CuGenDBv2

Gene ID	Cmc12g0314941
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Genome location	CMiso1.1chr12:311359..311859
RNA-Seq Expression	Cmc12g0314941
Synteny	Cmc12g0314941
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]

7.7e-64

92.19

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Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHL NRM SRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP+QTKFT RAQACVFVGYPLHQ  YKCFHPPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVT
        KYFVTMDVTFCENRPYF VSHLQGE+V+
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVT

KAA0059989.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]

3.7e-66

82.35

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Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP QTKFTHRAQACVFVGYPLHQR YKCF+PPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVTMDVTFCENRSSSHNLNHKPSSLENI
        KYFVTMDVTFCENRPYF VSHLQGESV+      E+ ++   +   PS++ +I
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVTMDVTFCENRSSSHNLNHKPSSLENI

KAA0067540.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.0e-64

92.97

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Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHL NRM SRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP+QTKFT RAQACVFVGYPLHQR YKCFHPPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVT
        KYFVTMDVTFCENRPYF VSHLQGE+V+
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVT

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

7.7e-64

92.19

Show/hide

Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHL NRM SRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP+QTKFT RAQACVFVGYPLHQ  YKCFHPPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVT
        KYFVTMDVTFCENRPYF VSHLQGE+V+
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVT

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

7.7e-64

92.19

Show/hide

Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHL NRM SRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP+QTKFT RAQACVFVGYPLHQ  YKCFHPPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVT
        KYFVTMDVTFCENRPYF VSHLQGE+V+
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVT

TrEMBL top hits

e value

%identity

Alignment

A0A5A7V2E9 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8

1.8e-66

82.35

Show/hide

Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP QTKFTHRAQACVFVGYPLHQR YKCF+PPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVTMDVTFCENRSSSHNLNHKPSSLENI
        KYFVTMDVTFCENRPYF VSHLQGESV+      E+ ++   +   PS++ +I
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVTMDVTFCENRSSSHNLNHKPSSLENI

A0A5A7VK49 Beta-galactosidase

9.8e-65

92.97

Show/hide

Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHL NRM SRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP+QTKFT RAQACVFVGYPLHQR YKCFHPPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVT
        KYFVTMDVTFCENRPYF VSHLQGE+V+
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVT

A0A5A7VLQ7 Beta-galactosidase

3.7e-64

92.19

Show/hide

Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHL NRM SRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP+QTKFT RAQACVFVGYPLHQ  YKCFHPPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVT
        KYFVTMDVTFCENRPYF VSHLQGE+V+
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVT

A0A5D3BJK7 Beta-galactosidase

3.7e-64

92.19

Show/hide

Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHL NRM SRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP+QTKFT RAQACVFVGYPLHQ  YKCFHPPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVT
        KYFVTMDVTFCENRPYF VSHLQGE+V+
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVT

A0A5D3C4T4 Beta-galactosidase

3.7e-64

92.19

Show/hide

Query:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR
        MLSTSLPSYLWGDAILTAAHL NRM SRILHLQTPLDCLKESYPSTRLV EVPLRVFGCTAYVHNFGP+QTKFT RAQACVFVGYPLHQ  YKCFHPPSR
Subjt:  MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSR

Query:  KYFVTMDVTFCENRPYFSVSHLQGESVT
        KYFVTMDVTFCENRPYF VSHLQGE+V+
Subjt:  KYFVTMDVTFCENRPYFSVSHLQGESVT

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

9.6e-09

30.52

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Query:  LPSYLWGDAILTAAHLTNRMSSRIL--HLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSRKYF
        L    WG+A+LTA +L NR+ SR L    +TP +      P  +      LRVFG T YVH     Q KF  ++   +FVGY      +K +   + K+ 
Subjt:  LPSYLWGDAILTAAHLTNRMSSRIL--HLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSRKYF

Query:  VTMDVTFCENRPYFSVSHLQGESVTMDVTFCENRSSSHNLNHKPSSLENILQEE
        V  DV   E       + +   +V  +  F ++   S N N  P+    I+Q E
Subjt:  VTMDVTFCENRPYFSVSHLQGESVTMDVTFCENRSSSHNLNHKPSSLENILQEE

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

3.9e-10

28.85

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Query:  LPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSRKYFVT
        LP   WG+A+ TA +L NR  S  L  + P     E   + + V    L+VFGC A+ H     +TK   ++  C+F+GY   +  Y+ + P  +K   +
Subjt:  LPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSRKYFVT

Query:  MDVTFCENRPYFSVSHLQGESVTMDVTFCENRSSSHNLNHKPSSLENILQEESHKG
         DV F E+    +    +     +   F    S+S+N    P+S E+   E S +G
Subjt:  MDVTFCENRPYFSVSHLQGESVTMDVTFCENRSSSHNLNHKPSSLENILQEESHKG

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTTTCCACTTCCCTTCCATCATACCTGTGGGGAGATGCTATTCTTACAGCCGCTCATTTAACCAATAGAATGTCTTCTCGTATCCTCCACCTTCAGACTCCCTTAGA
TTGTCTTAAGGAGTCTTACCCCTCTACTCGCCTTGTTTTAGAGGTTCCTCTTCGTGTGTTTGGGTGTACCGCTTATGTCCATAATTTTGGCCCTGATCAGACCAAATTTA
CCCATCGAGCTCAGGCTTGTGTGTTTGTTGGATATCCCCTTCACCAGCGCGATTATAAATGTTTTCACCCGCCGTCTAGGAAATACTTTGTCACTATGGATGTTACTTTC
TGTGAGAATCGACCCTACTTTTCCGTTAGCCATCTTCAGGGGGAGAGTGTCACTATGGATGTTACTTTCTGTGAGAATCGATCCTCATCCCATAATCTTAACCACAAACC
AAGTTCCCTGGAAAACATATTACAGGAGGAATCTCATAAAGGAAGTTGGGTCCCCTACTAG

mRNA sequence

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Protein sequence

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MLSTSLPSYLWGDAILTAAHLTNRMSSRILHLQTPLDCLKESYPSTRLVLEVPLRVFGCTAYVHNFGPDQTKFTHRAQACVFVGYPLHQRDYKCFHPPSRKYFVTMDVTF
CENRPYFSVSHLQGESVTMDVTFCENRSSSHNLNHKPSSLENILQEESHKGSWVPY

Cmc12g0314941 (gene) of Melon (Charmono) v1.1 genome