; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0321261 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321261
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr12:8321721..8322428
RNA-Seq ExpressionCmc12g0321261
SyntenyCmc12g0321261
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025998.1 pol protein [Cucumis melo var. makuwa]3.4e-12692.77Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWW+ MKR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMD ITGLP+TLKGYTVIWVVVDR+ KSAHFV  KSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQ+ALGTRLDFSTA H QTDGQTERLNQ+LEDM RACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI
        EALYGKCCRS VCWGEVGEQ MLGPELVQTTNAAI
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI

KAA0032582.1 pol protein [Cucumis melo var. makuwa]1.8e-130100Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPE
        EALYGKCCRSSVCWGEVGEQMMLGPE
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPE

KAA0039213.1 pol protein [Cucumis melo var. makuwa]1.2e-12692.77Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWW+NMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMD ITGLP+TLKGYTVIWVVVD++ KSAHFV  KSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSI+SDRD RFTSKFWKGLQLALGTRLDFSTA H QTDGQTERLNQ+ EDM RACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI
        EALYGKCCRS VCWGEVGEQ MLGPELVQTTNAAI
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI

TYK18480.1 pol protein [Cucumis melo var. makuwa]1.2e-12692.77Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWW+NMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMD ITGLP+TLKGYTVIWVVVD++ KSAHFV  KSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSI+SDRD RFTSKFWKGLQLALGTRLDFSTA H QTDGQTERLNQ+ EDM RACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI
        EALYGKCCRS VCWGEVGEQ MLGPELVQTTNAAI
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI

TYK20443.1 pol protein [Cucumis melo var. makuwa]3.4e-12692.77Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWW+ MKR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMD ITGLP+TLKGYTVIWVVVDR+ KSAHFV  KSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQ+ALGTRLDFSTA H QTDGQTERLNQ+LEDM RACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI
        EALYGKCCRS VCWGEVGEQ MLGPELVQTTNAAI
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI

TrEMBL top hitse value%identityAlignment
A0A5A7SIJ5 Reverse transcriptase1.7e-12692.77Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWW+ MKR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMD ITGLP+TLKGYTVIWVVVDR+ KSAHFV  KSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQ+ALGTRLDFSTA H QTDGQTERLNQ+LEDM RACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI
        EALYGKCCRS VCWGEVGEQ MLGPELVQTTNAAI
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI

A0A5A7SNG2 Pol protein8.5e-131100Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPE
        EALYGKCCRSSVCWGEVGEQMMLGPE
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPE

A0A5A7T8B1 Pol protein5.7e-12792.77Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWW+NMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMD ITGLP+TLKGYTVIWVVVD++ KSAHFV  KSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSI+SDRD RFTSKFWKGLQLALGTRLDFSTA H QTDGQTERLNQ+ EDM RACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI
        EALYGKCCRS VCWGEVGEQ MLGPELVQTTNAAI
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI

A0A5D3BTN0 Reverse transcriptase1.7e-12692.77Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWW+ MKR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMD ITGLP+TLKGYTVIWVVVDR+ KSAHFV  KSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQ+ALGTRLDFSTA H QTDGQTERLNQ+LEDM RACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI
        EALYGKCCRS VCWGEVGEQ MLGPELVQTTNAAI
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI

A0A5D3D4M7 Pol protein5.7e-12792.77Show/hide
Query:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ
        MYQDLRSVYWW+NMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMD ITGLP+TLKGYTVIWVVVD++ KSAHFV  KSTYTASKWGQ
Subjt:  MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQ

Query:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
        LYMTEIVRLHGVPVSI+SDRD RFTSKFWKGLQLALGTRLDFSTA H QTDGQTERLNQ+ EDM RACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF
Subjt:  LYMTEIVRLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF

Query:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI
        EALYGKCCRS VCWGEVGEQ MLGPELVQTTNAAI
Subjt:  EALYGKCCRSSVCWGEVGEQMMLGPELVQTTNAAI

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.1e-3134.69Show/hide
Query:  YWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIVR
        + WK +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMD IT LP +  GY  ++VVVDR  K A  V    + TA +  +++   ++ 
Subjt:  YWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
          G P  I++D D  FTS+ WK         + FS     QTDGQTER NQ +E + R        +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT41 Transposon Tf2-12 polyprotein1.1e-3134.69Show/hide
Query:  YWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIVR
        + WK +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMD IT LP +  GY  ++VVVDR  K A  V    + TA +  +++   ++ 
Subjt:  YWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
          G P  I++D D  FTS+ WK         + FS     QTDGQTER NQ +E + R        +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein7.6e-3639.18Show/hide
Query:  VYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIV
        +Y+W  ++  +  ++  C+ CQ +K+ R R  GLLQPL +   +W  +SMD +TGLP T     +I VVVDR  K AHF++ + T  A++   L    I 
Subjt:  VYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE
          HG P +I SDRD R T+  ++ L   LG +   S+A H QTDGQ+ER  Q L  + RA V     +W  +L  +EF YN++   T+G +PFE
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.2e-3538.66Show/hide
Query:  VYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIV
        +Y+W  ++  +  ++  C+ CQ +K+ R R  GLLQPL +   +W  +SMD +TGLP T     +I VVVDR  K AHF++ + T  A++   L    I 
Subjt:  VYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIV

Query:  RLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE
          HG P +I SDRD R T+  ++ L   LG +   S+A H QTDGQ+ER  Q L  + RA       +W  +L  +EF YN++   T+G +PFE
Subjt:  RLHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFE

Q9UR07 Transposon Tf2-11 polyprotein1.1e-3134.69Show/hide
Query:  YWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIVR
        + WK +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMD IT LP +  GY  ++VVVDR  K A  V    + TA +  +++   ++ 
Subjt:  YWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIVR

Query:  LHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
          G P  I++D D  FTS+ WK         + FS     QTDGQTER NQ +E + R        +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  LHGVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAAGAACATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGGTGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAACG
ACCAGCCGGGTTGTTGCAACCTTTGAGTGTGCCAGGGTGGAAATGGGAGAGTGTGTCGATGGACTCCATTACAGGACTGCCCAGGACTCTAAAGGGCTATACAGTGATCT
GGGTTGTTGTCGACAGAATCATGAAGTCAGCCCACTTTGTTTCAGTGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACAGAGATAGTGAGACTGCAT
GGAGTACCTGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCAAAGTTCTGGAAAGGACTTCAACTTGCATTAGGCACGAGGTTAGACTTCAGCACGGCCTTACA
CCATCAGACTGATGGTCAGACAGAGAGATTGAACCAGGTTTTGGAAGACATGTCGCGAGCCTGCGTGCTAGAGTTTTCAGGGAGTTGGGACTCCCATTTGCATTTGATGG
AGTTCGCCTATAATAACAGCTACCAGGCTACTATCGGTATGGCACCATTTGAGGCTCTGTATGGTAAGTGTTGTAGATCTTCTGTCTGCTGGGGCGAGGTTGGTGAGCAG
ATGATGCTAGGCCCCGAGTTAGTTCAGACCACCAATGCAGCCATATAG
mRNA sequenceShow/hide mRNA sequence
ATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAAGAACATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGGTGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAACG
ACCAGCCGGGTTGTTGCAACCTTTGAGTGTGCCAGGGTGGAAATGGGAGAGTGTGTCGATGGACTCCATTACAGGACTGCCCAGGACTCTAAAGGGCTATACAGTGATCT
GGGTTGTTGTCGACAGAATCATGAAGTCAGCCCACTTTGTTTCAGTGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACAGAGATAGTGAGACTGCAT
GGAGTACCTGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCAAAGTTCTGGAAAGGACTTCAACTTGCATTAGGCACGAGGTTAGACTTCAGCACGGCCTTACA
CCATCAGACTGATGGTCAGACAGAGAGATTGAACCAGGTTTTGGAAGACATGTCGCGAGCCTGCGTGCTAGAGTTTTCAGGGAGTTGGGACTCCCATTTGCATTTGATGG
AGTTCGCCTATAATAACAGCTACCAGGCTACTATCGGTATGGCACCATTTGAGGCTCTGTATGGTAAGTGTTGTAGATCTTCTGTCTGCTGGGGCGAGGTTGGTGAGCAG
ATGATGCTAGGCCCCGAGTTAGTTCAGACCACCAATGCAGCCATATAG
Protein sequenceShow/hide protein sequence
MYQDLRSVYWWKNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDSITGLPRTLKGYTVIWVVVDRIMKSAHFVSVKSTYTASKWGQLYMTEIVRLH
GVPVSIVSDRDARFTSKFWKGLQLALGTRLDFSTALHHQTDGQTERLNQVLEDMSRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQ
MMLGPELVQTTNAAI