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Cmc11g0313541 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0313541
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRNA-binding ASCH domain protein, putative isoform 1
Genome locationCMiso1.1chr11:32799825..32800727
RNA-Seq ExpressionCmc11g0313541
SyntenyCmc11g0313541
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039933.1 RNA-binding ASCH domain protein, putative isoform 1 [Cucumis melo var. makuwa]8.2e-73100Show/hide
Query:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
        MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
Subjt:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG

Query:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ
        TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ
Subjt:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ

TYK24569.1 RNA-binding ASCH domain protein, putative isoform 1 [Cucumis melo var. makuwa]6.3e-7399.28Show/hide
Query:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
        MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
Subjt:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG

Query:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQV
        TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ+
Subjt:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQV

XP_008460026.1 PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo]6.3e-7399.28Show/hide
Query:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
        MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
Subjt:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG

Query:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQV
        TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ+
Subjt:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQV

XP_038906823.1 uncharacterized protein LOC120092732 isoform X1 [Benincasa hispida]2.9e-5487.8Show/hide
Query:  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEI
        MIKLED +QE LKFVLQSSTNGTLDFDLGL  AFCS LLK DPSTSNPLPDS AGVPPYPLY+RLTLALWESLCSGTFCPMY++MS+KNGESSLKQKEEI
Subjt:  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEI

Query:  WLKLIMDKGSEMVQVSSRCSFLF
        WLKLIMDKGSEMVQVS RC+F F
Subjt:  WLKLIMDKGSEMVQVSSRCSFLF

XP_038906832.1 uncharacterized protein LOC120092732 isoform X6 [Benincasa hispida]2.9e-5487.8Show/hide
Query:  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEI
        MIKLED +QE LKFVLQSSTNGTLDFDLGL  AFCS LLK DPSTSNPLPDS AGVPPYPLY+RLTLALWESLCSGTFCPMY++MS+KNGESSLKQKEEI
Subjt:  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEI

Query:  WLKLIMDKGSEMVQVSSRCSFLF
        WLKLIMDKGSEMVQVS RC+F F
Subjt:  WLKLIMDKGSEMVQVSSRCSFLF

TrEMBL top hitse value%identityAlignment
A0A0A0KBT7 ASCH domain-containing protein3.5e-5390.52Show/hide
Query:  IMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEE
        ++IKLEDCVQELLKFVLQSSTNGT DFDLGLS+AFCS L KHDPSTSNPLP SKAGVPPYPLYERL+LALWESLCSGTFCPMYEKM MKNGESSLKQKEE
Subjt:  IMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEE

Query:  IWLKLIMDKGSEMVQV
        +WLKLIMDKGSEMVQ+
Subjt:  IWLKLIMDKGSEMVQV

A0A1S3CBK8 uncharacterized protein LOC103498964 isoform X13.0e-7399.28Show/hide
Query:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
        MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
Subjt:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG

Query:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQV
        TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ+
Subjt:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQV

A0A5A7TA51 RNA-binding ASCH domain protein, putative isoform 14.0e-73100Show/hide
Query:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
        MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
Subjt:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG

Query:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ
        TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ
Subjt:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ

A0A5D3DMP1 RNA-binding ASCH domain protein, putative isoform 13.0e-7399.28Show/hide
Query:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
        MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG
Subjt:  MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSG

Query:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQV
        TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ+
Subjt:  TFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQV

A0A6J1GPX1 uncharacterized protein LOC111456052 isoform X22.6e-4880.16Show/hide
Query:  SSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKN
        +SCP    S IMIK+EDCVQELL+FVLQSS NGTLDFDLGLSTAFCS LLKHDPS SNPLPDS AGVPPYPLY+RL+ ALWES+C G+FCPMY++M M N
Subjt:  SSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKN

Query:  GESSLKQKEEIWLKLIMDKGSEMVQV
        GESSLKQKEE WLKLIMDKGSEMV++
Subjt:  GESSLKQKEEIWLKLIMDKGSEMVQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43465.1 RNA-binding ASCH domain protein1.6e-1844.26Show/hide
Query:  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLL-----KHD----PSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGE
        MIK+ DC+ E++KF L    +  ++FD+GL+  FCS LL      HD     S+S  L    +GVP YPLY+ L L L +S+ SG+FC  +EK+S+    
Subjt:  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLL-----KHD----PSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGE

Query:  SSLKQKEEIWLKLIMDKGSEMV
          LK+KE+ W KLI  KGSE+V
Subjt:  SSLKQKEEIWLKLIMDKGSEMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAAACAACAAACTTGAGTACCCATCATCGATCTTCATCTTGTCCAGAAGGCTCTCCGTCTCCGATTATGATCAAACTCGAGGATTGTGTGCAGGAGCTGCTCAA
GTTTGTTCTGCAATCATCCACTAATGGAACGCTAGACTTTGATTTGGGTCTCTCCACTGCCTTCTGCTCTGTTCTCCTTAAACATGATCCTTCCACTTCCAATCCATTAC
CAGACTCCAAAGCAGGTGTTCCTCCATATCCTTTATACGAACGCTTAACGTTAGCTTTGTGGGAATCTCTCTGTTCTGGCACTTTCTGTCCAATGTATGAGAAAATGTCA
ATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGTTGAAGCTGATTATGGATAAGGGATCTGAAATGGTACAGGTAAGTAGTAGATGTAGTTTTCTTTT
TTGTAGTATCTGA
mRNA sequenceShow/hide mRNA sequence
AAGGATTGTGTGCCATCATCGATCTACAGTGATATTTGTTGTTTGCAAACATGACTAAAACAACAAACTTGAGTACCCATCATCGATCTTCATCTTGTCCAGAAGGCTCT
CCGTCTCCGATTATGATCAAACTCGAGGATTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCAATCATCCACTAATGGAACGCTAGACTTTGATTTGGGTCTCTCCACTGC
CTTCTGCTCTGTTCTCCTTAAACATGATCCTTCCACTTCCAATCCATTACCAGACTCCAAAGCAGGTGTTCCTCCATATCCTTTATACGAACGCTTAACGTTAGCTTTGT
GGGAATCTCTCTGTTCTGGCACTTTCTGTCCAATGTATGAGAAAATGTCAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGTTGAAGCTGATTATG
GATAAGGGATCTGAAATGGTACAGGTAAGTAGTAGATGTAGTTTTCTTTTTTGTAGTATCTGATAAGATCGAATTTCTCCTGCGTTAAAAGACTTTTATTTCAGCAGATG
CTTAAAACTATTAACCTTGATCTTTATATCGATGAGCCTTTCTTTA
Protein sequenceShow/hide protein sequence
MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMS
MKNGESSLKQKEEIWLKLIMDKGSEMVQVSSRCSFLFCSI