; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0321361 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321361
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCMiso1.1chr12:8418081..8421543
RNA-Seq ExpressionCmc12g0321361
SyntenyCmc12g0321361
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032594.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]5.6e-17092.51Show/hide
Query:  NRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMV
        NRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMV
Subjt:  NRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMV

Query:  LLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYT
        LLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYT
Subjt:  LLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYT

Query:  YNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFGNIEEALTLLKEMKLKKIC
        YNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV                          ALIESFGRFGNIEEALTLLKEMKLKKIC
Subjt:  YNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFGNIEEALTLLKEMKLKKIC

Query:  PSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR
        PSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR
Subjt:  PSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR

XP_008462480.1 PREDICTED: pentatricopeptide repeat-containing protein At1g11900 isoform X1 [Cucumis melo]2.0e-18092.88Show/hide
Query:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
        MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
Subjt:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK

Query:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
        SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
Subjt:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA

Query:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG
        FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV                          ALIESFGRFG
Subjt:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG

Query:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR
        NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR
Subjt:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR

XP_008462492.1 PREDICTED: pentatricopeptide repeat-containing protein At1g11900 isoform X2 [Cucumis melo]4.5e-14399.62Show/hide
Query:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
        MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
Subjt:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK

Query:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
        SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
Subjt:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA

Query:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV
        FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRK+
Subjt:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV

XP_011654081.1 pentatricopeptide repeat-containing protein At1g11900 isoform X1 [Cucumis sativus]4.9e-15079.12Show/hide
Query:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
        MSLY L I+RN LHYSYANRIAS PVGNSQIWPLYAIKC SHQSS T I P+EVKVGDE LNQIIAP ENAS C HEI+DACIDKIC LGHLAAAA LLK
Subjt:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK

Query:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
        SLCNEK+   SS+AYDMVLLAASERGDTPLLC+VFKVA++SCKSLSSASYMSFARAFTKTND SKLLECVKEI+E+TSQ C VINRIIFAFS+ REIDKA
Subjt:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA

Query:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG
        FQIFNQMKCLSCTPDLYTYNI+LDM+GRAGRV+EILH+FVSMK+EGIAPDIVSYNTLINSLRKV                          ALIES+GRFG
Subjt:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG

Query:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRK
        N+EEALTLLKEMKL  I PSSYIY+SLI NS  M KVELAT+LLNEMKLS+S+LARPEDFKRRK
Subjt:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRK

XP_038893594.1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g11900 [Benincasa hispida]6.2e-14576.65Show/hide
Query:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
        MS+Y+L ++RNLLH SYAN IAS+PVGNSQ WPLYAI+  SHQSSSTNI PDEVKVGDEVLNQIIAPRENAS CSHE  DACIDK+C +GHLAAAAQLLK
Subjt:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK

Query:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
        SLC+ KI L+SSKAYDMVLLAASE GDT LL QVFK ++VSCKSLSS SY SFA AFT+TNDS+KLLE VKEI+E+T  NC VINRIIFAFSKCREIDKA
Subjt:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA

Query:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG
         QIFNQMK LSC PDLYTYNI+LDMLGRAGRV+EILHLFVSMK++GIAPDIVSYNTLINS RKV                          ALIESFGR G
Subjt:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG

Query:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRK
        NIEEA TLL+EMKLK ICPSSYIYKSLI NS KMGKVELA NLL EMKLS+SKLA P+DFKRRK
Subjt:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRK

TrEMBL top hitse value%identityAlignment
A0A0A0LXZ6 Uncharacterized protein2.4e-15079.12Show/hide
Query:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
        MSLY L I+RN LHYSYANRIAS PVGNSQIWPLYAIKC SHQSS T I P+EVKVGDE LNQIIAP ENAS C HEI+DACIDKIC LGHLAAAA LLK
Subjt:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK

Query:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
        SLCNEK+   SS+AYDMVLLAASERGDTPLLC+VFKVA++SCKSLSSASYMSFARAFTKTND SKLLECVKEI+E+TSQ C VINRIIFAFS+ REIDKA
Subjt:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA

Query:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG
        FQIFNQMKCLSCTPDLYTYNI+LDM+GRAGRV+EILH+FVSMK+EGIAPDIVSYNTLINSLRKV                          ALIES+GRFG
Subjt:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG

Query:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRK
        N+EEALTLLKEMKL  I PSSYIY+SLI NS  M KVELAT+LLNEMKLS+S+LARPEDFKRRK
Subjt:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRK

A0A1S3CH34 pentatricopeptide repeat-containing protein At1g11900 isoform X22.2e-14399.62Show/hide
Query:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
        MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
Subjt:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK

Query:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
        SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
Subjt:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA

Query:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV
        FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRK+
Subjt:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV

A0A1S3CIJ8 pentatricopeptide repeat-containing protein At1g11900 isoform X19.9e-18192.88Show/hide
Query:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
        MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK
Subjt:  MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLK

Query:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
        SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA
Subjt:  SLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKA

Query:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG
        FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV                          ALIESFGRFG
Subjt:  FQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFG

Query:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR
        NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR
Subjt:  NIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR

A0A5D3DB98 Pentatricopeptide repeat-containing protein2.7e-17092.51Show/hide
Query:  NRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMV
        NRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMV
Subjt:  NRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMV

Query:  LLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYT
        LLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYT
Subjt:  LLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYT

Query:  YNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFGNIEEALTLLKEMKLKKIC
        YNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV                          ALIESFGRFGNIEEALTLLKEMKLKKIC
Subjt:  YNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFGNIEEALTLLKEMKLKKIC

Query:  PSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR
        PSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR
Subjt:  PSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR

A0A6J1HYS7 pentatricopeptide repeat-containing protein At1g119008.8e-12970.91Show/hide
Query:  YQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLC
        + L   RN+LHYSY N I SIPVGN Q W LYAI+ F HQSS+ NISPDE KV DEVLNQI A RENAS CSHE  D CIDK+C  G+L AAAQLLKSLC
Subjt:  YQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLC

Query:  NEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKAFQI
        + KISL+SSKAYDMVLLAASERGDT LLCQVFK ++VS K LSS SYM+FA+AF +T+DSSKLLE VKEI+E+T  N  VINRIIFAFS+CREIDKA QI
Subjt:  NEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKAFQI

Query:  FNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFGNIE
        FNQMK LS  PDLYTYNI+LD LGRAGR++EILH+FVSMK++GIAPDIVSYNTLINSLRKV                          ALIESFGR GN+E
Subjt:  FNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKV--------------------------ALIESFGRFGNIE

Query:  EALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRK
        EALTLL+EMKLK I PSSYIYKSLI+NS K+GKVELA NLL EMKLS SKLA P+DFKR++
Subjt:  EALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRK

SwissProt top hitse value%identityAlignment
O65567 Pentatricopeptide repeat-containing protein At4g30825, chloroplastic1.3e-1530.32Show/hide
Query:  SYMSFARAFTKTNDSSKLLECVKEI-VEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGI
        SY +   A+ K  D + +   +K +  +  S +    N ++ A+ K ++++K   I  +MK  +  PD YTYNI++++ G  G ++E+  +   +K+ G+
Subjt:  SYMSFARAFTKTNDSSKLLECVKEI-VEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGI

Query:  APDIVSYNTLINSLRKVALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLI
         PD+ SYNT         LI+++G  G +EEA+ L+KEM+ + I P    Y +L+
Subjt:  APDIVSYNTLINSLRKVALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLI

O80958 Pentatricopeptide repeat-containing protein At2g39230, mitochondrial1.3e-1522.95Show/hide
Query:  EVLNQIIAPRENASN--CSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARA
        +V+NQ+     NASN   +  I +  I+ +C +G  + A ++L++L  EK    S  +Y+ ++    + GDT    + ++    + KS +  ++ S    
Subjt:  EVLNQIIAPRENASN--CSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARA

Query:  FTKTNDSSKLLECVKEIVEVTSQ-NCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYN
        F K+N     LE   E+  +  + +      +I  F K  ++  A+ +F+++  L   P++  YN ++      G+++  + L+  M ++GI+ D+ +Y 
Subjt:  FTKTNDSSKLLECVKEIVEVTSQ-NCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYN

Query:  TLINSLRK--------------------------VALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEM
        T+I+ L K                          + L+    + G   +A  +L+EMK K + P+  +Y ++IA   + G +  A  L +EM
Subjt:  TLINSLRK--------------------------VALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEM

Q5BIV3 Pentatricopeptide repeat-containing protein At1g119001.3e-4138.22Show/hide
Query:  DEVLNQIIAPRENASNCSHEI-VDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVV--SCKSLSSASYMSFA
        +E+L +I+   E+ S    +I     ++K    G+L+ A  LL+SL  + I L  S  +  +L AA E  D  L C+VF+  ++    + LSS  Y++ A
Subjt:  DEVLNQIIAPRENASNCSHEI-VDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVV--SCKSLSSASYMSFA

Query:  RAFTKTNDSSKLLECVKEIVEVT-SQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDE-GIAPDIV
        RAF  T+D + L   +KEI E +      V+NRIIFAF++ R+IDK   I  +MK   C PD+ TYN VLD+LGRAG VNEIL +  +MK++  ++ +I+
Subjt:  RAFTKTNDSSKLLECVKEIVEVT-SQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDE-GIAPDIV

Query:  SYNTLINSLRK--------------------------VALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSES
        +YNT++N +RK                           A+I+S GR GN++E+L L  EMK ++I PS Y+Y++LI   KK G  + A  L +E+K + S
Subjt:  SYNTLINSLRK--------------------------VALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSES

Query:  -KLARPEDFKRRKR
          LA P+DFKR  R
Subjt:  -KLARPEDFKRRKR

Q9SZ52 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic1.4e-1940.28Show/hide
Query:  NCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKVALIESFGRFGNIEEA
        NC++ N +I  F K  E D A  +F +M      PDL TY++++D L   GRV+E LH F  +K+ G+ PD+V YN +IN L         G+   +EEA
Subjt:  NCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKVALIESFGRFGNIEEA

Query:  LTLLKEMKLKK-ICPSSYIYKSLIANSKKMGKVELATNLLNEMK
        L L  EMK  + I P  Y Y SLI N    G VE A  + NE++
Subjt:  LTLLKEMKLKK-ICPSSYIYKSLIANSKKMGKVELATNLLNEMK

Q9ZU27 Pentatricopeptide repeat-containing protein At1g51965, mitochondrial2.5e-1631.03Show/hide
Query:  SYMSFARAFTKTNDSSKLLECVKEIVEV-TSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGI
        SYMS   +      + + +E + +I E     +  + N +  A  K ++I     +F +MK    +PD++TYNI++   GR G V+E +++F  ++    
Subjt:  SYMSFARAFTKTNDSSKLLECVKEIVEV-TSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGI

Query:  APDIVSYNTLINSLRKVALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEM
         PDI+SYN+LIN L         G+ G+++EA    KEM+ K + P    Y +L+    K  +VE+A +L  EM
Subjt:  APDIVSYNTLINSLRKVALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEM

Arabidopsis top hitse value%identityAlignment
AT1G11900.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.5e-4338.22Show/hide
Query:  DEVLNQIIAPRENASNCSHEI-VDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVV--SCKSLSSASYMSFA
        +E+L +I+   E+ S    +I     ++K    G+L+ A  LL+SL  + I L  S  +  +L AA E  D  L C+VF+  ++    + LSS  Y++ A
Subjt:  DEVLNQIIAPRENASNCSHEI-VDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVV--SCKSLSSASYMSFA

