CuGenDBv2

Gene ID	Cmc12g0321221
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Genome location	CMiso1.1chr12:8248754..8249442
RNA-Seq Expression	Cmc12g0321221
Synteny	Cmc12g0321221
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domains	IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]

9.4e-104

85.09

Show/hide

Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]

9.4e-104

85.09

Show/hide

Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]

9.4e-104

85.09

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Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

9.4e-104

85.09

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Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

9.4e-104

85.09

Show/hide

Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM64 Beta-galactosidase

4.5e-104

85.09

Show/hide

Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

A0A5A7V0Y9 Beta-galactosidase

4.5e-104

85.09

Show/hide

Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

A0A5A7VLQ7 Beta-galactosidase

4.5e-104

85.09

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Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

A0A5D3BJK7 Beta-galactosidase

4.5e-104

85.09

Show/hide

Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

A0A5D3C4T4 Beta-galactosidase

4.5e-104

85.09

Show/hide

Query:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG
        MEEMKALEKNRTW+IC LPKGHK VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP                       LDVKNAFLNG
Subjt:  MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNG

Query:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        DLVE+VYMSPPPGFEAQFGQ VCKLQKSLYGLKQS RAWFDRFTTFVKS GYSQG+SDHTLFTKASKTGKI ILIVYVDDIVLTGDDQTEIS LKQRMGD
Subjt:  DLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
        EFEIKDLGNLKYFLGMEV RSKEGISVS
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

1.5e-35

35.24

Show/hide

Query:  EMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGDL
        E+ A + N TW I   P+    V  +WVFS+KY   G   R+KARLVA+GFTQ Y IDY ETF+P                       +DVK AFLNG L
Subjt:  EMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGDL

Query:  VEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLF-TKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGDE
         E++YM  P G       +VCKL K++YGLKQ+ R WF+ F   +K   +   + D  ++        + + +++YVDD+V+   D T ++  K+ + ++
Subjt:  VEKVYMSPPPGFEAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLF-TKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGDE

Query:  FEIKDLGNLKYFLGMEVTRSKEGISVS
        F + DL  +K+F+G+ +   ++ I +S
Subjt:  FEIKDLGNLKYFLGMEVTRSKEGISVS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

4.2e-46

44.14

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Query:  EEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGD
        EEM++L+KN T+K+  LPKG + + CKWVF LK   D  L R+KARLV KGF Q  GID+ E FSP                       LDVK AFL+GD
Subjt:  EEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGD

Query:  LVEKVYMSPPPGFEAQFGQH-VCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        L E++YM  P GFE    +H VCKL KSLYGLKQ+ R W+ +F +F+KS  Y +  SD  ++ K       +IL++YVDD+++ G D+  I+ LK  +  
Subjt:  LVEKVYMSPPPGFEAQFGQH-VCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSK
         F++KDLG  +  LGM++ R +
Subjt:  EFEIKDLGNLKYFLGMEVTRSK

P25600 Putative transposon Ty5-1 protein YCL074W

6.5e-15

31.85

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Query:  LDVKNAFLNGDLVEKVYMSPPPGF-EAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQT
        +DV  AFLN  + E +Y+  PPGF   +   +V +L   +YGLKQ+   W +     +K  G+ +   +H L+ +++  G I I  VYVDD+++      
Subjt:  LDVKNAFLNGDLVEKVYMSPPPGF-EAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQT

Query:  EISLLKQRMGDEFEIKDLGNLKYFLGMEVTRSKEG
            +KQ +   + +KDLG +  FLG+ + +S  G
Subjt:  EISLLKQRMGDEFEIKDLGNLKYFLGMEVTRSKEG

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

5.6e-43

41.67

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Query:  EMKALEKNRTWKICVLPKGHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGD
        E+ A   N TW +   P  H   VGC+W+F+ KY +DG+L+R+KARLVAKG+ Q  G+DY+ETFSP                       LDV NAFL G 
Subjt:  EMKALEKNRTWKICVLPKGHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGD

Query:  LVEKVYMSPPPGF-EAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        L + VYMS PPGF +     +VCKL+K+LYGLKQ+ RAW+     ++ + G+    SD +LF    +   IV ++VYVDDI++TG+D T +      +  
Subjt:  LVEKVYMSPPPGF-EAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
         F +KD   L YFLG+E  R   G+ +S
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

