CuGenDBv2

Gene ID	Cmc12g0318551
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribonuclease H
Genome location	CMiso1.1chr12:3679923..3682405
RNA-Seq Expression	Cmc12g0318551
Synteny	Cmc12g0318551
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036934.1 uncharacterized protein E6C27_scaffold86G00070 [Cucumis melo var. makuwa]

0.0e+00

92.34

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Query:  MVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGR
        MVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGR
Subjt:  MVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGR

Query:  LNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKEHAIYYLSKKFTDYES
        LNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESS+DGVLGQHDLSGKKEHAIYYLSKKFTDYES
Subjt:  LNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKEHAIYYLSKKFTDYES

Query:  RYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFLDENIF
        RYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFLDENIF
Subjt:  RYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFLDENIF

Query:  LVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG---------------------------------------------------KEEWETRDAKLVP
        LVEKNARDHETWTMLFDGASNELGHGIGVVLIS EG                                                   KEEWE RDAKLVP
Subjt:  LVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG---------------------------------------------------KEEWETRDAKLVP

Query:  YSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRTIRRLAM
        YSQYVTKLSQ FEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRTIRRLAM
Subjt:  YSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRTIRRLAM

Query:  NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWPFS
        NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAAS LHILSAPWPFS
Subjt:  NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWPFS

Query:  LWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRPNMNGA
        LWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRP MNGA
Subjt:  LWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRPNMNGA

Query:  VEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQLNFVEEKRLAA
        VEAANKNIKRIIEKMTITYKDWHEML FALHGYRTSVRTSTGAT FSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQLNFVEEKR  A
Subjt:  VEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQLNFVEEKRLAA

KAA0037621.1 uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]

0.0e+00

89.52

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MPFGLKN GATYQR MVTLFHDMMHKEIEVYVDDMIAKSK DEDHTTTLQKLFDRLRKYQLKLNPSKC FGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE
        PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLL KNNPGKWNEDCEEAFNKIKQYLQSPPVL+PPAPGRPLILYLTVLESSM GVLGQHDLSGKK+
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE

Query:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
        H IYYLSKKFT+YESRYSMLERTCC LVWTAH LRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIK SAVADHLAAQPVA
Subjt:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA

Query:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------
        DYEPMRIDF D+NIFLVEKNARDHETWTMLFDGASNELGH IGVVLISPEG                                                 
Subjt:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------

Query:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY
          KEEWETR AKLVPYSQYVTKLSQ FEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY
Subjt:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY

Query:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV
        EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIM DI+EGIC THANGHMMARQILRS YYWTTMESDCIKY RECKKCQIYMDKIHV
Subjt:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV

Query:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI
        AAS LHILSAPWPFSLWGMDVIGPIDPKASNGHRF LV+IDYFTKWIE AS+CNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI
Subjt:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI

Query:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
        NHRNSTPYRP MNGAVEAANKNIKRIIEKMTITYKDWHEML FALHGYRTSVRTSTGAT FSLVYGME VLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
Subjt:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ

Query:  LNFVEEKRLAALNHGQLYQKK
        LNFVEEKRLAALNH QLYQ++
Subjt:  LNFVEEKRLAALNHGQLYQKK

XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]

0.0e+00

86.85

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSK +EDHTT LQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKV+AIM+M
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE
        PSP+TEKE+R FLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLE SM GVLGQHDLSGKKE
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE

Query:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
        HAIYYLSKKFTDYES+YSMLERTCCALVWTAH LRQYMLYHTT LISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA+ADHLAAQPVA
Subjt:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA

Query:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------
        DYEPM +DF DENIFLVE +A DHETW MLFDGASNELGHGIGVVLISP+G                                                 
Subjt:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------

Query:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY
          KEEWETRDAKL PYSQY+ KLSQ FEKISFDHV REDNRMADALATLAVMF+LNLE+EL+PIQITKRD PAYCMN+ NDNKPWYFDIKQYIKCREYPY
Subjt:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY

Query:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV
         AS+N KRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVD EEAKQIM +I+EGICGTHANGH MARQILRSGYYWTTMESDCIKYARECKKCQIYMD+IH 
Subjt:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV

Query:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI
        AAS LH+LSAPWPFSLWG+DVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCE+FKI
Subjt:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI

Query:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
        NHRNSTPYRP MNGAVEAANKNIKRIIEKMT TYKDWHE+L FALHGYRTSVRTSTGAT FSLVYGME VLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
Subjt:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ

Query:  LNFVEEKRLAALNHGQLYQKK
        LNF+EEKRL AL+HGQLYQK+
Subjt:  LNFVEEKRLAALNHGQLYQKK

XP_031741698.1 uncharacterized protein LOC116403895 [Cucumis sativus]

0.0e+00

86.97

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSK +EDHTT LQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKV+AIM+M
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE
        PSP+TEKE+R FLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLE SM GVLGQHDLSGKKE
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE

Query:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
        HAIYYLSKKFTDYES+YSMLERTCCALVWTAH LRQYMLYHTT LISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA+ADHLAAQPVA
Subjt:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA

Query:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------
        DYEPM +DF DENIFLVE +A DHETW MLFDGASNELGHGIGVVLISP+G                                                 
Subjt:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------

Query:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY
          KEEWETRDAKLVPYSQY+ KLSQ FEKISFDHV REDNRMADALATLAVMF+LNLE+EL+PIQITKRD  AYCMN+ NDNKPWYFDIKQYIKCREYPY
Subjt:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY

Query:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV
         AS+NDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVD EEAKQIM +I+EGICGTHANGH MARQILRSGYYWTTMESDCIKYARECKKCQIYMD+IH 
Subjt:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV

Query:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI
        AAS LH+LSAPWPFSLWG+DVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCE+FKI
Subjt:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI

Query:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
        NHRNSTPYRP MNGAVEAANKNIKRIIEKMT TYKDWHE+L FALHGYRTSVRTSTGAT FSLVYGME VLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
Subjt:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ

Query:  LNFVEEKRLAALNHGQLYQKK
        LNF+EEKRL AL+HGQLYQK+
Subjt:  LNFVEEKRLAALNHGQLYQKK

XP_031742240.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116404130 [Cucumis sativus]

0.0e+00

86.85

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MPFGLKNAGATYQRA+VTLFHDMMHKEIEVYVDDMIAKSK +EDHTT LQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKV+AIM+M
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE
        PSP+TEKE+R FLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLE SM GVLGQHDLSGKKE
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE

Query:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
        HAIYYLSKKFTDYES+YSMLERTCCALVWTAH LRQYMLYHTT LISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSA+ADHLAAQPVA
Subjt:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA

Query:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------
        DYEPM +DF DENIFLVE +A DHETW MLFDGASNELGHGIGVVLISP+G                                                 
Subjt:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------

Query:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY
          KEEWETRDAKLVPYSQY+ KLSQ FEKISFDHV REDNRMADALATLAVMF+LNLE+EL+PIQITKRD PAYCMN+ NDNKPWYFDIKQYIKCREYPY
Subjt:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY

Query:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV
         AS+NDKRTI+RLAMNFFLSGEVLYKRNHDMVLLRCVD EEAKQIM +I+EGICGTHANGH MARQILRSGYYWTTMESDCIKYARECKKCQIYMD+IH 
Subjt:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV

Query:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI
        AAS LH+LSAPWPFSLWG+DVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCE+FKI
Subjt:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI

Query:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
        NHRNSTPYRP MNGAVEAANKNIKRIIEKMT TYKDWHE+L FALHGYRTSVRTSTGAT FSLVYGME VLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
Subjt:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ

Query:  LNFVEEKRLAALNHGQLYQKK
        LNF+EEKRL AL+HGQLYQK+
Subjt:  LNFVEEKRLAALNHGQLYQKK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T0A1 Ribonuclease H

0.0e+00

92.34

Show/hide

Query:  MVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGR
        MVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGR
Subjt:  MVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGR

Query:  LNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKEHAIYYLSKKFTDYES
        LNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESS+DGVLGQHDLSGKKEHAIYYLSKKFTDYES
Subjt:  LNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKEHAIYYLSKKFTDYES

Query:  RYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFLDENIF
        RYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFLDENIF
Subjt:  RYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFLDENIF

Query:  LVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG---------------------------------------------------KEEWETRDAKLVP
        LVEKNARDHETWTMLFDGASNELGHGIGVVLIS EG                                                   KEEWE RDAKLVP
Subjt:  LVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG---------------------------------------------------KEEWETRDAKLVP

