; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0318641 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0318641
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSWIM-type domain-containing protein
Genome locationCMiso1.1chr12:3784722..3785556
RNA-Seq ExpressionCmc12g0318641
SyntenyCmc12g0318641
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036930.1 uncharacterized protein E6C27_scaffold86G00020 [Cucumis melo var. makuwa]2.4e-114100Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF

Query:  WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI
        WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI
Subjt:  WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI

Query:  RTSRFEPI
        RTSRFEPI
Subjt:  RTSRFEPI

KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]3.0e-12594.17Show/hide
Query:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF
        MESIYPSIRGYL+KVGFERWS AYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLL+AIREFLQRWFYERRKAAS LKSVLSSWAEGLIRKLVDESRSF
Subjt:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF

Query:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR
        IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYY TVL ATYGGLVR IGNHTDWSVVEVNDNILPP+FRR
Subjt:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR

Query:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI
        P GRPRKR+IPSIG+VSKSSKCSRCKR GHNIRT  FEPI
Subjt:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]3.2e-12795.83Show/hide
Query:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF
        MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLL+AIREFLQRWFYERRKAAS LKSVLSSWAEGLIRKLVDESRSF
Subjt:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF

Query:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR
        IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEI CAHALIVIRSLNLNPYAFVSQYYY TVLSATYGGLVRPIGNHTDWSVV VNDNILPPVFRR
Subjt:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR

Query:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI
        PAGRPRKR+IPSIG+VSKSSKCSRCKR  HNIRT RFEPI
Subjt:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI

TYK03234.1 uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]2.7e-11096.63Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLL+AIREFLQRWFYERRKAAS LKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF

Query:  WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI
        WDLEEI CAHALIVIRSLNLNPYAFVSQYYY TVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKR+IPSIG+VSKSSKCSRCKRDGHNI
Subjt:  WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI

Query:  RTSRFEPI
        RT RFEPI
Subjt:  RTSRFEPI

XP_016900337.1 PREDICTED: uncharacterized protein LOC107990862 [Cucumis melo]3.3e-12494.17Show/hide
Query:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF
        MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLL+AIREFLQRWFYERRKAAS LKSVLSSW+EGLIRKLVDESRSF
Subjt:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF

Query:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR
        IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEI  AHALIVI SLNLNPYAFVSQYYY TVLSATYGGLVRPIGNHTDWSVVE+NDNILPPVFRR
Subjt:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR

Query:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI
        PA RPRKR+IPSIG+VSKSSKCSRCKR GHNIRT  FEPI
Subjt:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI

TrEMBL top hitse value%identityAlignment
A0A1S4DWH2 uncharacterized protein LOC1079908621.6e-12494.17Show/hide
Query:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF
        MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLL+AIREFLQRWFYERRKAAS LKSVLSSW+EGLIRKLVDESRSF
Subjt:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF

Query:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR
        IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEI  AHALIVI SLNLNPYAFVSQYYY TVLSATYGGLVRPIGNHTDWSVVE+NDNILPPVFRR
Subjt:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR

Query:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI
        PA RPRKR+IPSIG+VSKSSKCSRCKR GHNIRT  FEPI
Subjt:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI

A0A5A7V6N4 SWIM-type domain-containing protein1.4e-12594.17Show/hide
Query:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF
        MESIYPSIRGYL+KVGFERWS AYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLL+AIREFLQRWFYERRKAAS LKSVLSSWAEGLIRKLVDESRSF
Subjt:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF

Query:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR
        IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYY TVL ATYGGLVR IGNHTDWSVVEVNDNILPP+FRR
Subjt:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR

Query:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI
        P GRPRKR+IPSIG+VSKSSKCSRCKR GHNIRT  FEPI
Subjt:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI

A0A5D3BD68 SWIM-type domain-containing protein1.5e-12795.83Show/hide
Query:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF
        MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLL+AIREFLQRWFYERRKAAS LKSVLSSWAEGLIRKLVDESRSF
Subjt:  MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSF

Query:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR
        IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEI CAHALIVIRSLNLNPYAFVSQYYY TVLSATYGGLVRPIGNHTDWSVV VNDNILPPVFRR
Subjt:  IVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRR

Query:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI
        PAGRPRKR+IPSIG+VSKSSKCSRCKR  HNIRT RFEPI
Subjt:  PAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNIRTSRFEPI

A0A5D3BEQ2 SWIM-type domain-containing protein1.1e-114100Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF

Query:  WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI
        WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI
Subjt:  WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI

Query:  RTSRFEPI
        RTSRFEPI
Subjt:  RTSRFEPI

A0A5D3BVP4 SWIM-type domain-containing protein1.3e-11096.63Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLL+AIREFLQRWFYERRKAAS LKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLF

Query:  WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI
        WDLEEI CAHALIVIRSLNLNPYAFVSQYYY TVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKR+IPSIG+VSKSSKCSRCKRDGHNI
Subjt:  WDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSSKCSRCKRDGHNI

Query:  RTSRFEPI
        RT RFEPI
Subjt:  RTSRFEPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGATATACCCATCTATTAGAGGATATCTTATGAAAGTTGGTTTTGAGAGATGGTCACGCGCATACTCTAGAAAAAGAAGATATCAAATAATGACAACGAATAT
TTGTGAAAGCTTGAATTCTAAGTTGAAGATTGATAGAGACTTACCGGTTGCATCCTTGCTTAAGGCCATTAGAGAGTTTCTTCAACGGTGGTTTTATGAGAGAAGAAAAG
CAGCCTCATATTTAAAAAGTGTTTTGAGTTCTTGGGCTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGCTTCATTGTGAATCCTGTGAGTGAAGTTGAATTT
CAAGTAGTTGATGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAGTTGCCTTTTTTGGGATCTAGAAGAAATTTCATGTGCTCATGCTCTTATTGTCAT
TCGTAGTCTTAATTTGAATCCTTATGCATTCGTTTCACAGTATTACTATACTACTGTATTGTCTGCAACTTATGGTGGTTTAGTTCGCCCGATTGGTAACCATACTGATT
GGAGTGTTGTGGAGGTGAACGATAATATATTGCCTCCAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAAGATTCCTTCTATTGGTAAAGTTTCAAAGAGCTCA
AAATGTAGTCGTTGTAAGAGAGACGGTCATAATATTAGAACTTCTAGATTTGAACCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCGATATACCCATCTATTAGAGGATATCTTATGAAAGTTGGTTTTGAGAGATGGTCACGCGCATACTCTAGAAAAAGAAGATATCAAATAATGACAACGAATAT
TTGTGAAAGCTTGAATTCTAAGTTGAAGATTGATAGAGACTTACCGGTTGCATCCTTGCTTAAGGCCATTAGAGAGTTTCTTCAACGGTGGTTTTATGAGAGAAGAAAAG
CAGCCTCATATTTAAAAAGTGTTTTGAGTTCTTGGGCTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGCTTCATTGTGAATCCTGTGAGTGAAGTTGAATTT
CAAGTAGTTGATGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAGTTGCCTTTTTTGGGATCTAGAAGAAATTTCATGTGCTCATGCTCTTATTGTCAT
TCGTAGTCTTAATTTGAATCCTTATGCATTCGTTTCACAGTATTACTATACTACTGTATTGTCTGCAACTTATGGTGGTTTAGTTCGCCCGATTGGTAACCATACTGATT
GGAGTGTTGTGGAGGTGAACGATAATATATTGCCTCCAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAAGATTCCTTCTATTGGTAAAGTTTCAAAGAGCTCA
AAATGTAGTCGTTGTAAGAGAGACGGTCATAATATTAGAACTTCTAGATTTGAACCTATTTGA
Protein sequenceShow/hide protein sequence
MESIYPSIRGYLMKVGFERWSRAYSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLKAIREFLQRWFYERRKAASYLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEF
QVVDGGKNFLVKLNCNSCSCLFWDLEEISCAHALIVIRSLNLNPYAFVSQYYYTTVLSATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRKIPSIGKVSKSS
KCSRCKRDGHNIRTSRFEPI