; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0321231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr12:8249479..8249841
RNA-Seq ExpressionCmc12g0321231
SyntenyCmc12g0321231
Gene Ontology termsNA
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]8.8e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]8.8e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]8.8e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]8.8e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]8.8e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

TrEMBL top hitse value%identityAlignment
A0A5A7SM64 Beta-galactosidase4.3e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

A0A5A7VLQ7 Beta-galactosidase4.3e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

A0A5D3BJK7 Beta-galactosidase4.3e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

A0A5D3C4T4 Beta-galactosidase4.3e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

A0A5D3D7S1 Cysteine-rich RLK (Receptor-like protein kinase) 84.3e-6298.33Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQ LVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHME VNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAGSVIDRKSTSGYCTFV
Subjt:  SDWAGSVIDRKSTSGYCTFV

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1617.1e-1444.83Show/hide
Query:  YQCLVGKLIYLS-HTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGY
        Y   VG ++YL   TRPD++ AV V+SQF   P   H + + R+LRYL++T   GL F +     +  Y+D+DWAG V  R+STSGY
Subjt:  YQCLVGKLIYLS-HTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGY

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.5e-1538.21Show/hide
Query:  MLGCRPADTPIEFNCKLGNS------DDQVPVDKEQYQCLVGKLIY-LSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRK
        M   +P  TP+  + KL         +++  + K  Y   VG L+Y +  TRPDI+ AV VVS+F++ P ++H E V  ILRYL+ T G  L F  ++  
Subjt:  MLGCRPADTPIEFNCKLGNS------DDQVPVDKEQYQCLVGKLIY-LSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRK

Query:  TIEAYTDSDWAGSVIDRKSTSGY
         ++ YTD+D AG + +RKS++GY
Subjt:  TIEAYTDSDWAGSVIDRKSTSGY

P92519 Uncharacterized mitochondrial protein AtMg008102.1e-2140.83Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML C+P  TP+        S  + P D   ++ +VG L YL+ TRPDIS+AV++V Q M  P     +++ R+LRY+K T   GL   K ++  ++A+ D
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAG    R+ST+G+CTF+
Subjt:  SDWAGSVIDRKSTSGYCTFV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.4e-2342.5Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        M+  +P  TP+  + KL         D  +Y+ +VG L YL+ TRPDIS+AV+ +SQFM  P E+H++ + RILRYL  TP  G+  +K N  ++ AY+D
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        +DWAG   D  ST+GY  ++
Subjt:  SDWAGSVIDRKSTSGYCTFV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.5e-2141.32Show/hide
Query:  MLGCRPADTPIEFNCKLG-NSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYT
        ML  +P  TP+  + KL  +S  ++P D  +Y+ +VG L YL+ TRPD+S+AV+ +SQ+M  P + H   + R+LRYL  TP  G+  +K N  ++ AY+
Subjt:  MLGCRPADTPIEFNCKLG-NSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYT

Query:  DSDWAGSVIDRKSTSGYCTFV
        D+DWAG   D  ST+GY  ++
Subjt:  DSDWAGSVIDRKSTSGYCTFV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.8e-2036.67Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        +LGC+P+  P++ +           VD + Y+ L+G+L+YL  TR DISFAV+ +SQF +AP   H + V +IL Y+K T G+GL +       ++ ++D
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        + +      R+ST+GYC F+
Subjt:  SDWAGSVIDRKSTSGYCTFV

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.3e-1441.46Show/hide
Query:  IYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV
        +YL+ TRPD++FAV+ +SQF  A     M+ V ++L Y+K T G+GL +  T+   ++A+ DSDWA     R+S +G+C+ V
Subjt:  IYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV

ATMG00810.1 DNA/RNA polymerases superfamily protein1.5e-2240.83Show/hide
Query:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD
        ML C+P  TP+        S  + P D   ++ +VG L YL+ TRPDIS+AV++V Q M  P     +++ R+LRY+K T   GL   K ++  ++A+ D
Subjt:  MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTD

Query:  SDWAGSVIDRKSTSGYCTFV
        SDWAG    R+ST+G+CTF+
Subjt:  SDWAGSVIDRKSTSGYCTFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGTAGGTAA
ATTAATTTACTTATCCCATACTCGTCCTGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGTTGTTAACAGAATCT
TGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGACAGA
AAGTCTACGTCCGGTTATTGTACCTTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGATGTCGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTTGTAGGTAA
ATTAATTTACTTATCCCATACTCGTCCTGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGTTGTTAACAGAATCT
TGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGACAGA
AAGTCTACGTCCGGTTATTGTACCTTTGTTTGA
Protein sequenceShow/hide protein sequence
MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEVVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDR
KSTSGYCTFV