; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0321431 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321431
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr12:8480926..8481855
RNA-Seq ExpressionCmc12g0321431
SyntenyCmc12g0321431
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5956480.1 hypothetical protein HYC85_003705 [Camellia sinensis]3.2e-11666.34Show/hide
Query:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEP---QNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI
        MESRN  FFE+IFP +           FD + SE     +  +D++   +E RR+KR R SKSFGPDF+TY++ENEPQTF EA++SPE+P WKEA+ SEI
Subjt:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEP---QNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI

Query:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE
        +SI+ NHTWELVDLP    PLGCKWIFKRKMK +GSIDKYKARLV KGY+Q+EGLDYFDTYSP+TRITSIR++IAI+AL   EI QMDVKTTFLNG+L+E
Subjt:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE

Query:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEM
        EIY++QPEGF +PGQ  KV KL++SLYGLKQAPKQWH+KFD+VM++NGF+INECDKC+YVK     +V++CLYVDDMLIIGSN  +IKTTK++L +KF++
Subjt:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEM

Query:  KDMDVADVI
        KDM +ADVI
Subjt:  KDMDVADVI

PSR86206.1 Endonuclease [Actinidia chinensis var. chinensis]2.5e-11667.32Show/hide
Query:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI
        MESRN +FFE+IFP++   ++   KR+        Q++  DE   + +LRRSKR RIS SFGPDF+TY+LE+EPQT+KEA+S PE P WKEA+ SEIESI
Subjt:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI

Query:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY
        + NHTWELV+LP  S PLG KWIFKRKMK DGSIDKYKARLV KGY+Q+EGLDYFDTYSPV+RITSIRM+IAI+AL   EIHQMDVKT FLNG+LDEEIY
Subjt:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY

Query:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM
        ++QPEGF +PG+E KV +L+RSLYGLKQAPKQWH+KFD+V++++GFKINECDKCVYVK     +V++CLY+DDM+I+GSN  +IK+TK +L +KF+MKDM
Subjt:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM

Query:  DVADVI
         +ADVI
Subjt:  DVADVI

PSS35063.1 Endonuclease [Actinidia chinensis var. chinensis]2.5e-11667.32Show/hide
Query:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI
        MESRN +FFE+IFP++   ++   KR+        Q++  DE   + +LRRSKR RIS SFGPDF+TY+LE+EPQT+KEA+S PE P WKEA+ SEIESI
Subjt:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI

Query:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY
        + NHTWELV+LP  S PLG KWIFKRKMK DGSIDKYKARLV KGY+Q+EGLDYFDTYSPV+RITSIRM+IAI+AL   EIHQMDVKT FLNG+LDEEIY
Subjt:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY

Query:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM
        ++QPEGF +PG+E KV +L+RSLYGLKQAPKQWH+KFD+V++++GFKINECDKCVYVK     +V++CLY+DDM+I+GSN  +IK+TK +L +KF+MKDM
Subjt:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM

Query:  DVADVI
         +ADVI
Subjt:  DVADVI

RVW67328.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.1e-11571.78Show/hide
Query:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQ---NRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI
        +ESRN  FFE IFP+    +   QKR+ D      Q   N+ + E   DE+ RR KR R S SFGPDF+TYLLEN+PQTFKEAMSSPEA YWKEA+NSEI
Subjt:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQ---NRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI

Query:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE
        ESI+ NHTWELVDLP  +  LGCKWIFK+KMK DGSIDKYKARLVAKGYKQ+EGLDYFDTYSPV+RITSIRMLIAI+A++  +IHQMDVKTTFLNGELDE
Subjt:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE

Query:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINII
        EIY+ QPEGF++PGQE KV KL++SLYGLKQAPKQWH+KFD+ M++NGFKINECDKC+YVK+ Q  +V+VCLYVDDMLIIGS+ N+I
Subjt:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINII

RVW67960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]9.4e-12470.87Show/hide
Query:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQ---NRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI
        +ESRN  FFE IFP+    +   QKR+ D      Q   N+ + E   D++LRR KR R S SFGPDF+TYLLEN+PQTFKEAMSSPEA YWKEA+NSEI
Subjt:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQ---NRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI

Query:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE
        ESI+ NHTWELVDLP  +  LGCKWIFK+KMK +GSIDKYKARLVAKGYKQ+EGLDYFDTYSPV++ITSIRMLIAI+A++  EIHQMDVKT FLNGELDE
Subjt:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE

Query:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEM
        EIY+ QPEGF++PGQE KV KL++SLYGLKQAPKQWH+KFD+ M++NGFKINECDKCVYVK+ Q  +V+VCLYVDDMLIIGS+ N+IK TKQML+++F+M
Subjt:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEM

