CuGenDBv2

Gene ID	Cmc12g0321101
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr12:7914757..7917460
RNA-Seq Expression	Cmc12g0321101
Synteny	Cmc12g0321101
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

89.71

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HL +VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV KAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF                                                              GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        GC LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF+SKCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DA FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGM PFEALY KCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEF +GDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

KAA0037901.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

89.37

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIV+SFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HL MVLQTLRDN+LYAKFSKCEFWLKQVSFLGHVV KAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRP+TVSEVRSFLGLAGYYRR                                                               GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        GC LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW HYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSA LITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCV SDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF+S+CLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEFA NNSYQATIGMAPFEALY KCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRFVGPFEILE+IGP+AYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.06

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV KAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF                                                              GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        GC LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF+S+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEF YNNSYQATIGMAPFEALY KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PL+IDENLSY EQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

89.94

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV KA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF                                                              GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        GC LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF+SKCLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALY KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEFE+ DKVFLKVAPM+GVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.29

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV KAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF                                                              GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        GC LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF+SKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDA FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYDKCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PLEIDENLSY EQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

89.71

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQ+LLDKGFIR SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HL +VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV KAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF                                                              GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        GC LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKR LAEAGQAVEFSLSSDGGLLFER LCVPSDSA KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF+SKCLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLH VPVSIVSD+DA FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGM PFEALY KCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEF +GDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRFV PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

A0A5A7TB42 Reverse transcriptase

0.0e+00

89.03

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSK EAEHE+HL +VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV KAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF                                                              GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        G  LMQQGKVVAYASRQLKSHEQNYPTHDLELAAV+FALKIWRHYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITR APLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCVPSDSA+K 
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEF+S+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDA FTS+FWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYDKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRFVG FEILERIGPVAYR+ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

A0A5A7U330 Reverse transcriptase

0.0e+00

90.06

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV KAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF                                                              GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        GC LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF+S+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEF YNNSYQATIGMAPFEALY KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRF+GPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PL+IDENLSY EQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

A0A5A7UAA8 Reverse transcriptase

0.0e+00

89.94

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV KA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF                                                              GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        GC LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF+SKCLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA FTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALY KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEFE+ DKVFLKVAPM+GVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

A0A5A7UP94 Pol protein

0.0e+00

90.29

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HL MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVV KAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
        VSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYRRF                                                              GL
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA
        GC LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADA
Subjt:  GCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF+SKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDA FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSW+SHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLH

Query:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYDKCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQS+QKSYADVRR DLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE
        ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDY+PLEIDENLSY EQPVE
Subjt:  ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVE

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.8e-124

31.44

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH+  VLQ L++  L    +KCEF   QV F+G+ + + G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
         +     I+ V  W +P    E+R FLG   Y R+F                                                               +
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G  L Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
          AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E++  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   K K Y D++  ++ EF+ GD V
Subjt:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT35 Transposon Tf2-2 polyprotein

1.8e-124

31.44

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH+  VLQ L++  L    +KCEF   QV F+G+ + + G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
         +     I+ V  W +P    E+R FLG   Y R+F                                                               +
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G  L Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
          AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E++  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   K K Y D++  ++ EF+ GD V
Subjt:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT36 Transposon Tf2-3 polyprotein

1.8e-124

31.44

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH+  VLQ L++  L    +KCEF   QV F+G+ + + G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
         +     I+ V  W +P    E+R FLG   Y R+F                                                               +
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G  L Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
          AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E++  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   K K Y D++  ++ EF+ GD V
Subjt:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT37 Transposon Tf2-4 polyprotein

1.8e-124

31.44

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH+  VLQ L++  L    +KCEF   QV F+G+ + + G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
         +     I+ V  W +P    E+R FLG   Y R+F                                                               +
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G  L Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
          AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E++  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   K K Y D++  ++ EF+ GD V
Subjt:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT41 Transposon Tf2-12 polyprotein

1.8e-124

31.44

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH+  VLQ L++  L    +KCEF   QV F+G+ + + G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAG

Query:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL
         +     I+ V  W +P    E+R FLG   Y R+F                                                               +
Subjt:  VSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRF--------------------------------------------------------------GL

Query:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G  L Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCFLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--
          AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  SKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF
        + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E++  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Subjt:  LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   K K Y D++  ++ EF+ GD V
Subjt:  EFPGSWESHLHLMEFAYNNSYQATIGMAPFEALYD-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

9.7e-17

41.67

Show/hide

Query:  HLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVYKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFGLGCFLMQQGKVVAYASRQLKSH
        HL MVLQ    ++ YA   KC F   Q+++LG  H++   GVS DPAK+EA+  W  P   +E+R FLGL GYYRR     F+   GK+V   +  LK +
Subjt:  HLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVYKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRRFGLGCFLMQQGKVVAYASRQLKSH

Query:  EQNYPTHDLELAAVVF-ALK
           +     E+AA+ F ALK
Subjt:  EQNYPTHDLELAAVVF-ALK

Sequences

Show/hide sequences

CDS sequence

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ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTAA
GAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTAC
AGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAGCATTTCGTTCCAGGTATGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGA
CGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGAAGCATTTATGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGT
TTTGGCTGAAGCAGGTGTCCTTTCTGGGCCATGTGGTTTATAAGGCTGGAGTCTCTGTGGATCCGGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTC
AGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGGTTTGGGTTGCTTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAA
GAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTAAATGGTGAAAAGATACAGATATTCACGG
ATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAAGC
AAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACTCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGT
GTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAAAGTAACGATCCTTATTTGGTGGAGAAACGTG
GCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTCCCGTCAGATAGTGCGGTTAAGACAGAATTA
TTATCTGAGGCTCACAGTTCCCCATTCTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGA
ATTTATTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCA
TGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTAT
ACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTGCATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCATTTCACTTCCAAATTCTGGAA
GGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTCTAGAGGATATGTTGCGAG
CGTGTGCATTGGAATTTCCAGGTAGCTGGGAATCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTG
TACGACAAATGTTGTAGATCCCCAGTTTGCTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGCCCTGAGTTAGTTCAATCTACCAACGAAGCGATACAGAAGATTAGATC
ACGCATGCATACCGCTCAGAGTAAACAGAAGAGTTATGCAGATGTGAGGCGGAATGATCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAG
GTGTCTTACGATTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTAGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCA
CTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGATGAAAACTTGAGCTA
TGCTGAACAACCCGTTGAGTCTTATGGCGGAATCACCGGGTAG

mRNA sequence

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Protein sequence

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MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHY
EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLCMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVYKAGVSVDPAKIEAVTSWTRPSTV
SEVRSFLGLAGYYRRFGLGCFLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLNGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPS
KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTEL
LSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFISKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTY
TASKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWESHLHLMEFAYNNSYQATIGMAPFEAL
YDKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSKQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPS
LSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVESYGGITG

Cmc12g0321101 (gene) of Melon (Charmono) v1.1 genome