Query:  RAFTKTNDSSKLLECVKEIVEVT-SQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDE-GIAPDIV
        RAF  T+D + L   +KEI E +      V+NRIIFAF++ R+IDK   I  +MK   C PD+ TYN VLD+LGRAG VNEIL +  +MK++  ++ +I+
Subjt:  RAFTKTNDSSKLLECVKEIVEVT-SQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDE-GIAPDIV

Query:  SYNTLINSLRK--------------------------VALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSES
        +YNT++N +RK                           A+I+S GR GN++E+L L  EMK ++I PS Y+Y++LI   KK G  + A  L +E+K + S
Subjt:  SYNTLINSLRK--------------------------VALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSES

Query:  -KLARPEDFKRRKR
          LA P+DFKR  R
Subjt:  -KLARPEDFKRRKR

AT1G51965.1 ABA Overly-Sensitive 51.8e-1731.03Show/hide
Query:  SYMSFARAFTKTNDSSKLLECVKEIVEV-TSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGI
        SYMS   +      + + +E + +I E     +  + N +  A  K ++I     +F +MK    +PD++TYNI++   GR G V+E +++F  ++    
Subjt:  SYMSFARAFTKTNDSSKLLECVKEIVEV-TSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGI

Query:  APDIVSYNTLINSLRKVALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEM
         PDI+SYN+LIN L         G+ G+++EA    KEM+ K + P    Y +L+    K  +VE+A +L  EM
Subjt:  APDIVSYNTLINSLRKVALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEM

AT2G39230.1 LATERAL ORGAN JUNCTION9.0e-1722.95Show/hide
Query:  EVLNQIIAPRENASN--CSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARA
        +V+NQ+     NASN   +  I +  I+ +C +G  + A ++L++L  EK    S  +Y+ ++    + GDT    + ++    + KS +  ++ S    
Subjt:  EVLNQIIAPRENASN--CSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARA

Query:  FTKTNDSSKLLECVKEIVEVTSQ-NCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYN
        F K+N     LE   E+  +  + +      +I  F K  ++  A+ +F+++  L   P++  YN ++      G+++  + L+  M ++GI+ D+ +Y 
Subjt:  FTKTNDSSKLLECVKEIVEVTSQ-NCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYN

Query:  TLINSLRK--------------------------VALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEM
        T+I+ L K                          + L+    + G   +A  +L+EMK K + P+  +Y ++IA   + G +  A  L +EM
Subjt:  TLINSLRK--------------------------VALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEM

AT4G30825.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.0e-1730.32Show/hide
Query:  SYMSFARAFTKTNDSSKLLECVKEI-VEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGI
        SY +   A+ K  D + +   +K +  +  S +    N ++ A+ K ++++K   I  +MK  +  PD YTYNI++++ G  G ++E+  +   +K+ G+
Subjt:  SYMSFARAFTKTNDSSKLLECVKEI-VEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGI

Query:  APDIVSYNTLINSLRKVALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLI
         PD+ SYNT         LI+++G  G +EEA+ L+KEM+ + I P    Y +L+
Subjt:  APDIVSYNTLINSLRKVALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLI

AT4G31850.1 proton gradient regulation 31.0e-2040.28Show/hide
Query:  NCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKVALIESFGRFGNIEEA
        NC++ N +I  F K  E D A  +F +M      PDL TY++++D L   GRV+E LH F  +K+ G+ PD+V YN +IN L         G+   +EEA
Subjt:  NCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKVALIESFGRFGNIEEA

Query:  LTLLKEMKLKK-ICPSSYIYKSLIANSKKMGKVELATNLLNEMK
        L L  EMK  + I P  Y Y SLI N    G VE A  + NE++
Subjt:  LTLLKEMKLKK-ICPSSYIYKSLIANSKKMGKVELATNLLNEMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTTTACCAACTTACTATCTATAGGAATCTTCTGCACTACTCGTATGCTAATAGAATTGCATCTATCCCAGTTGGTAACTCTCAAATCTGGCCGCTTTATGCCAT
CAAATGCTTCAGCCATCAGTCATCTAGTACAAATATCTCTCCTGATGAAGTGAAAGTGGGGGATGAAGTCTTGAATCAGATTATTGCTCCGAGGGAAAATGCCTCAAATT
GTAGCCATGAGATCGTTGATGCTTGCATTGATAAGATTTGTGGACTGGGACATCTTGCAGCTGCCGCTCAATTACTTAAATCATTGTGCAATGAGAAAATATCTCTTAAC
TCTTCCAAGGCATATGATATGGTTTTGCTTGCAGCCAGTGAAAGGGGAGACACTCCCCTTTTATGTCAAGTTTTTAAAGTTGCCGTAGTTTCATGTAAATCATTGAGTTC
GGCTTCTTACATGAGTTTTGCCAGGGCCTTTACCAAGACAAATGATAGTAGCAAGCTGTTGGAATGTGTCAAAGAAATAGTTGAGGTTACCTCTCAAAACTGCTCAGTTA
TAAACAGAATTATCTTTGCCTTCTCCAAGTGTAGGGAGATCGATAAAGCCTTTCAGATATTTAATCAGATGAAGTGTCTGTCATGCACACCAGATCTTTATACATACAAC
ATTGTTTTGGATATGCTAGGTCGTGCAGGTCGTGTGAATGAAATTCTTCATTTATTTGTTTCCATGAAAGATGAAGGCATTGCTCCAGATATTGTGTCTTATAATACACT
GATAAATAGCTTAAGGAAGGTGGCTTTGATAGAGAGTTTTGGTCGATTTGGAAACATCGAGGAAGCTTTGACACTCCTCAAAGAGATGAAGCTTAAGAAGATCTGTCCTT
CGAGCTATATCTACAAGTCCCTTATTGCAAATTCAAAGAAGATGGGGAAGGTGGAATTGGCTACGAACCTTCTCAACGAAATGAAATTAAGTGAATCAAAACTTGCTCGT
CCGGAGGATTTCAAACGAAGAAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATACAATTTCCCTTAAATAAATATATTTCTCTTCTTCTTCCTCTGCCTCAGCCGAATTCCGCTTCCCCAACCCTCTTCTATCTCTCTTCACGTCTCAGCCGCCGCACGCC
GCCGCGTCTCCCAGTCAGCCGTTCCTCCTCGCGTTGTCGCTTATCTGACACCCAGACCGAGCGGAGCCGACGTCTCCTTCGCTGCCGTTGGAGTTCGTCGCGCCGCCGTG
TGGTTGTTTCACACCCGCCGTCCGAAACCTTCGCCGCTGCGACAGCGTTGCCCATCAGCCGCCGGCGGTCCTGTCAACCACTGAAGTTATGTACAGAGTTTGGGAATGGG
TTTTCTAGTAATCTTAGCATTCATCTTCGTCGAGTTAGGGCCGATTTCACGATAGGCAGACGCTGAGCGGAAAAACAAGAAGCAAACCCTGGAATTTTGGAACGAAGAAG
AATCGCAAAGCAGTGTCGTGGTTTTAGGGTTTAGGGTTTAGAGTGCTTTAACCTTCTTCCACATTTCAGCTTATGGTTCGAACCACTTCCCCATTTACTTGCATTTTCGA
TTTCAGTTCTGGCCGTTTATGTCGCTTTACCAACTTACTATCTATAGGAATCTTCTGCACTACTCGTATGCTAATAGAATTGCATCTATCCCAGTTGGTAACTCTCAAAT
CTGGCCGCTTTATGCCATCAAATGCTTCAGCCATCAGTCATCTAGTACAAATATCTCTCCTGATGAAGTGAAAGTGGGGGATGAAGTCTTGAATCAGATTATTGCTCCGA