Query:  KDMDVADVI
        KD+ VAD+I
Subjt:  KDMDVADVI

TrEMBL top hitse value%identityAlignment
A0A2N9FGP9 Integrase catalytic domain-containing protein9.5e-12270.92Show/hide
Query:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI
        +ESRNV+FFE IFP K T +    KR+ +S +S   ++   E   + E RRSKR + SK+FGPDF+T++LE+EPQ+FKEAMS PEAP WKEAVNSEIESI
Subjt:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI

Query:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY
        + NHTWELVDLP    PLG KWIFKRKMK DGSIDKYKARLV KGYKQ+EG+DYFDTYSPVTRITSIRMLIAI+AL+  EIHQMDVKT FLNGELDEEIY
Subjt:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY

Query:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM
        ++QPEGF+ PG+E KV +L++SLYGLKQAPKQWH+KFD+ MM+NGF+INECDKCVYVK+  + +V+VCLYVDDMLI+GSN +IIK TK+ML +KF+MKD+
Subjt:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM

Query:  DVADVI
         VADVI
Subjt:  DVADVI

A0A2N9HT58 Integrase catalytic domain-containing protein8.9e-12069.61Show/hide
Query:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI
        +ESRN +FFE IFP K + +    KR+ +S +S   ++   +   + E RRSKR + SK+FGPDF+T++LE+EPQ+FKEAMS PEAP WKEAVNSEIESI
Subjt:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI

Query:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY
        + NHTWELVDLP    PLG KWIFKRKMK DGSIDKYKARLV KGYKQ+EG+DYFDTYSPVTRITSIRMLIAI+AL+  EIHQMDVKT FLNGELDEEIY
Subjt:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY

Query:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM
        ++QPEGF+ PG+E KV +L++SLYGLKQAPKQWH+KFD+ MM+NGF+INECDKCVYVK+  + +V+VCLYVDDMLI+GSN +IIK TK+ML +KF+MKD+
Subjt:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM

Query:  DVADVI
         VA+VI
Subjt:  DVADVI

A0A2N9IGG8 Integrase catalytic domain-containing protein1.2e-11969.9Show/hide
Query:  MESRNVTFFENIFPHKMTCKA---RLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI
        +ESRN +FFE IFP K T +       KR+ +S +S   ++   E   + E RRSKR + SK+FGPDF+T++LE+EPQ+FKEAMS PEAP WKEAVNSEI
Subjt:  MESRNVTFFENIFPHKMTCKA---RLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI

Query:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE
        ESI+ NHTWELVDLP    PLG KWIFKRKMK DGSIDKYKARLV KGYKQ+EG+DYFDTYSPVTRITSIRMLIAI+AL+  EIHQMDVKT FLNGELDE
Subjt:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE

Query:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEM
        EIY++QPEGF+ PG+E KV +L++SLYGLKQAPKQWH+KFD+ MM+NGF+INECDKCVYVK+  + +V+VCLYVDDMLI+GSN +IIK TK+ML +KF+M
Subjt:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEM

Query:  KDMDVADVI
        KD+ VADVI
Subjt:  KDMDVADVI

A0A2N9J5F7 Integrase catalytic domain-containing protein3.6e-12170.59Show/hide
Query:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI
        +ESRN +FFE IFP K T +    KR+ +S +S   ++   E   + E RRSKR + SK+FGPDF+T++LE+EPQ+FKEAMS PEAP WKEAVNSEIESI
Subjt:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESI

Query:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY
        + NHTWELVDLP    PLG KWIFKRKMK DGSIDKYKARLV KGYKQ+EG+DYFDTYSPVTRITSIRMLIAI+AL+  EIHQMDVKT FLNGELDEEIY
Subjt:  MHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIY

Query:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM
        ++QPEGF+ PG+E KV +L++SLYGLKQAPKQWH+KFD+ MM+NGF+INECDKCVYVK+  + +V+VCLYVDDMLI+GSN +IIK TK+ML +KF+MKD+
Subjt:  IQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM

Query:  DVADVI
         VADVI
Subjt:  DVADVI

A0A438G6X1 Retrovirus-related Pol polyprotein from transposon TNT 1-944.5e-12470.87Show/hide
Query:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQ---NRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI
        +ESRN  FFE IFP+    +   QKR+ D      Q   N+ + E   D++LRR KR R S SFGPDF+TYLLEN+PQTFKEAMSSPEA YWKEA+NSEI
Subjt:  MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQ---NRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEI

Query:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE
        ESI+ NHTWELVDLP  +  LGCKWIFK+KMK +GSIDKYKARLVAKGYKQ+EGLDYFDTYSPV++ITSIRMLIAI+A++  EIHQMDVKT FLNGELDE
Subjt:  ESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDE

Query:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEM
        EIY+ QPEGF++PGQE KV KL++SLYGLKQAPKQWH+KFD+ M++NGFKINECDKCVYVK+ Q  +V+VCLYVDDMLIIGS+ N+IK TKQML+++F+M
Subjt:  EIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEM

Query:  KDMDVADVI
        KD+ VAD+I
Subjt:  KDMDVADVI

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.1e-4136.17Show/hide
Query:  LLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIR
        +  + P +F E     +   W+EA+N+E+ +   N+TW +   P     +  +W+F  K    G+  +YKARLVA+G+ Q+  +DY +T++PV RI+S R
Subjt:  LLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIR

Query:  MLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYV--KSNQNDHVM
         ++++   +  ++HQMDVKT FLNG L EEIY++ P+G +S   +N V KL +++YGLKQA + W + F+  +    F  +  D+C+Y+  K N N+++ 
Subjt:  MLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYV--KSNQNDHVM

Query:  VCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDMD
        V LYVDD++I   ++  +   K+ L  KF M D++
Subjt:  VCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDMD

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-5942.75Show/hide
Query:  EPQNRPNDELNKDEELRRSKRMRISKSFGP--DFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTD
        E    P     + + LRRS+R R+     P  ++V    + EP++ KE +S PE     +A+  E+ES+  N T++LV+LP    PL CKW+FK K   D
Subjt:  EPQNRPNDELNKDEELRRSKRMRISKSFGP--DFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTD

Query:  GSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPK
          + +YKARLV KG++Q++G+D+ + +SPV ++TSIR +++++A    E+ Q+DVKT FL+G+L+EEIY++QPEGF   G+++ V KL +SLYGLKQAP+
Subjt:  GSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPK

Query:  QWHKKFDSVMMANGFKINECDKCVYVKS-NQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDMDVADVI
        QW+ KFDS M +  +     D CVY K  ++N+ +++ LYVDDMLI+G +  +I   K  L+  F+MKD+  A  I
Subjt:  QWHKKFDSVMMANGFKINECDKCVYVKS-NQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDMDVADVI

P92520 Uncharacterized mitochondrial protein AtMg008202.0e-2040.37Show/hide
Query:  VTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRIT
        +T  ++ EP++   A+  P    W +A+  E++++  N TW LV  P+    LGCKW+FK K+ +DG++D+ KARLVAKG+ Q+EG+ + +TYSPV R  
Subjt:  VTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRIT

Query:  SIRMLIAIS
        +IR ++ ++
Subjt:  SIRMLIAIS

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.7e-4840Show/hide
Query:  VTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELV-DLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRI
        V+   E+EP+T  +A+       W+ A+ SEI + + NHTW+LV   P   T +GC+WIF +K  +DGS+++YKARLVAKGY Q+ GLDY +T+SPV + 
Subjt:  VTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELV-DLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRI

Query:  TSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDH
        TSIR+++ ++    + I Q+DV   FL G L +++Y+ QP GF+   + N V KL ++LYGLKQAP+ W+ +  + ++  GF  +  D  ++V       
Subjt:  TSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDH

Query:  VMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKD
        V + +YVDD+LI G++  ++  T   L+ +F +KD
Subjt:  VMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKD

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.5e-4740.08Show/hide
Query:  FVTYLLEN-EPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLES-TPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVT
        + T L  N EP+T  +AM       W++A+ SEI + + NHTW+LV  P  S T +GC+WIF +K  +DGS+++YKARLVAKGY Q+ GLDY +T+SPV 
Subjt:  FVTYLLEN-EPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLES-TPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVT

Query:  RITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQN
        + TSIR+++ ++    + I Q+DV   FL G L +E+Y+ QP GFV   + + V +L +++YGLKQAP+ W+ +  + ++  GF  +  D  ++V     
Subjt:  RITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQENKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQN

Query:  DHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKD
          + + +YVDD+LI G++  ++K T   L+ +F +K+
Subjt:  DHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKD

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.0e-5239.36Show/hide
Query:  RISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYF
        ++S  +    V      EP T+ EA    E   W  A++ EI ++   HTWE+  LP    P+GCKW++K K  +DG+I++YKARLVAKGY QQEG+D+ 
Subjt:  RISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYF

Query:  DTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQE----NKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINEC
        +T+SPV ++TS+++++AISA++ F +HQ+D+   FLNG+LDEEIY++ P G+ +   +    N V  L +S+YGLKQA +QW  KF   ++  GF  +  
Subjt:  DTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQE----NKVYKLIRSLYGLKQAPKQWHKKFDSVMMANGFKINEC

Query:  DKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM
        D   ++K      + V +YVDD++I  +N   +   K  L + F+++D+
Subjt:  DKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDM

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.4e-2140.37Show/hide
Query:  VTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRIT
        +T  ++ EP++   A+  P    W +A+  E++++  N TW LV  P+    LGCKW+FK K+ +DG++D+ KARLVAKG+ Q+EG+ + +TYSPV R  
Subjt:  VTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVDLPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRIT

Query:  SIRMLIAIS
        +IR ++ ++
Subjt:  SIRMLIAIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCAAGGAATGTAACATTCTTTGAGAATATTTTTCCACACAAAATGACTTGTAAAGCAAGGTTACAAAAACGTTCTTTTGATTCTATAACGAGTGAACCTCAAAA
TAGACCAAATGATGAGTTAAATAAGGATGAGGAACTTAGACGAAGTAAAAGGATGAGGATTTCAAAATCATTTGGGCCTGATTTTGTAACATATTTGTTAGAAAATGAAC
CTCAAACATTTAAAGAGGCCATGTCCTCTCCTGAAGCTCCGTATTGGAAAGAAGCTGTGAATAGTGAAATTGAGTCCATTATGCATAACCATACTTGGGAGCTAGTTGAT
CTTCCATTAGAAAGTACACCACTTGGTTGCAAATGGATTTTCAAACGAAAGATGAAGACCGATGGGTCAATAGATAAATATAAGGCAAGACTTGTTGCCAAAGGATATAA
GCAACAAGAAGGACTTGACTATTTTGATACATACTCACCAGTTACTAGAATTACTTCCATTCGCATGCTCATAGCAATATCAGCTTTGCATGGATTTGAGATACATCAGA
TGGATGTCAAAACAACATTTTTAAATGGTGAGTTAGATGAAGAGATCTACATACAACAACCTGAAGGGTTTGTTTCCCCCGGTCAAGAAAATAAAGTTTACAAATTAATT
AGGTCTCTTTACGGACTAAAACAAGCACCAAAACAATGGCATAAAAAATTTGACAGTGTAATGATGGCCAATGGATTTAAAATCAATGAATGTGACAAATGCGTATATGT
CAAAAGCAATCAGAATGACCATGTCATGGTGTGCTTGTATGTTGATGATATGCTAATTATAGGTAGCAATATCAACATTATTAAGACTACCAAACAAATGTTGGCCAATA
AATTTGAGATGAAAGACATGGATGTCGCAGATGTTATTTTTAGGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCAAGGAATGTAACATTCTTTGAGAATATTTTTCCACACAAAATGACTTGTAAAGCAAGGTTACAAAAACGTTCTTTTGATTCTATAACGAGTGAACCTCAAAA
TAGACCAAATGATGAGTTAAATAAGGATGAGGAACTTAGACGAAGTAAAAGGATGAGGATTTCAAAATCATTTGGGCCTGATTTTGTAACATATTTGTTAGAAAATGAAC
CTCAAACATTTAAAGAGGCCATGTCCTCTCCTGAAGCTCCGTATTGGAAAGAAGCTGTGAATAGTGAAATTGAGTCCATTATGCATAACCATACTTGGGAGCTAGTTGAT
CTTCCATTAGAAAGTACACCACTTGGTTGCAAATGGATTTTCAAACGAAAGATGAAGACCGATGGGTCAATAGATAAATATAAGGCAAGACTTGTTGCCAAAGGATATAA
GCAACAAGAAGGACTTGACTATTTTGATACATACTCACCAGTTACTAGAATTACTTCCATTCGCATGCTCATAGCAATATCAGCTTTGCATGGATTTGAGATACATCAGA
TGGATGTCAAAACAACATTTTTAAATGGTGAGTTAGATGAAGAGATCTACATACAACAACCTGAAGGGTTTGTTTCCCCCGGTCAAGAAAATAAAGTTTACAAATTAATT
AGGTCTCTTTACGGACTAAAACAAGCACCAAAACAATGGCATAAAAAATTTGACAGTGTAATGATGGCCAATGGATTTAAAATCAATGAATGTGACAAATGCGTATATGT
CAAAAGCAATCAGAATGACCATGTCATGGTGTGCTTGTATGTTGATGATATGCTAATTATAGGTAGCAATATCAACATTATTAAGACTACCAAACAAATGTTGGCCAATA
AATTTGAGATGAAAGACATGGATGTCGCAGATGTTATTTTTAGGTATTAA
Protein sequenceShow/hide protein sequence
MESRNVTFFENIFPHKMTCKARLQKRSFDSITSEPQNRPNDELNKDEELRRSKRMRISKSFGPDFVTYLLENEPQTFKEAMSSPEAPYWKEAVNSEIESIMHNHTWELVD
LPLESTPLGCKWIFKRKMKTDGSIDKYKARLVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISALHGFEIHQMDVKTTFLNGELDEEIYIQQPEGFVSPGQENKVYKLI
RSLYGLKQAPKQWHKKFDSVMMANGFKINECDKCVYVKSNQNDHVMVCLYVDDMLIIGSNINIIKTTKQMLANKFEMKDMDVADVIFRY