| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039975.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-98 | 78.79 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADED+EKTAFRTHEG+YEFLVMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEE+H +HMRK ++IEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKI+AISDWPQP NVKETRGFLGLTGYYRRFVR+YGTI APLTQLLKKGGF WTEEATLAF+ LKSAMMSLPVLALPDF+KQFEIE
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYG+GAVLVQD+RP+AYYS +++ +S
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| KAA0040664.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.2e-97 | 78.35 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADED+EKTAFRTHEG+YE LVMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEE+H +HM+K ++IEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKI+AISDWPQP NVKETRGFLGLTGYY+RFVRNYGTI APLTQLLKKGGF WTEEATLAF+ LKSAMMSL VLALPDFTKQFEIE
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYG+GAVLVQD+RP+AYYS ++I +S
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| KAA0059477.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 2.0e-96 | 79.22 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADEDVEKTAFRTHEG+YEF+VMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYS+NE++HV+HM K ERIEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKIRAISDWPQP NVKETRGFLGLTGYYR FV NY TI APLTQLLKKGGF WTEEAT +FD LKSAMMSLPVLAL DFTKQFEIET
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYGIGAVLVQDRRPIAYYS +++ ++
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| TYK06640.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-98 | 78.79 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADED+EKTAFRTHEG+YEFLVMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEE+H +HMRK ++IEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKI+AISDWPQP NVKETRGFLGLTGYYRRFVR+YGTI APLTQLLKKGGF WTEEATLAF+ LKSAMMSLPVLALPDF+KQFEIE
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYG+GAVLVQD+RP+AYYS +++ +S
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| TYK18846.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.6e-98 | 78.79 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADED+EKTAFRTHEG+YEFLVMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEE+H +HMRK ++IEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKI+AISDWPQP NVKE RGFLGLTGYYRRFVRNYGTI APLTQLLKKGGF WTEEATLAF+ LKSAMMSLPVLALPDF+KQFEIE
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYG+GAVLVQD+RP+AYYS +++ +S
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TB29 Ty3/gypsy retrotransposon protein | 2.5e-97 | 78.35 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADED+EKTAFRTHEG+YE LVMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEE+H +HM+K ++IEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKI+AISDWPQP NVKETRGFLGLTGYY+RFVRNYGTI APLTQLLKKGGF WTEEATLAF+ LKSAMMSL VLALPDFTKQFEIE
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYG+GAVLVQD+RP+AYYS ++I +S
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| A0A5A7TET8 Ty3/gypsy retrotransposon protein | 6.0e-99 | 78.79 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADED+EKTAFRTHEG+YEFLVMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEE+H +HMRK ++IEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKI+AISDWPQP NVKETRGFLGLTGYYRRFVR+YGTI APLTQLLKKGGF WTEEATLAF+ LKSAMMSLPVLALPDF+KQFEIE
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYG+GAVLVQD+RP+AYYS +++ +S
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| A0A5D3C073 Transposon Ty3-G Gag-Pol polyprotein | 9.6e-97 | 79.22 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADEDVEKTAFRTHEG+YEF+VMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYS+NE++HV+HM K ERIEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKIRAISDWPQP NVKETRGFLGLTGYYR FV NY TI APLTQLLKKGGF WTEEAT +FD LKSAMMSLPVLAL DFTKQFEIET
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYGIGAVLVQDRRPIAYYS +++ ++
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| A0A5D3D5P9 Ty3/gypsy retrotransposon protein | 7.8e-99 | 78.79 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADED+EKTAFRTHEG+YEFLVMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEE+H +HMRK ++IEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKI+AISDWPQP NVKE RGFLGLTGYYRRFVRNYGTI APLTQLLKKGGF WTEEATLAF+ LKSAMMSLPVLALPDF+KQFEIE
