; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0321311 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321311
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCMiso1.1chr12:8380479..8381360
RNA-Seq ExpressionCmc12g0321311
SyntenyCmc12g0321311
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032588.1 uncharacterized protein E6C27_scaffold43053G00550 [Cucumis melo var. makuwa]2.0e-16098.6Show/hide
Query:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
        MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
Subjt:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN

Query:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
        ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
Subjt:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK

Query:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNL
        RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRR +  L
Subjt:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNL

TYK20897.1 uncharacterized protein E5676_scaffold284G00330 [Cucumis melo var. makuwa]2.0e-16098.6Show/hide
Query:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
        MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
Subjt:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN

Query:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
        ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
Subjt:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK

Query:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNL
        RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRR +  L
Subjt:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNL

TYK28756.1 uncharacterized protein E5676_scaffold403G001090 [Cucumis melo var. makuwa]6.3e-15490.1Show/hide
Query:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
        MSLLTEYKDIFAWSYKEMP LDPKV +HHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEA FIR+VKYPTWIANI+PV+KKNGQLRVCV F DLNN
Subjt:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN

Query:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
        ACPKD+FPL ITEI+VDATTGHE LSFMDGSSGYNQI++ LSDEEMTAFRTPKGIYCYKVMPFGLKN  ATYQRAMQKVF DMLHKYVECY+DDLVVKSK
Subjt:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK

Query:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF
        RRQDHLKDL+VVFDRLRKYQLRMNPL+C F +TSGKF+ FIVRHRGIEIDQSKID IQKMPRPKSLHDLRSLQGRLAYIRRF+SNLAGRCQPF
Subjt:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]8.3e-15489.76Show/hide
Query:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
        MSLLTEY+DIFAWSYKEMP LDPKVA+HHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEA FIR+VKYPTWIANI+PV+KKNGQLRVCV F DLNN
Subjt:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN

Query:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
        ACPKD+FPL ITEI+VDATTGHE LSFMDGSSGYNQI+M LSDEEMTAFRTPKGIYCYKVMPFGLKN+ ATYQRAMQKVF DMLH+YVECY+DDLVVK+K
Subjt:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK

Query:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF
        RRQDHLKDL+VVFDRLRKYQLRMNPL+C F VTSGKF+ FIVRHRGIEIDQSKID IQKM RPKSLHDLRSLQGRLAYIRRF+SNLAGRCQPF
Subjt:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF

XP_031737039.1 uncharacterized protein LOC116402129 [Cucumis sativus]8.3e-15489.76Show/hide
Query:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
        MSLLTEY+DIFAWSYKEMP LDPKVA+HHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEA FIR+VKYPTWIANI+PV+KKNGQLRVCV F DLNN
Subjt:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN

Query:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
        ACPKD+FPL ITEI+VDATTGHE LSFMDGSSGYNQI+M LSDEEMTAFRTPKGIYCYKVMPFGLKN+ ATYQRAMQKVF DMLH+YVECY+DDLVVK+K
Subjt:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK

Query:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF
        RRQDHLKDL+VVFDRLRKYQLRMNPL+C F VTSGKF+ FIVRHRGIEIDQSKID IQKM RPKSLHDLRSLQGRLAYIRRF+SNLAGRCQPF
Subjt:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF

TrEMBL top hitse value%identityAlignment
A0A5A7SPV8 Ribonuclease H1.9e-15190.28Show/hide
Query:  EYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACPKD
        EYKDIFAWSYKEMP LDPKVA+HHLAIKPGYR IKQAQRRFRPELIPQI+VEVNKLIEA FIR+VKYPTWIANI+PV+KKNGQLRVCV F DLNNACPKD
Subjt:  EYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACPKD

Query:  EFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQDH
        +FPL ITEI+VDATTGHE LSFMDGSSGYNQI+M LSDEEMTAFRTPKGIYCYKV+PFGLKN  ATYQRAMQKVF DMLHKYVECY+DDLVVKSKRRQDH
Subjt:  EFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQDH

Query:  LKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF
        LKDL+VVFDRLRKYQLRMNPL+C FSVTSGKF+ FIVRHRGIEIDQSKID IQKMPRPKSLHDLRSLQGRLAYIRRF+SNLAGRCQPF
Subjt:  LKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF

A0A5A7SPY4 RNase H domain-containing protein9.8e-16198.6Show/hide
Query:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
        MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
Subjt:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN

Query:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
        ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
Subjt:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK

Query:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNL
        RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRR +  L
Subjt:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNL

A0A5A7TZU9 Ribonuclease H4.3e-14080.89Show/hide
Query:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
        ++LL  YKD+FAWSYKEMP LDPKVA+H LAIKP +RP+KQAQRRFRPELI QIE EVNKLIEA FIR+VKYPTWIANI+PV+KKNGQLRVCV F DLNN
Subjt:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN

Query:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
        ACPKD+FPL I EI++DAT GHE LSFMDGSSGYNQI+M L DEE TAFRTPKGIYCYKVMPFGLKN  ATYQRAMQ++F DMLHK+VECY+DDLVVKSK
Subjt:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK

Query:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF
        ++ DHLKDL++V DRLRKYQLRMNPL+C F VTSGKF+ FIVRHRGIE+D SKID IQKMP PK+LH+LR LQGRLAYIRRF+SNLAGRCQPF
Subjt:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF

A0A5D3DB95 RNase H domain-containing protein9.8e-16198.6Show/hide
Query:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
        MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
Subjt:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN

Query:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
        ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
Subjt:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK

Query:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNL
        RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRR +  L
Subjt:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNL

A0A5D3DYG9 Reverse transcriptase domain-containing protein3.1e-15490.1Show/hide
Query:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN
        MSLLTEYKDIFAWSYKEMP LDPKV +HHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEA FIR+VKYPTWIANI+PV+KKNGQLRVCV F DLNN
Subjt:  MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNN

Query:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK
        ACPKD+FPL ITEI+VDATTGHE LSFMDGSSGYNQI++ LSDEEMTAFRTPKGIYCYKVMPFGLKN  ATYQRAMQKVF DMLHKYVECY+DDLVVKSK
Subjt:  ACPKDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSK

Query:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF
        RRQDHLKDL+VVFDRLRKYQLRMNPL+C F +TSGKF+ FIVRHRGIEIDQSKID IQKMPRPKSLHDLRSLQGRLAYIRRF+SNLAGRCQPF
Subjt:  RRQDHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.0e-3027.68Show/hide
Query:  EYKDIFAWSYKE-MPRLDPKVAIHHLAIKPGYR-PIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACP
        E+KDI A +  E +P+    +       +  YR PI+       P  +  +  E+N+ +++  IR+ K       ++ V KK G LR+ V +  LN    
Subjt:  EYKDIFAWSYKE-MPRLDPKVAIHHLAIKPGYR-PIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACP

Query:  KDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQ
         + +PL + E ++    G  + + +D  S Y+ I++   DE   AFR P+G++ Y VMP+G+    A +Q  +  + G+    +V CY+DD+++ SK   
Subjt:  KDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQ

Query:  DHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP
        +H+K ++ V  +L+   L +N  +C F  +  KFI + +  +G    Q  ID + +  +PK+  +LR   G + Y+R+F+   +    P
Subjt:  DHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP

P0CT35 Transposon Tf2-2 polyprotein2.0e-3027.68Show/hide
Query:  EYKDIFAWSYKE-MPRLDPKVAIHHLAIKPGYR-PIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACP
        E+KDI A +  E +P+    +       +  YR PI+       P  +  +  E+N+ +++  IR+ K       ++ V KK G LR+ V +  LN    
Subjt:  EYKDIFAWSYKE-MPRLDPKVAIHHLAIKPGYR-PIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACP

Query:  KDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQ
         + +PL + E ++    G  + + +D  S Y+ I++   DE   AFR P+G++ Y VMP+G+    A +Q  +  + G+    +V CY+DD+++ SK   
Subjt:  KDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQ

Query:  DHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP
        +H+K ++ V  +L+   L +N  +C F  +  KFI + +  +G    Q  ID + +  +PK+  +LR   G + Y+R+F+   +    P
Subjt:  DHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP

P0CT41 Transposon Tf2-12 polyprotein2.0e-3027.68Show/hide
Query:  EYKDIFAWSYKE-MPRLDPKVAIHHLAIKPGYR-PIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACP
        E+KDI A +  E +P+    +       +  YR PI+       P  +  +  E+N+ +++  IR+ K       ++ V KK G LR+ V +  LN    
Subjt:  EYKDIFAWSYKE-MPRLDPKVAIHHLAIKPGYR-PIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACP

Query:  KDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQ
         + +PL + E ++    G  + + +D  S Y+ I++   DE   AFR P+G++ Y VMP+G+    A +Q  +  + G+    +V CY+DD+++ SK   
Subjt:  KDEFPLSITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQ

Query:  DHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP
        +H+K ++ V  +L+   L +N  +C F  +  KFI + +  +G    Q  ID + +  +PK+  +LR   G + Y+R+F+   +    P
Subjt:  DHLKDLQVVFDRLRKYQLRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein6.8e-3432.45Show/hide
Query:  HHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACPKDEFPLSITEIIVDATTGHEVLSF
        H + IKPG R  +        +   +I   V KL++ +FI   K P   + ++ V KK+G  R+CV +  LN A   D FPL   + ++      ++ + 
Subjt:  HHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACPKDEFPLSITEIIVDATTGHEVLSF

Query:  MDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQDHLKDLQVVFDRLRKYQLRMNPLE
        +D  SGY+QI M   D   TAF TP G Y Y VMPFGL N  +T+ R M   F D+  ++V  Y+DD+++ S+  ++H K L  V +RL+   L +   +
Subjt:  MDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQDHLKDLQVVFDRLRKYQLRMNPLE

Query:  CVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP
        C F+    +F+ + +  + I   Q K   I+  P PK++   +   G + Y RRF+ N +   QP
Subjt:  CVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP

Q99315 Transposon Ty3-G Gag-Pol polyprotein6.8e-3432.45Show/hide
Query:  HHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACPKDEFPLSITEIIVDATTGHEVLSF
        H + IKPG R  +        +   +I   V KL++ +FI   K P   + ++ V KK+G  R+CV +  LN A   D FPL   + ++      ++ + 
Subjt:  HHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACPKDEFPLSITEIIVDATTGHEVLSF

Query:  MDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQDHLKDLQVVFDRLRKYQLRMNPLE
        +D  SGY+QI M   D   TAF TP G Y Y VMPFGL N  +T+ R M   F D+  ++V  Y+DD+++ S+  ++H K L  V +RL+   L +   +
Subjt:  MDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQDHLKDLQVVFDRLRKYQLRMNPLE