GGGAAAATGCCTCAAATTGTAGCCATGAGATCGTTGATGCTTGCATTGATAAGATTTGTGGACTGGGACATCTTGCAGCTGCCGCTCAATTACTTAAATCATTGTGCAAT
GAGAAAATATCTCTTAACTCTTCCAAGGCATATGATATGGTTTTGCTTGCAGCCAGTGAAAGGGGAGACACTCCCCTTTTATGTCAAGTTTTTAAAGTTGCCGTAGTTTC
ATGTAAATCATTGAGTTCGGCTTCTTACATGAGTTTTGCCAGGGCCTTTACCAAGACAAATGATAGTAGCAAGCTGTTGGAATGTGTCAAAGAAATAGTTGAGGTTACCT
CTCAAAACTGCTCAGTTATAAACAGAATTATCTTTGCCTTCTCCAAGTGTAGGGAGATCGATAAAGCCTTTCAGATATTTAATCAGATGAAGTGTCTGTCATGCACACCA
GATCTTTATACATACAACATTGTTTTGGATATGCTAGGTCGTGCAGGTCGTGTGAATGAAATTCTTCATTTATTTGTTTCCATGAAAGATGAAGGCATTGCTCCAGATAT
TGTGTCTTATAATACACTGATAAATAGCTTAAGGAAGGTGGCTTTGATAGAGAGTTTTGGTCGATTTGGAAACATCGAGGAAGCTTTGACACTCCTCAAAGAGATGAAGC
TTAAGAAGATCTGTCCTTCGAGCTATATCTACAAGTCCCTTATTGCAAATTCAAAGAAGATGGGGAAGGTGGAATTGGCTACGAACCTTCTCAACGAAATGAAATTAAGT
GAATCAAAACTTGCTCGTCCGGAGGATTTCAAACGAAGAAAAAGGTAACCAATTACAAGGTTTCAAAGCAGACTTTGAGATTGATAAGCCTGTGAATGTCGTGGCTTTAA
TCTTCAAAGTGAGATCTGCCTAAGTGACTGCATCTACAGGTGCGTATGTGTAACTGACGTTTGTTGGGAGAGAGAGAACTCAAGATGTGGAGCAGTTTTCAGAATCTTTG
CAAGAACTCAGAAAAATGTAATTCAAGAAATTCACTGCGAGGAAGAAAATGATGAACAAAAATCGGGGCTAACAAAAATTCAGAAAAAGAAGACGATCAAAAGTCTTGAT
GCTGAAGTGAAAATCATCGGTGAAGATAAGCATCTAGGGATTCAATTTGAATAATATGATAAGTTGATTAAAGAAGAAATAACTTGTGGGAACGGAATCGATGAAATGTT
GTTGAATTGGAGATTATGGGACTCAAATCAGAAAGGAAATCAATGTCGAAAATAGATGAAAGTGATCCAACCCATGAATCTCTCTACAGTATAAGAGATGTCAAAAATCA
AAGTCGTTGAAGATTAGGAGATGAGAACGTACAGACAAATTTATTTCAATAAACTTGAGAGTCTAATTAAAGTTGATTGCAAAATAACATGGAAGGTGCCATGTTTGGAA
TTTAAAAATGCATATGTTATATGGCACGAGGCACGAGGGCAAGGTTGAGTATTATGGAAGACTTAAAAGGATATGAAATTGTTTGGTCCTTATACTTTAAGGGTGGGTTT
GGGGAAGGGAAAGAGTTATGGGGGAAAAGGATTATAATAATCCTAGGATTATGATAATCCTAGTGTTATGATAATATGTGTTTGGGGGAAAGAATATAAAAGGTAGTATT
ATAATAGTATGTGTTTG
Protein sequenceShow/hide protein sequence
MSLYQLTIYRNLLHYSYANRIASIPVGNSQIWPLYAIKCFSHQSSSTNISPDEVKVGDEVLNQIIAPRENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLN
SSKAYDMVLLAASERGDTPLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRIIFAFSKCREIDKAFQIFNQMKCLSCTPDLYTYN
IVLDMLGRAGRVNEILHLFVSMKDEGIAPDIVSYNTLINSLRKVALIESFGRFGNIEEALTLLKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLAR
PEDFKRRKR