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Cmc12g0321151 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321151
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCMiso1.1chr12:8008656..8013436
RNA-Seq ExpressionCmc12g0321151
SyntenyCmc12g0321151
Gene Ontology termsNA
InterPro domainsIPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEW99094.1 hypothetical protein [Tanacetum cinerariifolium]2.7e-2347.17Show/hide
Query:  TIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLLL
        T+V+N++ E +PT +  GW +CI+Y+KLNE T+KDHFP P++DQM+++     Y+CFLDGF  + + L+  + K K  LHV++ER P   C   C M   
Subjt:  TIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLLL

Query:  HFKDAC
        HFKDAC
Subjt:  HFKDAC

GEX90273.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium]6.5e-2549.06Show/hide
Query:  TIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLLL
        T+V+N++ E +PTR+  GW +CI+YRKLNE T+KDHFP P++DQM++++ G  Y+CFLDGF  + +  ++   K K  LHV++ER P   C   C M   
Subjt:  TIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLLL

Query:  HFKDAC
        HFKDAC
Subjt:  HFKDAC

GEY56370.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium]1.2e-2348.65Show/hide
Query:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL
        +T+VEN+K E +PTR+  GW +CI+YRKLN+ T+KDHFP  ++DQM++++ G   +CFLDGFLV  K+     T+ +PL  V +E   + ECHL   MLL
Subjt:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL

Query:  LHFKDACLVYS
         HFKD    Y+
Subjt:  LHFKDACLVYS

GFA65978.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium]2.1e-2351.02Show/hide
Query:  IVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL
        +++ND+ E VPT +  GW +CI+YRKLNE T+KDHFP P++DQM++++ G  Y+CFLDGF  + + L+ + TK KP LHV +E  P  EC L   MLL
Subjt:  IVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL

GFB05840.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium]1.7e-2550.94Show/hide
Query:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL
        MT+++ND+ E VPTR+  GW +CI+YRKLNE T+KDHFP P++DQM++++ G  Y+CFLDGF  + +  +   TK KP LHV++E      C LD VMLL
Subjt:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL

Query:  LHFKDA
            DA
Subjt:  LHFKDA

TrEMBL top hitse value%identityAlignment
A0A699JU08 Reverse transcriptase domain-containing protein (Fragment)3.0e-2349.06Show/hide
Query:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL
        MT+++N+K E VPTR+  GW +CI+YRKLNE T+KDHFP P++DQM++++ G  Y+CFLDGF  + ++     TK KP L   +E      C LD VMLL
Subjt:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL

Query:  LHFKDA
            DA
Subjt:  LHFKDA

A0A699K2M7 Reverse transcriptase domain-containing protein (Fragment)1.0e-2351.02Show/hide
Query:  IVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL
        +++ND+ E VPT +  GW +CI+YRKLNE T+KDHFP P++DQM++++ G  Y+CFLDGF  + + L+ + TK KP LHV +E  P  EC L   MLL
Subjt:  IVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL

A0A699MJ49 Reverse transcriptase domain-containing protein6.6e-2347.17Show/hide
Query:  TIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLLL
        T+V+ND+ E +PTR+  GW +CI+YRKLNE T KDHFP P++DQM++++ G  Y+CFLDGF  + +  +    + K  L  ++ER P   C   C M   
Subjt:  TIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLLL

Query:  HFKDAC
        HFKDAC
Subjt:  HFKDAC

A0A6L2K5C9 RT_RNaseH_2 domain-containing protein6.6e-2350.96Show/hide
Query:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL
        +T+VEN+  E +PTR+  GW +CI+YRKLN+ T+KDHFP P++DQM+K++ G   +CFLDGFLV  K  L   T+  PLL V +E   + EC L   MLL
Subjt:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL

Query:  LHFK
         H K
Subjt:  LHFK

A0A6L2KDD2 Reverse transcriptase domain-containing protein3.9e-2350.96Show/hide
Query:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL
        +T+VEN+  E +PTR+  GW +CI+YRKLN+ T+KDHFP P+LDQM+K++ G  ++CFLDGF V  K LL   T+ + L  V +E   + EC L   MLL
Subjt:  MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLL

Query:  LHFK
         HFK
Subjt:  LHFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATTGTGGAAAATGACAAAGGTGAGTTCGTTCCAACTCGTATACAAAATGGTTGGCACATATGTATAAACTATAGGAAGTTAAATGAGGTAACCAAAAAAGATCA
TTTCCCTTTTCCTTATTTAGATCAAATGATAAAACAAATAACTGGAAAATCATATTTTTGCTTTCTTGATGGTTTTCTGGTTTTTACCAAATACCTTTTACATGTAATGA
CCAAAACAAAACCACTTTTACATGTGATTTTGGAAAGGTTTCCTTTAGAAGAATGCCATTTGGACTGTGTAATGCTCTTGTTACATTTCAAAGATGCATGCTTAGTATAT
TCTCTGATTTTGTTGGTAAATGCATAG
mRNA sequenceShow/hide mRNA sequence
TTTCAATCTCTCTCAACTTTGTCCAACTTTCCACTCAAAAGAAATAAATTTCCCACAATTTGTTTCTCCAATCTCTCCGCACAAATCCTTTTTTTAGTAGATTTGCTTGA
TCCAAATGGAGAAGTAATTTCTTTAAAGGGTGAGGTTCCCAAGGTGGCTTCATGGGGAGTATATGGCTTGATTGGTCACCATAACGATTAATGTACTGACTTGAAAGAGG
TAAGTGTGGTAGGCATTTTTAGGATGAACGACCCACAAAGAGGCACTTATAACTCAGGATGGAGGGATCATCCCACCTTAGATTGGGTCAACAAGACCAAAAGTCGTCTA
ACACTTCTTCCTCTTCTTCTTCATCACAAGGGCAAGGTACGTATGTTGAAGAAATCATCTCCAAATTAGCCCTTAGTTCAAATAGCTTCAAAACAAATTTTGAAAAGAAT
CTAGCTAGGACTACTAAACAAACTGGTAATGCAATTGAGTCGATTAGGAAGGAAATGGATGATTATATGCTTAAAATGAATGCTTCAATTTCATAACTAAGAGATAATTT
GAACTAACTAGCCATTGCTATTATTAAGATGAAATGGAAAGTCAAGTTACCTTCCTAACTTGACCATGCTAAAGGTAGTGCAATAACTCTACTGAGTGGTAGGACTCTAA
ATAAACATGATAATGTTTCCTTATCCGAGGATGAACCAAAATCTGTTAATGTCGACTCTAATACCAATGAAGCAAAAAAGGTTAACACCTTCAAGGAAGGAATTCAAAAC
CGATAAGGAGATCCTTGAAGTCTTCAAAAGGTTCAGATCAATCTCCATCTCTTGATTTCCATCAAGAAAATCCCGAGGTACGCCAAGTTTCTAAAAGAGTTATGCACAAA
TAAAAGAAGAAGTAGAGATCAAGAAAAAGCAACAGTGAGTGGAAATGTTTCTGCACTTCTAAAGAAAAACCTACTTGAAAATTGTAGGGATCTAGGATAACAAGATTGAA
CTTAAGGTTCTCCCTTCACACCTAAATTATGTATTCTTGAGAGACAATAGCACCCTTTCGATCATAATCTCGAGGGAGCTTATTGGGGAGGACGAGGAATGATTACTAGA
GATTTTAAAGAGGAACAAGCAAGCCACAGGATGGACGTTGGATGACTTGAAAGGTATAGGTCTATCATTTTGCACCCATATAATTGACCTTAAATAAGGAGCAAAAGATA
AGGTGCAACCTCAGAGGTGATTGAACCCAACCTTAAGAAAGGTGGTGAAGAAAGAAGTTTTGAAGTTAAAGATGGTGAAATCATATAGCCTATAACAAATAGTACGTGGG
TAAGTCCAATACATGTGGTACCGAAAATATTTGGCATGACAATTGTGGAAAATGACAAAGGTGAGTTCGTTCCAACTCGTATACAAAATGGTTGGCACATATGTATAAAC
TATAGGAAGTTAAATGAGGTAACCAAAAAAGATCATTTCCCTTTTCCTTATTTAGATCAAATGATAAAACAAATAACTGGAAAATCATATTTTTGCTTTCTTGATGGTTT
TCTGGTTTTTACCAAATACCTTTTACATGTAATGACCAAAACAAAACCACTTTTACATGTGATTTTGGAAAGGTTTCCTTTAGAAGAATGCCATTTGGACTGTGTAATGC
TCTTGTTACATTTCAAAGATGCATGCTTAGTATATTCTCTGATTTTGTTGGTAAATGCATAGAAGTATTTATGGATGATTTTACGGTCTAT
Protein sequenceShow/hide protein sequence
MTIVENDKGEFVPTRIQNGWHICINYRKLNEVTKKDHFPFPYLDQMIKQITGKSYFCFLDGFLVFTKYLLHVMTKTKPLLHVILERFPLEECHLDCVMLLLHFKDACLVY
SLILLVNA