Query:  CVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP
        C F+    +F+ + +  + I   Q K   I+  P PK++   +   G + Y RRF+ N +   QP
Subjt:  CVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTGCTTACAGAGTATAAGGACATTTTTGCTTGGTCATACAAAGAGATGCCAAGACTTGATCCAAAGGTAGCAATCCATCATCTTGCAATTAAACCAGGGTATCG
ACCGATTAAACAAGCACAACGACGTTTTCGACCAGAGCTTATTCCCCAGATCGAGGTTGAAGTCAACAAGTTGATTGAAGCAAGATTCATTCGCCAAGTCAAATATCCCA
CATGGATAGCAAATATTATCCCTGTCAAAAAAAAGAACGGGCAGCTTCGTGTTTGTGTAGGCTTTTGTGACCTGAATAATGCGTGCCCTAAAGATGAATTTCCTTTGTCC
ATCACAGAAATCATAGTTGATGCAACTACTGGACACGAGGTACTATCCTTTATGGATGGGTCGTCTGGATATAATCAAATACAAATGGTCCTTTCAGATGAAGAAATGAC
AGCTTTCAGGACCCCAAAGGGAATATATTGTTACAAGGTGATGCCCTTTGGATTAAAAAATATTAGTGCCACTTATCAACGTGCTATGCAAAAAGTGTTTGGTGATATGC
TACATAAGTATGTCGAGTGCTACATTGATGACCTTGTGGTCAAATCCAAGAGACGACAAGACCATTTGAAGGATCTACAAGTTGTGTTCGACCGCTTGCGAAAATATCAG
TTGAGGATGAATCCTCTCGAATGTGTGTTCAGTGTAACTTCAGGAAAGTTTATTGACTTTATTGTAAGGCATCGAGGGATTGAGATAGACCAGTCCAAGATTGATGTCAT
TCAGAAGATGCCAAGGCCAAAGAGTTTACATGACCTAAGAAGTCTCCAGGGACGATTGGCTTACATTCGAAGGTTCGTCTCCAACCTGGCTGGTCGGTGCCAACCTTTTT
AA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTGCTTACAGAGTATAAGGACATTTTTGCTTGGTCATACAAAGAGATGCCAAGACTTGATCCAAAGGTAGCAATCCATCATCTTGCAATTAAACCAGGGTATCG
ACCGATTAAACAAGCACAACGACGTTTTCGACCAGAGCTTATTCCCCAGATCGAGGTTGAAGTCAACAAGTTGATTGAAGCAAGATTCATTCGCCAAGTCAAATATCCCA
CATGGATAGCAAATATTATCCCTGTCAAAAAAAAGAACGGGCAGCTTCGTGTTTGTGTAGGCTTTTGTGACCTGAATAATGCGTGCCCTAAAGATGAATTTCCTTTGTCC
ATCACAGAAATCATAGTTGATGCAACTACTGGACACGAGGTACTATCCTTTATGGATGGGTCGTCTGGATATAATCAAATACAAATGGTCCTTTCAGATGAAGAAATGAC
AGCTTTCAGGACCCCAAAGGGAATATATTGTTACAAGGTGATGCCCTTTGGATTAAAAAATATTAGTGCCACTTATCAACGTGCTATGCAAAAAGTGTTTGGTGATATGC
TACATAAGTATGTCGAGTGCTACATTGATGACCTTGTGGTCAAATCCAAGAGACGACAAGACCATTTGAAGGATCTACAAGTTGTGTTCGACCGCTTGCGAAAATATCAG
TTGAGGATGAATCCTCTCGAATGTGTGTTCAGTGTAACTTCAGGAAAGTTTATTGACTTTATTGTAAGGCATCGAGGGATTGAGATAGACCAGTCCAAGATTGATGTCAT
TCAGAAGATGCCAAGGCCAAAGAGTTTACATGACCTAAGAAGTCTCCAGGGACGATTGGCTTACATTCGAAGGTTCGTCTCCAACCTGGCTGGTCGGTGCCAACCTTTTT
AA
Protein sequenceShow/hide protein sequence
MSLLTEYKDIFAWSYKEMPRLDPKVAIHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNKLIEARFIRQVKYPTWIANIIPVKKKNGQLRVCVGFCDLNNACPKDEFPLS
ITEIIVDATTGHEVLSFMDGSSGYNQIQMVLSDEEMTAFRTPKGIYCYKVMPFGLKNISATYQRAMQKVFGDMLHKYVECYIDDLVVKSKRRQDHLKDLQVVFDRLRKYQ
LRMNPLECVFSVTSGKFIDFIVRHRGIEIDQSKIDVIQKMPRPKSLHDLRSLQGRLAYIRRFVSNLAGRCQPF