9.0e-41

39.04

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Query:  EMKALEKNRTWKICVLPKGHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGD
        E+ A   N TW +   P      VGC+W+F+ K+ +DG+L+R+KARLVAKG+ Q  G+DY+ETFSP                       LDV NAFL G 
Subjt:  EMKALEKNRTWKICVLPKGHKN-VGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGD

Query:  LVEKVYMSPPPGF-EAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD
        L ++VYMS PPGF +     +VC+L+K++YGLKQ+ RAW+    T++ + G+    SD +LF    +   I+ ++VYVDDI++TG+D   +      +  
Subjt:  LVEKVYMSPPPGF-EAQFGQHVCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGD

Query:  EFEIKDLGNLKYFLGMEVTRSKEGISVS
         F +K+  +L YFLG+E  R  +G+ +S
Subjt:  EFEIKDLGNLKYFLGMEVTRSKEGISVS

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

1.5e-54

44.59

Show/hide

Query:  EEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGD
        +E+ A+E   TW+IC LP   K +GCKWV+ +KY +DGT++R+KARLVAKG+TQ  GID+ ETFSP                       LD+ NAFLNGD
Subjt:  EEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSP-----------------------LDVKNAFLNGD

Query:  LVEKVYMSPPPGFEAQFGQH-----VCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQ
        L E++YM  PPG+ A+ G       VC L+KS+YGLKQ+ R WF +F+  +   G+ Q +SDHT F K + T   + ++VYVDDI++  ++   +  LK 
Subjt:  LVEKVYMSPPPGFEAQFGQH-----VCKLQKSLYGLKQSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQ

Query:  RMGDEFEIKDLGNLKYFLGMEVTRSKEGISV
        ++   F+++DLG LKYFLG+E+ RS  GI++
Subjt:  RMGDEFEIKDLGNLKYFLGMEVTRSKEGISV

ATMG00810.1 DNA/RNA polymerases superfamily protein

1.9e-06

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Query:  LIVYVDDIVLTGDDQTEISLLKQRMGDEFEIKDLGNLKYFLGMEVTRSKEGISVS
        L++YVDDI+LTG   T +++L  ++   F +KDLG + YFLG+++     G+ +S
Subjt:  LIVYVDDIVLTGDDQTEISLLKQRMGDEFEIKDLGNLKYFLGMEVTRSKEGISVS

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)

3.0e-15

55.22

Show/hide

Query:  EEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSPL
        EE+ AL +N+TW +   P     +GCKWVF  K  +DGTLDR KARLVAKGF Q  GI + ET+SP+
Subjt:  EEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSPL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGAGATGAAGGCTCTTGAAAAGAATAGAACTTGGAAGATCTGTGTTCTACCCAAGGGACATAAAAATGTAGGATGCAAATGGGTATTCTCTCTCAAATACAAAGC
AGATGGTACGCTTGATAGACATAAGGCAAGGTTAGTTGCAAAGGGATTCACTCAAACCTATGGTATTGACTATTCAGAAACTTTTTCTCCATTGGATGTTAAGAATGCCT
TTTTGAATGGAGACCTTGTGGAGAAAGTCTACATGAGCCCCCCACCAGGATTTGAAGCCCAATTTGGTCAGCATGTGTGTAAACTCCAAAAATCCCTATATGGTCTAAAA
CAGTCTCTGAGAGCATGGTTTGACAGATTCACTACCTTTGTCAAGTCCCATGGGTACAGTCAAGGGAACTCTGACCATACTCTATTTACAAAGGCTTCCAAGACAGGGAA
GATTGTTATTCTAATAGTTTATGTAGATGACATTGTTTTGACTGGAGATGATCAAACAGAAATCAGTCTACTAAAGCAGAGAATGGGTGATGAATTTGAAATCAAAGATT
TGGGAAATCTGAAATATTTCCTTGGAATGGAGGTGACCAGATCTAAAGAAGGTATTTCCGTGTCTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEEMKALEKNRTWKICVLPKGHKNVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYGIDYSETFSPLDVKNAFLNGDLVEKVYMSPPPGFEAQFGQHVCKLQKSLYGLK
QSLRAWFDRFTTFVKSHGYSQGNSDHTLFTKASKTGKIVILIVYVDDIVLTGDDQTEISLLKQRMGDEFEIKDLGNLKYFLGMEVTRSKEGISVS

Cmc12g0321221 (gene) of Melon (Charmono) v1.1 genome