| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025848.1 pol protein [Cucumis melo var. makuwa] | 1.1e-83 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| KAA0031437.1 pol protein [Cucumis melo var. makuwa] | 1.1e-83 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| KAA0033825.1 pol protein [Cucumis melo var. makuwa] | 1.1e-83 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| TYK20443.1 pol protein [Cucumis melo var. makuwa] | 1.1e-83 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| TYK28422.1 pol protein [Cucumis melo var. makuwa] | 1.1e-83 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TEQ2 Reverse transcriptase | 5.5e-84 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| A0A5A7TSL0 Reverse transcriptase | 5.5e-84 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| A0A5A7U2S5 Pol protein | 5.5e-84 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| A0A5A7UBS1 Reverse transcriptase | 5.5e-84 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| A0A5D3CQB5 Reverse transcriptase | 5.5e-84 | 94.61 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNM+QRRWLELVK
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
DYDCEILYHPGKANVVADALSRKVAHS ALITKQ PLLRD ERAEIAVSVGEVT+QLAQLTVQPTLR
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQPTLR
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.7e-21 | 42.31 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PD + F + +DAS LG VL Q G ++Y S L HE NY T + EL A+V+A K +RHYL G +I +DH+ L + + K+ N K RW +
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRKVAHSTAL
++D +I Y GK N VADALSR T L
Subjt: DYDCEILYHPGKANVVADALSRKVAHSTAL
|
|
| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 5.8e-14 | 40 | Show/hide |
Query: PDGSGNFVIYSDASKKGLGCVLMQQGK----VVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLE
PD S F I +DASK+ G VL Q VAYAS E N T + ELAA+ +A+ +R Y+YG+ + TDH+ L Y F+ + K R
Subjt: PDGSGNFVIYSDASKKGLGCVLMQQGK----VVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLE
Query: LVKDYDCEILYHPGKANVVADALSR
+++Y+ + Y GK N VADALSR
Subjt: LVKDYDCEILYHPGKANVVADALSR
|
|
| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 2.9e-21 | 42.28 | Show/hide |
Query: PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMKQRRWLELVK
PD F + +DAS G+G VL Q+G+ + S LK EQNY T++ EL A+V+AL +++LYG + I IFTDH+ L + + N K +RW +
Subjt: PDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSRK
++ ++ Y PGK N VADALSR+
Subjt: DYDCEILYHPGKANVVADALSRK
|
|
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 5.4e-20 | 42.62 | Show/hide |
Query: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
+PD FV+ +DAS LG VL Q G +++ S L HE NY + EL A+V+A K +RHYL G + I +DH+ L++ KE K RW +
Subjt: MPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMKQRRWLELVK
Query: DYDCEILYHPGKANVVADALSR
+Y +I Y GK N VADALSR
Subjt: DYDCEILYHPGKANVVADALSR
|
|
| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.6e-19 | 40.83 | Show/hide |
Query: FVIYSDASKKGLGCVLMQ----QGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMKQRRWLELVKDY
F + +DAS +G VL Q + + +AY S L E+NY T + E+ A++++L R YLYG I+++TDH+ L + + N K +RW +++Y
Subjt: FVIYSDASKKGLGCVLMQ----QGKVVAYASHQLKCHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMKQRRWLELVKDY
Query: DCEILYHPGKANVVADALSR
+CE++Y PGK+NVVADALSR
Subjt: DCEILYHPGKANVVADALSR
|
|