Query:  YSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRTIRRLAM
        YSQYVTKLSQ FEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRTIRRLAM
Subjt:  YSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPYEASENDKRTIRRLAM

Query:  NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWPFS
        NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAAS LHILSAPWPFS
Subjt:  NFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWPFS

Query:  LWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRPNMNGA
        LWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRP MNGA
Subjt:  LWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRPNMNGA

Query:  VEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQLNFVEEKRLAA
        VEAANKNIKRIIEKMTITYKDWHEML FALHGYRTSVRTSTGAT FSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQLNFVEEKR  A
Subjt:  VEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQLNFVEEKRLAA

A0A5A7T7R4 Ribonuclease H

0.0e+00

89.52

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MPFGLKN GATYQR MVTLFHDMMHKEIEVYVDDMIAKSK DEDHTTTLQKLFDRLRKYQLKLNPSKC FGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE
        PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLL KNNPGKWNEDCEEAFNKIKQYLQSPPVL+PPAPGRPLILYLTVLESSM GVLGQHDLSGKK+
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE

Query:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
        H IYYLSKKFT+YESRYSMLERTCC LVWTAH LRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIK SAVADHLAAQPVA
Subjt:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA

Query:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------
        DYEPMRIDF D+NIFLVEKNARDHETWTMLFDGASNELGH IGVVLISPEG                                                 
Subjt:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------

Query:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY
          KEEWETR AKLVPYSQYVTKLSQ FEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY
Subjt:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY

Query:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV
        EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIM DI+EGIC THANGHMMARQILRS YYWTTMESDCIKY RECKKCQIYMDKIHV
Subjt:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV

Query:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI
        AAS LHILSAPWPFSLWGMDVIGPIDPKASNGHRF LV+IDYFTKWIE AS+CNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI
Subjt:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI

Query:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
        NHRNSTPYRP MNGAVEAANKNIKRIIEKMTITYKDWHEML FALHGYRTSVRTSTGAT FSLVYGME VLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ
Subjt:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQ

Query:  LNFVEEKRLAALNHGQLYQKK
        LNFVEEKRLAALNH QLYQ++
Subjt:  LNFVEEKRLAALNHGQLYQKK

A0A5D3DMD2 Ribonuclease H

0.0e+00

89.9

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGAT GKLLGFIVSEEGIKVDPDKVRAIMEM
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE
        PSPKTEKEIRGFLGRLNYISRFIS+LTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSM GVLGQHDLSGKKE
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE

Query:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
        HAIYYLSKKFTDYESRYSMLERTCCALVWTAH LRQYMLYHTTCLISKMD IKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
Subjt:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA

Query:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------
        DYEPMRIDF D+NIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG                                                 
Subjt:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEG-------------------------------------------------

Query:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY
          KEEWETRDAKLVPYSQYVTKLSQ FEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY
Subjt:  --KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYPY

Query:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV
        EASENDKR IRRL MNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDI+EGICGTHANGHMMARQILRSGYYWTTMESDCIKYAR+CKKCQIYMDKIHV
Subjt:  EASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHV

Query:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI
        AAS LHI SA WPFSLWGMDVIG IDPKASNGH FILVAIDYFTKWIE ASYCNVTRGVVLKFIKKELICRYGLPEGIIT+NAKNLNN+MMDEL EQFKI
Subjt:  AASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKI

Query:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAE
        NHRN TPYRP MN AVEAANKNIKRIIEKMTITYKDWHEML FALHGYRTSVRTST AT FS VYGMEVVLPLEVEIPSLRVLMEAKLDE E
Subjt:  NHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAE

A0A6J1D099 Ribonuclease H

0.0e+00

70.91

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        M FGLKNAGATYQRAMVTLFHD+MHKEIEVYVDDMIAKSK  E+HTT L+KLFDRLRK++LKLN +KC FGAT+GKLLGF+VS+EGIKVDPDKV+AI+EM
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE
        P P+T+KE+RGFLGRLNYI+RFISHLT TCEPIFKLLRKNN G  +EDC+ AF+K+KQYLQ PPVL+PP PGR LILYLTV E+SM  VLGQHD SG+KE
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE

Query:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
         AIYYLSKKFTD E+RYS +E+TCCAL W A  LRQYMLY+TT LISKMDPIKYIFEKPSLSG IA+WQVLLSEYDIVYVT+KAIKGSA+AD+LA QP+ 
Subjt:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA

Query:  DYEPMRIDFLDENIFLV--EKNARDHETWTMLFDGASNELGHGIGVVLISPEG-----------------------------------------------
        DY P++ DF DE I  +   + + D +TWTM+FDGASNELGHGIG +LISP+G                                               
Subjt:  DYEPMRIDFLDENIFLV--EKNARDHETWTMLFDGASNELGHGIGVVLISPEG-----------------------------------------------

Query:  ----KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGN--DNKPWYFDIKQYIKCR
            + EWETRD KL+PY Q++T+LSQ+F++ISFD++PRE+N++ADALATLAVMF+L L  ++ PI++ +RDVPA CM++    D KPW+ DIKQYIK +
Subjt:  ----KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGN--DNKPWYFDIKQYIKCR

Query:  EYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMD
        EYP  ASENDKRT+R+LA+ FFL+GE+LYKRNHDMVLLRCV+  +A +IM +I+EG+CGTHANGHMMARQILR+GYYW T+E+DCIKYAR+C KCQIY D
Subjt:  EYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMD

Query:  KIHVAASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCE
        K H  AS LH L+APWPFS+WGMDVIGPI+PKASNGH+FILVAIDYFTKW+EAASY +VT+GVV+KFIKKE+ICRYGLP+ II+DNA+NLNNK+M EL E
Subjt:  KIHVAASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCE

Query:  QFKINHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRG
        QFKI H NSTPYRP MNGAVEAANKNIKRI+EKMT+TY+DWHEML FALHGYRTSVRTSTGAT FSLVYGMEVVLP+EVEIPSLRV+MEAKL EAEW++ 
Subjt:  QFKINHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRG

Query:  RYEQLNFVEEKRLAALNHGQLYQKK
        RYEQLNFVEEKRL AL   QLYQ++
Subjt:  RYEQLNFVEEKRLAALNHGQLYQKK

A0A6J1DZ90 Ribonuclease H

0.0e+00

70.91

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MPFGLKN GATYQRAMVTLFHD+MHKEIEVYVDDMIAKSK  E+HTT L+KLFDRLRK++LKLNP+KC FGAT+GKLLGF+VS+EGIKVDPDKV+AI+EM
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE
        P P+T+KE+RGFLGRLNYI+RFISHLT TCEPIFKLLRKNN G W+EDC+ AFNKIKQYLQ PP+L+PP PGRPLILYLTV E+SM  VLGQHD SG+KE
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE

Query:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
         AIYYLSKKFTD E+RYS +E+TCCAL W A  LRQYMLY+TT LISKMDPIKYIFEKPSLSGRIA+WQVLLSEYDIVYVT+KAIKGSA+AD+LA QP+ 
Subjt:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA

Query:  DYEPMRIDFLDENIFLV--EKNARDHETWTMLFDGASNELGHGIGVVLISPEG-----------------------------------------------
        DY P++ DF DE I  +   + + D +TWTM+FDGASNELGH IG +LISP+G                                               
Subjt:  DYEPMRIDFLDENIFLV--EKNARDHETWTMLFDGASNELGHGIGVVLISPEG-----------------------------------------------

Query:  ----KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGN--DNKPWYFDIKQYIKCR
            + EWETRD KL+PY Q +T+LSQ+F++ISFD++PRE+N++ADALATLAVMF+L L  ++ PI++ +RDVPA CM++    D  PW+ DIKQYIK +
Subjt:  ----KEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGN--DNKPWYFDIKQYIKCR

Query:  EYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMD
        EY   ASENDKRT+R+LAM FFL+GE+LYKRNHDMVLLRCV+  +A +IM +++EG+CGTHANGHMMARQILR+GYYW T+E+DCIKYAR+C KCQIY D
Subjt:  EYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMD

Query:  KIHVAASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCE
        K H   S LH L+APWPFS+WGMDVIGPI+PKAS+GHRFILVAIDYFTKW+EAASY +VT+GVV+KFIKK++ICRYGLPE II+DNA+NLNNK+M ELCE
Subjt:  KIHVAASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCE

Query:  QFKINHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRG
        QFKI H NSTPYRP MNGAVEAANKNIKRI+EKMT+TY DWHEML FALHGYRTSVRTSTG T FSLVYGMEVVL +EVEIPSLRV+MEAKL  AEW++ 
Subjt:  QFKINHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRG

Query:  RYEQLNFVEEKRLAALNHGQLYQKK
        RYEQLNFVEEKRL AL  GQLYQ++
Subjt:  RYEQLNFVEEKRLAALNHGQLYQKK

SwissProt top hits

e value

%identity

Alignment

P04323 Retrovirus-related Pol polyprotein from transposon 17.6

2.6e-40

32.55

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MPFGLKNA AT+QR M  +   +++K   VY+DD+I  S + ++H  +L  +F++L K  LKL   KC F       LG +++ +GIK +P+K+ AI + 
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKN-NPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKK
        P P   KEI+ FLG   Y  +FI +     +P+ K L+KN      N + + AF K+K  +   P+L  P   +   L     + ++  VL Q       
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKN-NPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKK

Query:  EHAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKG--SAVADHLA
         H + Y+S+   ++E  YS +E+   A+VW     R Y+L     + S   P+ +++     + ++ +W+V LSE+D      K IKG  + VAD L+
Subjt:  EHAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKG--SAVADHLA

P0CT41 Transposon Tf2-12 polyprotein

2.6e-32

27.19

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MP+G+  A A +Q  + T+  +     +  Y+DD++  SK++ +H   ++ +  +L+   L +N +KC F  +  K +G+ +SE+G     + +  +++ 
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQ-HDLSGKK
          PK  KE+R FLG +NY+ +FI   +    P+  LL+K+   KW     +A   IKQ L SPPVL      + ++L     + ++  VL Q HD    K
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQ-HDLSGKK

Query:  EHAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRI-----------AKWQVLLSEYDIVYVTKKAIKGS
         + + Y S K +  +  YS+ ++   A++ +  H R Y       L S ++P K + +  +L GRI           A+WQ+ L +++   +  +    +
Subjt:  EHAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRI-----------AKWQVLLSEYDIVYVTKKAIKGS

Query:  AVADHLAAQPVADYEPMRIDFLDENIFLVEK
         +AD L ++ V + EP+  D  D +I  V +
Subjt:  AVADHLAAQPVADYEPMRIDFLDENIFLVEK

P10394 Retrovirus-related Pol polyprotein from transposon 412

2.1e-50

23.98

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        +PFGLK A  ++QR M   F  +   +  +Y+DD+I    +++     L ++F + R+Y LKL+P KC+F       LG   +++GI  D  K   I   
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE
        P P      R F+   NY  RFI +       I +L +KN P +W ++C++AF  +K  L +P +L  P   +   +     + +   VL Q+      +
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKE

Query:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA
          + Y S+ FT  ES  S  E+   A+ W   H R Y+      + +   P+ Y+F   + S ++ + ++ L EY+      K  K + VAD L+   + 
Subjt:  HAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVA

Query:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAV
        + +      +  NI  V    +  +                      S  GKE+ +     L   ++ +      +E I+ D V +              
Subjt:  DYEPMRIDFLDENIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAV

Query:  MFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYP---YEASEND----KRTIRRLAMNFFLSGEVLYKRNHDMVLLRCV----DEE
        +  L L   +   +  K+ +  Y  +VG+       D+ Q+++  E     Y+ S+      K+    ++++ F +      +N  + LL  V    +E+
Subjt:  MFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKCREYP---YEASEND----KRTIRRLAMNFFLSGEVLYKRNHDMVLLRCV----DEE

Query:  EAKQIMTDIYEG-ICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVA
        E + I++ +++  I G H        ++ R  YYW  M     +Y R+C+KCQ      H         +    F    +D IGP+ PK+ NG+ + +  
Subjt:  EAKQIMTDIYEG-ICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVA

Query:  IDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYK-DWH
        I   TK++ A    N +   V K I +  I +YG  +  ITD      N ++ +LC+  KI +  ST +     G VE +++ +   I     T K DW 
Subjt:  IDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRPNMNGAVEAANKNIKRIIEKMTITYK-DWH

Query:  EMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLP
          L + ++ + T+         + LV+G    LP
Subjt:  EMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLP

P20825 Retrovirus-related Pol polyprotein from transposon 297

2.4e-38

32.43

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        MPFGL+NA AT+QR M  +   +++K   VY+DD+I  S +  +H  ++Q +F +L    LKL   KC F       LG IV+ +GIK +P KV+AI+  
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNE-DCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKK
        P P  +KEIR FLG   Y  +FI +     +P+   L+K       + +  EAF K+K  +   P+L  P   +  +L       ++  VL Q+      
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNE-DCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKK

Query:  EHAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLA
         H I ++S+   D+E  YS +E+   A+VW     R Y+L     + S   P++++        ++ +W+V LSEY       K  K ++VAD L+
Subjt:  EHAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLA

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus

9.6e-35

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Query:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM
        +PFGLKNA A +QR +  +  + + K   VY+DD+I  S+  + H   L+ +   L K  L++N  K  F  T  + LG+IV+ +GIK DP KVRAI EM
Subjt:  MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEM

Query:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLR-----------KNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGV
        P P + KE++ FLG  +Y  +FI       +P+  L R              P   +E   ++FN +K  L S  +L  P   +P  L       ++  V
Subjt:  PSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLR-----------KNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGV

Query:  LGQHDLSGKKEHAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLI-SKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGS
        L Q D    ++  I Y+S+     E  Y+ +E+   A++W+  +LR Y+    T  + +   P+ +     + + ++ +W+  + EY+   + K   K +
Subjt:  LGQHDLSGKKEHAIYYLSKKFTDYESRYSMLERTCCALVWTAHHLRQYMLYHTTCLI-SKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGS

Query:  AVADHLAAQP
         VAD L+  P
Subjt:  AVADHLAAQP

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.9e-14

36.36

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Query:  KYQLKLNPSKCTFGATSGKLLG--FIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNK
        ++Q   N  KC FG      LG   I+S EG+  DP K+ A++  P PK   E+RGFLG   Y  RF+ +      P+ +LL+KN+  KW E    AF  
Subjt:  KYQLKLNPSKCTFGATSGKLLG--FIVSEEGIKVDPDKVRAIMEMPSPKTEKEIRGFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNK

Query:  IKQYLQSPPVLIPPAPGRPLI
        +K  + + PVL  P    P +
Subjt:  IKQYLQSPPVLIPPAPGRPLI

Sequences

Show/hide sequences

CDS sequence

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ATGCCTTTTGGTTTGAAAAATGCTGGAGCAACGTATCAGCGAGCAATGGTTACACTTTTTCATGATATGATGCATAAAGAAATAGAGGTGTATGTTGATGATATGATTGC
AAAATCCAAGACAGATGAAGATCATACAACCACACTCCAAAAATTATTTGATCGGTTGAGAAAATATCAATTGAAATTAAATCCATCCAAATGTACATTTGGGGCAACTT
CGGGAAAGCTACTGGGATTCATCGTCAGTGAAGAAGGGATCAAAGTGGACCCAGATAAAGTAAGGGCTATCATGGAAATGCCATCCCCTAAAACAGAAAAAGAAATTCGA
GGTTTTCTGGGAAGATTGAACTACATATCCAGATTTATCTCACATTTAACACCAACATGCGAACCAATCTTCAAGCTCTTACGTAAAAACAACCCAGGAAAATGGAATGA
GGATTGTGAAGAAGCTTTCAACAAAATTAAGCAGTATTTGCAGAGCCCACCAGTACTGATACCTCCAGCTCCAGGGCGACCGTTAATCTTGTATTTAACAGTATTAGAAA
GTTCCATGGATGGTGTTCTAGGACAACATGATTTATCAGGGAAGAAGGAGCATGCCATTTATTATTTGAGCAAAAAGTTTACCGATTATGAATCTAGATACTCAATGTTA
GAGCGAACTTGTTGTGCTTTGGTATGGACCGCTCATCATTTGAGGCAATATATGTTATACCACACGACATGTCTTATTTCAAAAATGGATCCAATAAAATACATTTTTGA
GAAACCGTCATTATCTGGAAGGATTGCAAAATGGCAAGTTTTATTGTCAGAGTATGATATTGTTTATGTCACTAAAAAAGCAATAAAGGGAAGCGCAGTTGCTGATCATT
TAGCTGCTCAACCAGTAGCAGATTACGAACCTATGAGAATTGATTTCCTGGATGAAAACATATTTCTAGTTGAAAAGAATGCTAGAGATCATGAGACATGGACTATGCTT
TTCGATGGTGCCTCAAATGAGTTGGGACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACAGCCA
ATACGTTACAAAATTGTCTCAAAAGTTTGAGAAGATTTCATTTGACCATGTTCCTAGGGAAGACAATCGAATGGCGGATGCATTAGCCACTCTGGCAGTGATGTTTGATC
TTAATCTTGAATTTGAACTTCATCCAATCCAAATTACAAAGCGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAA
TACATAAAGTGTAGAGAATATCCATATGAAGCTTCAGAAAATGACAAACGCACAATAAGGAGGTTGGCCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAA
CCACGATATGGTGCTCCTTCGGTGTGTTGATGAAGAGGAAGCAAAACAAATTATGACAGACATTTATGAAGGAATATGTGGAACACATGCTAATGGACATATGATGGCTA
GACAAATACTTAGATCTGGTTATTATTGGACAACGATGGAATCAGATTGCATAAAATATGCAAGGGAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCA
GCATCTTCATTGCATATCTTGTCAGCACCATGGCCCTTTTCTTTATGGGGAATGGATGTTATTGGACCCATTGATCCTAAAGCCTCAAATGGCCATCGTTTTATTCTTGT
GGCCATTGATTACTTCACTAAATGGATAGAGGCTGCATCTTATTGCAATGTTACAAGGGGAGTAGTGCTCAAGTTTATCAAGAAAGAGCTTATATGTCGTTATGGTCTCC
CAGAAGGTATTATTACGGATAATGCTAAGAACCTTAATAACAAAATGATGGACGAACTTTGTGAGCAGTTCAAGATCAATCACCGAAATTCGACTCCATATCGCCCAAAT
ATGAATGGGGCAGTTGAGGCAGCTAACAAAAATATTAAAAGAATCATTGAGAAAATGACAATAACATACAAAGATTGGCATGAAATGCTACTGTTTGCGTTGCATGGATA
TCGCACGTCAGTTCGTACTTCAACTGGGGCAACACTATTTTCTTTAGTTTATGGTATGGAAGTTGTTTTACCTTTAGAAGTTGAGATACCTTCATTGAGAGTTCTCATGG
AAGCTAAGTTAGATGAAGCTGAATGGATACGAGGTCGTTATGAGCAGTTGAATTTCGTTGAAGAAAAAAGGTTGGCAGCATTAAATCATGGGCAACTTTACCAAAAGAAG
ACTAATGCGAGCATACAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPFGLKNAGATYQRAMVTLFHDMMHKEIEVYVDDMIAKSKTDEDHTTTLQKLFDRLRKYQLKLNPSKCTFGATSGKLLGFIVSEEGIKVDPDKVRAIMEMPSPKTEKEIR
GFLGRLNYISRFISHLTPTCEPIFKLLRKNNPGKWNEDCEEAFNKIKQYLQSPPVLIPPAPGRPLILYLTVLESSMDGVLGQHDLSGKKEHAIYYLSKKFTDYESRYSML
ERTCCALVWTAHHLRQYMLYHTTCLISKMDPIKYIFEKPSLSGRIAKWQVLLSEYDIVYVTKKAIKGSAVADHLAAQPVADYEPMRIDFLDENIFLVEKNARDHETWTML
FDGASNELGHGIGVVLISPEGKEEWETRDAKLVPYSQYVTKLSQKFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQ
YIKCREYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICGTHANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVA
ASSLHILSAPWPFSLWGMDVIGPIDPKASNGHRFILVAIDYFTKWIEAASYCNVTRGVVLKFIKKELICRYGLPEGIITDNAKNLNNKMMDELCEQFKINHRNSTPYRPN
MNGAVEAANKNIKRIIEKMTITYKDWHEMLLFALHGYRTSVRTSTGATLFSLVYGMEVVLPLEVEIPSLRVLMEAKLDEAEWIRGRYEQLNFVEEKRLAALNHGQLYQKK
TNASIQ

Cmc12g0318551 (gene) of Melon (Charmono) v1.1 genome