGCAGGAAAATCAACTCTTTTG
AATCTGCTAGCAGGTGATCTCGTTCCAACTTCCAACAGAAGGGGAAGTACGCAGGAGTCAAAAGTTGAGAATTGGGAGGTAGTCGCAACATTTTGTAGACCTTCT
ATCAATGGAGGAAACACCAGTTCAGTGTCTTCTTCGTCTTTATCCCGATCAAGACGGTCTAAGCAAACAGGAAGCTGTTCGTGCTAAGTTAGGCAAATTCGGACT
CCCTAGTCACAATATCACCTCACCCAAATTGCTAAATTATCTGGAGGACGGAAAGCCACAGTTGTTTTTACATCAATTCCCATGTCAAAGCCTCACATATTACTG
CTTGATGAACCTACAAATCACTTAGATGTGCAACGTACTGATGCATTAGCAGATGCCTTAGATGAATTCAGTGGTGGAGTCGTTTGGTTAGCCATGATTCAAGAC
TCATATCAAGTGTGTGTGAGGATGAAGAAAAAAGTGAAATTTGGGTGGGTTGAAAACTTGAAATGGTAGCGTAGAATCATTCCT
Protein sequenceShow/hide protein sequence
MGTRVAIVGPNGAGKSTLLNLLAGDLVPTSNRRGSTQESKVENWEVVATFCRPSINGGNTSSVSSSSLSRSRRSKQTGSCSC