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYG+GAVLVQD+RP+AYYS +++ +S
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| A0A5D3DLL9 Ty3/gypsy retrotransposon protein | 6.0e-99 | 78.79 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
MADED+EKTAFRTHEG+YEFLVMPF LTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEE+H +HMRK ++IEYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMRK---------------------ERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
GHVISGEGVAVDPEKI+AISDWPQP NVKETRGFLGLTGYYRRFVR+YGTI APLTQLLKKGGF WTEEATLAF+ LKSAMMSLPVLALPDF+KQFEIE
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIET
Query: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
DASGYG+GAVLVQD+RP+AYYS +++ +S
Subjt: DASGYGIGAVLVQDRRPIAYYSSHVSIEGQS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.7e-45 | 43.75 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHV---------------------LHMRKERIEYL
M E V KTAF T G+YE+L MPF L NAPATFQ MN+I +P L K LV+ DDI+V+S + ++H+ K+ +L
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHV---------------------LHMRKERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWT--EEATLAFDLLKSAMMSLPVLALPDFTKQFEI
GHV++ +G+ +PEKI AI +P P KE + FLGLTGYYR+F+ N+ I P+T+ LKK I T E AF LK + P+L +PDFTK+F +
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWT--EEATLAFDLLKSAMMSLPVLALPDFTKQFEI
Query: ETDASGYGIGAVLVQDRRPIAYYS
TDAS +GAVL QD P++Y S
Subjt: ETDASGYGIGAVLVQDRRPIAYYS
|
|
| P0CT41 Transposon Tf2-12 polyprotein | 2.7e-32 | 35.09 | Show/hide |
Query: DVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMR---------------------KERIEYLGHVI
D K AFR G +E+LVMP+ ++ APA FQ +N I V+ + DDIL++S++E +HV H++ + +++++G+ I
Subjt: DVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMR---------------------KERIEYLGHVI
Query: SGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKG-GFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIETDAS
S +G E I + W QP N KE R FLG Y R+F+ + PL LLKK + WT T A + +K ++S PVL DF+K+ +ETDAS
Subjt: SGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKG-GFIWTEEATLAFDLLKSAMMSLPVLALPDFTKQFEIETDAS
Query: GYGIGAVLVQDR-----RPIAYYSSHVS
+GAVL Q P+ YYS+ +S
Subjt: GYGIGAVLVQDR-----RPIAYYSSHVS
|
|
| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 1.3e-37 | 37.87 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLH------------MR---------KERIEYL
+A+ D EKT+F + G YEF +PF L NA + FQ ++++ + + K V+ DD++++S NE DHV H MR KE +EYL
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLH------------MR---------KERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLK-KGGFI-----------WTEEATLAFDLLKSAMMSLPV-L
G ++S +G DPEK++AI ++P+P V + R FLGL YYR F++++ I P+T +LK + G + + E AF L++ + S V L
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLK-KGGFI-----------WTEEATLAFDLLKSAMMSLPV-L
Query: ALPDFTKQFEIETDASGYGIGAVLVQDRRPIAYYS
PDF K F++ TDAS GIGAVL Q+ RPI S
Subjt: ALPDFTKQFEIETDASGYGIGAVLVQDRRPIAYYS
|
|
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 4.8e-45 | 42.41 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMR---------------------KERIEYL
M +E + KTAF T G+YE+L MPF L NAPATFQ MNNI +P L K LV+ DDI+++S + +H+ ++ K+ +L
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDHVLHMR---------------------KERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTE--EATLAFDLLKSAMMSLPVLALPDFTKQFEI
GH+++ +G+ +P K++AI +P P KE R FLGLTGYYR+F+ NY I P+T LKK I T+ E AF+ LK+ ++ P+L LPDF K+F +
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLKKGGFIWTE--EATLAFDLLKSAMMSLPVLALPDFTKQFEI
Query: ETDASGYGIGAVLVQDRRPIAYYS
TDAS +GAVL Q+ PI++ S
Subjt: ETDASGYGIGAVLVQDRRPIAYYS
|
|
| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 7.2e-41 | 39.5 | Show/hide |
Query: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDH------VL---------------HMRKERIEYL
M + D+ KTAF T G YEFL +PF L NAPA FQ ++++I + + K V+ DDI+V+S + + H VL H ++E+L
Subjt: MADEDVEKTAFRTHEGYYEFLVMPFELTNAPATFQALMNNIFKPFLRKFVLVFFDDILVYSRNEEDH------VL---------------HMRKERIEYL
Query: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLK------------KGGFIWTEEATLAFDLLKSAMMSLPVLA
G++++ +G+ DP+K+RAIS+ P P +VKE + FLG+T YYR+F+++Y + PLT L + K E A +F+ LKS + S +LA
Subjt: GHVISGEGVAVDPEKIRAISDWPQPMNVKETRGFLGLTGYYRRFVRNYGTIVAPLTQLLK------------KGGFIWTEEATLAFDLLKSAMMSLPVLA
Query: LPDFTKQFEIETDASGYGIGAVLVQD----RRPIAYYS
P FTK F + TDAS + IGAVL QD RPIAY S
Subjt: LPDFTKQFEIETDASGYGIGAVLVQD----RRPIAYYS
|
|
