; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0317871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0317871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr12:3223917..3225071
RNA-Seq ExpressionCmc12g0317871
SyntenyCmc12g0317871
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.2e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

KAA0037582.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.2e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.2e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

TYK06334.1 putative polyprotein [Cucumis melo var. makuwa]9.2e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

TYK27507.1 reverse transcriptase [Cucumis melo var. makuwa]9.2e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

TrEMBL top hitse value%identityAlignment
A0A5A7T1Y5 Reverse transcriptase4.4e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

A0A5A7U2V7 Reverse transcriptase4.4e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

A0A5A7UNA3 Reverse transcriptase4.4e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

A0A5D3BHI1 Reverse transcriptase4.4e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

A0A5D3BS67 Reverse transcriptase4.4e-19592.45Show/hide
Query:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
        MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ                     RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK
Subjt:  MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQ---------------------RKEVVFRKPGFAEVVFRGMRKAVSRSLISVLK

Query:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW
        AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVF DDLSGLPPDREIEFTIELLPGTAPIS+APYRM PSELKELKMQLQELVDKGYIRPSVS W
Subjt:  AEKLLRKGCTAFLAHIVVVQREKLKPEDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSW

Query:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
        GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRG ALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL
Subjt:  GAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDL

Query:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN
        MNRIFHRYLDQFVIVFIDDILVYS+DRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVS+DPQKVEA+VN
Subjt:  MNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.6e-4335.25Show/hide
Query:  KPEDVPVVKEFLDVFLD-DLSGLP-PDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQ
        +PE   + KEF D+  + +   LP P + +EF +EL      +    Y + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ 
Subjt:  KPEDVPVVKEFLDVFLD-DLSGLP-PDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQ

Query:  LNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILV
        LNK    N YPLP I+ L  +++G  +F+K+DL+S YH ++VR+ D  K AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL+
Subjt:  LNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILV

Query:  YSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIV
        +S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ ++
Subjt:  YSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIV

P0CT35 Transposon Tf2-2 polyprotein2.6e-4335.25Show/hide
Query:  KPEDVPVVKEFLDVFLD-DLSGLP-PDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQ
        +PE   + KEF D+  + +   LP P + +EF +EL      +    Y + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ 
Subjt:  KPEDVPVVKEFLDVFLD-DLSGLP-PDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQ

Query:  LNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILV
        LNK    N YPLP I+ L  +++G  +F+K+DL+S YH ++VR+ D  K AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL+
Subjt:  LNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILV

Query:  YSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIV
        +S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ ++
Subjt:  YSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIV

P0CT41 Transposon Tf2-12 polyprotein2.6e-4335.25Show/hide
Query:  KPEDVPVVKEFLDVFLD-DLSGLP-PDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQ
        +PE   + KEF D+  + +   LP P + +EF +EL      +    Y + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ 
Subjt:  KPEDVPVVKEFLDVFLD-DLSGLP-PDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQ

Query:  LNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILV
        LNK    N YPLP I+ L  +++G  +F+K+DL+S YH ++VR+ D  K AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDIL+
Subjt:  LNKVTIRNKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILV

Query:  YSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIV
        +S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ ++
Subjt:  YSIDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.1e-4639.92Show/hide
Query:  KEFLDVFLDDLSGLPPDRE---IEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQLNKVTIR
        +++ ++  +DL   P D     ++  IE+ PG       PY +T    +E+   +Q+L+D  +I PS S   +PV+ V KKDGT RLC+DYR LNK TI 
Subjt:  KEFLDVFLDDLSGLPPDRE---IEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQLNKVTIR

Query:  NKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSIDRES
        + +PLPRID+L  ++    +F+ +DL SGYHQ+ +   D  KTAF T  G YE+ VMPFGL NAP+ F   M   F     +FV V++DDIL++S   E 
Subjt:  NKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSIDRES

Query:  HEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAI
        H +HL  VL+ L+ + L  K  KC+F  E+  FLG+ +  + ++    K  AI
Subjt:  HEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAI

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.1e-4639.92Show/hide
Query:  KEFLDVFLDDLSGLPPDRE---IEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQLNKVTIR
        +++ ++  +DL   P D     ++  IE+ PG       PY +T    +E+   +Q+L+D  +I PS S   +PV+ V KKDGT RLC+DYR LNK TI 
Subjt:  KEFLDVFLDDLSGLPPDRE---IEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQLNKVTIR

Query:  NKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSIDRES
        + +PLPRID+L  ++    +F+ +DL SGYHQ+ +   D  KTAF T  G YE+ VMPFGL NAP+ F   M   F     +FV V++DDIL++S   E 
Subjt:  NKYPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSIDRES

Query:  HEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAI
        H +HL  VL+ L+ + L  K  KC+F  E+  FLG+ +  + ++    K  AI
Subjt:  HEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAI

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein2.6e-0647.17Show/hide
Query:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSIDPQKVEAIV
        HL +VLQ   + Q YA   KC F   Q+ +LG  H++S +GVS DP K+EA+V
Subjt:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSIDPQKVEAIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGAGCCTTTATCTGAGGGGTTAGCTATATACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTACGTAATTGTGAAGTTTTAGTAGAAGGTATC
AGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGAAGGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTTTTTAGAGGTATGAGGAAGGCCGTT
TCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCGTAGTAGTGCAGAGAGAAAAGCTAAAGCCA
GAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCTAGATGATCTGTCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTGAATTATTACCAGGA
ACAGCACCTATTTCAGAGGCCCCGTATAGAATGACTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGT
GTTTCGTCGTGGGGAGCACCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAG
TATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGACCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAA
TCAGATATTGCTAAGACAGCATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTTATG
AACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGATTGACAGAGAATCTCATGAGGAACATCTGAGGATT
GTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGA
GTTAGTATCGATCCACAAAAAGTAGAAGCAATTGTCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAGAGCCTTTATCTGAGGGGTTAGCTATATACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTACGTAATTGTGAAGTTTTAGTAGAAGGTATC
AGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCAGAGGAAGGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTTTTTAGAGGTATGAGGAAGGCCGTT
TCTAGAAGTTTAATCTCAGTTTTGAAAGCTGAGAAATTACTGAGGAAGGGTTGCACAGCGTTTCTTGCACACATCGTAGTAGTGCAGAGAGAAAAGCTAAAGCCA
GAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCTAGATGATCTGTCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACCATTGAATTATTACCAGGA
ACAGCACCTATTTCAGAGGCCCCGTATAGAATGACTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGT
GTTTCGTCGTGGGGAGCACCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAG
TATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGACCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAA
TCAGATATTGCTAAGACAGCATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTTATG
AACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGATTGACAGAGAATCTCATGAGGAACATCTGAGGATT
GTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGA
GTTAGTATCGATCCACAAAAAGTAGAAGCAATTGTCAATTGA
Protein sequenceShow/hide protein sequence
MLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQRKEVVFRKPGFAEVVFRGMRKAVSRSLISVLKAEKLLRKGCTAFLAHIVVVQREKLKP
EDVPVVKEFLDVFLDDLSGLPPDREIEFTIELLPGTAPISEAPYRMTPSELKELKMQLQELVDKGYIRPSVSSWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
YPLPRIDDLFDQLRGPALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSIDRESHEEHLRI
VLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSIDPQKVEAIVN