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Cmc12g0315531 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0315531
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPHD finger-like domain-containing protein 5B
Genome locationCMiso1.1chr12:692330..696400
RNA-Seq ExpressionCmc12g0315531
SyntenyCmc12g0315531
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
InterPro domainsIPR005345 - PHF5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4080914.1 unnamed protein product [Lactuca saligna]6.2e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

KAG7019124.1 PHD finger-like domain-containing protein 5B, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

NP_001235659.1 PHD finger-like domain-containing protein 5A-like [Glycine max]6.2e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

THU49754.1 hypothetical protein C4D60_Mb06t12860 [Musa balbisiana]6.2e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

XP_022679553.1 PHD finger-like domain-containing protein 5B isoform X1 [Setaria italica]6.2e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

TrEMBL top hitse value%identityAlignment
A0A1S3VFD8 PHD finger-like domain-containing protein 5B3.0e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

A0A1U7WEQ8 PHD finger-like domain-containing protein 5B3.0e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

A0A1U8I119 PHD finger-like domain-containing protein 5B3.0e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

A0A6J1I5N2 PHD finger-like domain-containing protein 5B3.0e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

C5XAZ5 Uncharacterized protein3.0e-62100Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

SwissProt top hitse value%identityAlignment
P0DI19 PHD finger-like domain-containing protein 5A1.1e-6499.09Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

P83870 PHD finger-like domain-containing protein 5A1.2e-6091.82Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

P83871 PHD finger-like domain-containing protein 5A1.2e-6091.82Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

Q0WMV8 PHD finger-like domain-containing protein 5B1.1e-6499.09Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

Q7RTV0 PHD finger-like domain-containing protein 5A1.2e-6091.82Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

Arabidopsis top hitse value%identityAlignment
AT1G07170.1 PHF5-like protein7.6e-6699.09Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

AT1G07170.2 PHF5-like protein7.6e-6699.09Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

AT1G07170.3 PHF5-like protein7.6e-6699.09Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR

AT2G30000.1 PHF5-like protein7.6e-6699.09Show/hide
Query:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
        MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY
Subjt:  MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFY

Query:  ERKKYGFKKR
        ERKKYGFKKR
Subjt:  ERKKYGFKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGCATCATCCTGATTTGATAATGTGCAGAAAACAGCCAGGAATTGCAATTGGCCGCCTATGTGAGAAGTGCGATGGGAAGTGTGTAATCTGTGATTCTTATGT
CCGACCCTGTACGCTTGTTCGTGTTTGTGACGAATGCAATTACGGGTCTTTCCAAGGCCGTTGTGTGATCTGTGGAGGAGTAGGAATTTCAGATGCTTACTACTGCAAAG
AGTGTACACAGCAGGAGAAAGATAGAGATGGATGCCCAAAGATTGTTAATTTAGGCAGTGCAAAAACAGATTTGTTCTATGAACGTAAGAAATATGGGTTCAAGAAACGA
TGA
mRNA sequenceShow/hide mRNA sequence
TGTAAGAGAAAAACCCTAAACTCTTTCATCTGTGCTCAAAGCCCACTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCAGGACGTCTCCTCCTCCTTTTCAGCAGCTCAGCC
TCGCCTCCGCGGTCGCCGTCTACTTTCTTCTGTTCGTGCCGCCGGAGCCTCCCCTAGCGGTTTTTTACTGATTTTCTCACCCATTATTACTGGTTACAAATTTTACTGGG
ACTTGATAGATTGTTGCGGTTGCATAAGCCATGGCCAAGCATCATCCTGATTTGATAATGTGCAGAAAACAGCCAGGAATTGCAATTGGCCGCCTATGTGAGAAGTGCGA
TGGGAAGTGTGTAATCTGTGATTCTTATGTCCGACCCTGTACGCTTGTTCGTGTTTGTGACGAATGCAATTACGGGTCTTTCCAAGGCCGTTGTGTGATCTGTGGAGGAG
TAGGAATTTCAGATGCTTACTACTGCAAAGAGTGTACACAGCAGGAGAAAGATAGAGATGGATGCCCAAAGATTGTTAATTTAGGCAGTGCAAAAACAGATTTGTTCTAT
GAACGTAAGAAATATGGGTTCAAGAAACGATGAAGCAAAAACACATTGAGTTTCCTTCCTAAGATGGATCTTACTGTAATATGATGAATTTCTGACATCTAATCTCAAAA
CTCTCTTAGACATGTATGTATATGCTGATGAGTCAGAATGAGAACAGTTGTTGGGGCTAAGGCTATTCATAAGAATTAAAACTTTATCGATTGTATTGTGTCTTTGAGTA
CAACTGTGGCAGACAGATTGAACCATCGACTT
Protein sequenceShow/hide protein sequence
MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR