| GenBank top hits | e value | %identity | Alignment |
|---|
| KAD6453934.1 hypothetical protein E3N88_08640 [Mikania micrantha] | 1.2e-78 | 68.75 | Show/hide |
Query: MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
+WKEAIKSE+DS++ NHTW+L DLP G KPI KWIFK+K +P+G++D+YKARLV+ G+TQK G+DYFDTYS +TKITTIR LI +AAI+ LIHQMDVK
Subjt: MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
Query: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
TAFLNGDL+EEIYM QPEGF +SG E+KVCKLRKSLYGLKQ PK+WYE F+ TL +G+ +N+SD+CVYSK +LICLYVDDMLIFG +M I T
Subjt: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
Query: KLFLSSHF
K FLSS F
Subjt: KLFLSSHF
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| KAG7551885.1 Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | 5.4e-76 | 65.22 | Show/hide |
Query: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
WKEA+ +E DS++ NHTW++VDLP G K IRCKWI K+K K +GSID++KARLV G+ QK+G+DYFDTY+ +TKI +IR L+ +A+ H ++HQMDVKT
Subjt: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
Query: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
AFLNGDL EEIYM QPEGF I GQENKVCKL KSLYGLKQ PKQW+E F+ TL+ NGF N DTCV+SKV ++ICLYVDDMLI GT++E++ DTK
Subjt: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
Query: LFLSSHF
+FLSS F
Subjt: LFLSSHF
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| KAG7571733.1 Integrase catalytic core [Arabidopsis suecica] | 5.4e-76 | 65.22 | Show/hide |
Query: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
WKEA+ +E DS++ NHTW++VDLP G K IRCKWI K+K K +GSID++KARLV G+ QK+G+DYFDTY+ +TKI +IR L+ +A+ H ++HQMDVKT
Subjt: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
Query: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
AFLNGDL EEIYM QPEGF I GQENKVCKL KSLYGLKQ PKQW+E F+ TL+ NGF N DTCV+SKV ++ICLYVDDMLI GT++E++ DTK
Subjt: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
Query: LFLSSHF
+FLSS F
Subjt: LFLSSHF
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| KAG7592238.1 Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | 5.4e-76 | 65.22 | Show/hide |
Query: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
WKEA+ +E DS++ NHTW++VDLP G K IRCKWI K+K K +GSID++KARLV G+ QK+G+DYFDTY+ +TKI +IR L+ +A+ H ++HQMDVKT
Subjt: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
Query: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
AFLNGDL EEIYM QPEGF I GQENKVCKL KSLYGLKQ PKQW+E F+ TL+ NGF N DTCV+SKV ++ICLYVDDMLI GT++E++ DTK
Subjt: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
Query: LFLSSHF
+FLSS F
Subjt: LFLSSHF
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 8.0e-104 | 89.42 | Show/hide |
Query: MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
MWKEAIKSELDSL MNHTW+LVDLPMG KPIRCKWIFKRKTKPNG I+RYKARLVVVGYTQK+G+DYFDTYS +TKITTIR LI LAAIH+ LIHQMDVK
Subjt: MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
Query: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
TAFLNG+LEEEIYMTQPEGF+ISGQENKVCKLRKSLYGLKQ PKQWYE FN TLI NGFKINSSDTCVYSK+ GADCILICLYVDDMLIFGTNMELITDT
Subjt: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
Query: KLFLSSHF
K FLSSHF
Subjt: KLFLSSHF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151TB60 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) | 4.9e-75 | 64.73 | Show/hide |
Query: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
WKEAI+ E+DS+ N+TW LVDLP G KPI CKWIFKRK P+GSI++YKARLV G+TQK+ ID+FDT++ + +I++IR LI LA+IH +IHQMDVKT
Subjt: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
Query: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
AFLNG+LEEEIYMTQPEG ++ GQENKVC+L KSLYGLKQ PKQW+E F+ L+N+GF +S+D CVY+K DC++ICLYVDDMLIFGT +++ TK
Subjt: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
Query: LFLSSHF
FL+S+F
Subjt: LFLSSHF
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| A0A2N9EQT1 Integrase catalytic domain-containing protein | 1.3e-78 | 67.63 | Show/hide |
Query: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
WK+AI SEL+S++ NHTW+LV+LP G K I KW+FK+K K +GSI+++KARLV GYTQK GIDYFDTYS +T++TTIR L+ +A+I+ +IHQMDVKT
Subjt: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
Query: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
AFLNGDL+EEIYM QPEGF + GQENKVCKLRKSLYGLKQ PKQW+E F+ TL++NGF +N SD CVYSK GA ++ICLYVDDMLIFGT+M + +TK
Subjt: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
Query: LFLSSHF
FLSS+F
Subjt: LFLSSHF
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| A0A2N9H4B0 Uncharacterized protein | 1.3e-78 | 67.63 | Show/hide |
Query: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
WK+AI SEL+S++ NHTW+LV+LP G K I KW+FK+K K +GSI+++KARLV GYTQK GIDYFDTYS +T++TTIR L+ +A+I+ +IHQMDVKT
Subjt: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
Query: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
AFLNGDL+EEIYM QPEGF + GQENKVCKLRKSLYGLKQ PKQW+E F+ TL++NGF +N SD CVYSK GA ++ICLYVDDMLIFGT+M + +TK
Subjt: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDTK
Query: LFLSSHF
FLSS+F
Subjt: LFLSSHF
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 3.9e-104 | 89.42 | Show/hide |
Query: MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
MWKEAIKSELDSL MNHTW+LVDLPMG KPIRCKWIFKRKTKPNG I+RYKARLVVVGYTQK+G+DYFDTYS +TKITTIR LI LAAIH+ LIHQMDVK
Subjt: MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
Query: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
TAFLNG+LEEEIYMTQPEGF+ISGQENKVCKLRKSLYGLKQ PKQWYE FN TLI NGFKINSSDTCVYSK+ GADCILICLYVDDMLIFGTNMELITDT
Subjt: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
Query: KLFLSSHF
K FLSSHF
Subjt: KLFLSSHF
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| A0A5N6PGV2 Reverse transcriptase Ty1/copia-type domain-containing protein | 5.6e-79 | 68.75 | Show/hide |
Query: MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
+WKEAIKSE+DS++ NHTW+L DLP G KPI KWIFK+K +P+G++D+YKARLV+ G+TQK G+DYFDTYS +TKITTIR LI +AAI+ LIHQMDVK
Subjt: MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
Query: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
TAFLNGDL+EEIYM QPEGF +SG E+KVCKLRKSLYGLKQ PK+WYE F+ TL +G+ +N+SD+CVYSK +LICLYVDDMLIFG +M I T
Subjt: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
Query: KLFLSSHF
K FLSS F
Subjt: KLFLSSHF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.8e-37 | 39.82 | Show/hide |
Query: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
W+EAI +EL++ +N+TW + P K + +W+F K G+ RYKARLV G+TQK IDY +T++ + +I++ R ++ L ++ +HQMDVKT
Subjt: WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKT
Query: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFG--ADCILICLYVDDMLIFGTNMELITD
AFLNG L+EEIYM P+G IS + VCKL K++YGLKQ + W+E F L F +S D C+Y G + I + LYVDD++I +M + +
Subjt: AFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFG--ADCILICLYVDDMLIFGTNMELITD
Query: TKLFLSSHFYIFVNDELGLYI
K +L F + +E+ +I
Subjt: TKLFLSSHFYIFVNDELGLYI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.3e-52 | 50.49 | Show/hide |
Query: EAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAF
+A++ E++SL N T+ LV+LP GK+P++CKW+FK K + + RYKARLVV G+ QK+GID+ + +S + K+T+IR ++ LAA + Q+DVKTAF
Subjt: EAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAF
Query: LNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGA-DCILICLYVDDMLIFGTNMELITDTKL
L+GDLEEEIYM QPEGF+++G+++ VCKL KSLYGLKQ P+QWY F+ + + + SD CVY K F + I++ LYVDDMLI G + LI K
Subjt: LNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGA-DCILICLYVDDMLIFGTNMELITDTKL
Query: FLSSHF
LS F
Subjt: FLSSHF
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| Q12472 Transposon Ty2-DR1 Gag-Pol polyprotein | 5.0e-16 | 31.16 | Show/hide |
Query: EAIKSELDSLVMNHTWDL--------VDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAI-----H
EA E++ L+ +TWD +D KK I +IF +K +KAR V G I + DTY + T+ ++ ++ +
Subjt: EAIKSELDSLVMNHTWDL--------VDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAI-----H
Query: SFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIF
+ I Q+D+ +A+L D++EE+Y+ P G +K+ +LRKSLYGLKQ WYE LIN + + +S VF + ICL+VDDM++F
Subjt: SFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIF
Query: ----GTNMELITDTK
N ++IT K
Subjt: ----GTNMELITDTK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.3e-44 | 42.27 | Show/hide |
Query: WKEAIKSELDSLVMNHTWDLVDLPMGKKPI-RCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
W+ A+ SE+++ + NHTWDLV P I C+WIF +K +GS++RYKARLV GY Q+ G+DY +T+S + K T+IR ++ +A S+ I Q+DV
Subjt: WKEAIKSELDSLVMNHTWDLVDLPMGKKPI-RCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
Query: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
AFL G L +++YM+QP GF + N VCKLRK+LYGLKQ P+ WY L+ GF + SDT ++ G + + +YVDD+LI G + L+ +T
Subjt: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
Query: KLFLSSHFYIFVNDELGLYI
LS F + ++EL ++
Subjt: KLFLSSHFYIFVNDELGLYI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.2e-43 | 41.36 | Show/hide |
Query: WKEAIKSELDSLVMNHTWDLVDLPMGKKPI-RCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
W++A+ SE+++ + NHTWDLV P I C+WIF +K +GS++RYKARLV GY Q+ G+DY +T+S + K T+IR ++ +A S+ I Q+DV
Subjt: WKEAIKSELDSLVMNHTWDLVDLPMGKKPI-RCKWIFKRKTKPNGSIDRYKARLVVVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVK
Query: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
AFL G L +E+YM+QP GF + + VC+LRK++YGLKQ P+ WY L+ GF + SDT ++ G I + +YVDD+LI G + L+ T
Subjt: TAFLNGDLEEEIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILICLYVDDMLIFGTNMELITDT
Query: KLFLSSHFYIFVNDELGLYI
LS F + +++L ++
Subjt: KLFLSSHFYIFVNDELGLYI
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