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Cmc12g0321461 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321461
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionpheophorbide a oxygenase, chloroplastic
Genome locationCMiso1.1chr12:8490195..8492427
RNA-Seq ExpressionCmc12g0321461
SyntenyCmc12g0321461
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462423.1 PREDICTED: pheophorbide a oxygenase, chloroplastic-like isoform X1 [Cucumis melo]1.1e-5297.09Show/hide
Query:  MPEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQVIWICSFNVPMGPGKIRSSYK
        MPEFSSVTIQQDLFYGY+ LTKNISD SHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQVIWICSFNVPMGPGKIRSSYK
Subjt:  MPEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQVIWICSFNVPMGPGKIRSSYK

Query:  GAL
        GAL
Subjt:  GAL
XP_008462433.1 PREDICTED: pheophorbide a oxygenase, chloroplastic-like isoform X2 [Cucumis melo]6.5e-3796.2Show/hide
Query:  MPEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQ
        MPEFSSVTIQQDLFYGY+ LTKNISD SHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQ
Subjt:  MPEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQ
XP_008462467.1 PREDICTED: pheophorbide a oxygenase, chloroplastic [Cucumis melo]3.6e-3568.42Show/hide
Query:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI
        PEFSSVTIQ+DLFYGY+TL +N+SD SHI F+ H+VT R DRAKPL FKLDSNGPWGFSGAN+GNPRISAKFIA                   +K VIWI
Subjt:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI

Query:  CSFNVPMGPGKIRS
        CSFNVPMGPGK RS
Subjt:  CSFNVPMGPGKIRS
XP_023519435.1 pheophorbide a oxygenase, chloroplastic [Cucurbita pepo subsp. pepo]4.6e-3567.54Show/hide
Query:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI
        PEFSSVTIQ+DLFYGY+TL +N+SD SHI F+ H+VT R DRAKPL FKLDSNGPWGFSGAN+GNPRISAKF+A                   +K VIWI
Subjt:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI

Query:  CSFNVPMGPGKIRS
        CSFNVPMGPGK RS
Subjt:  CSFNVPMGPGKIRS
XP_038894382.1 pheophorbide a oxygenase, chloroplastic [Benincasa hispida]4.6e-3567.54Show/hide
Query:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI
        PEFSSVTIQ+DLFYGY+TL +N+SD SHI F+ H+VT R DRAKPL FKLDSNGPWGFSGAN+GNPRISAKF+A                   +K VIWI
Subjt:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI

Query:  CSFNVPMGPGKIRS
        CSFNVPMGPGK RS
Subjt:  CSFNVPMGPGKIRS
TrEMBL top hitse value%identityAlignment
A0A1S3CGX3 pheophorbide a oxygenase, chloroplastic-like isoform X23.1e-3796.2Show/hide
Query:  MPEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQ
        MPEFSSVTIQQDLFYGY+ LTKNISD SHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQ
Subjt:  MPEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQ
A0A1S3CIF7 pheophorbide a oxygenase, chloroplastic-like isoform X15.3e-5397.09Show/hide
Query:  MPEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQVIWICSFNVPMGPGKIRSSYK
        MPEFSSVTIQQDLFYGY+ LTKNISD SHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQVIWICSFNVPMGPGKIRSSYK
Subjt:  MPEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQVIWICSFNVPMGPGKIRSSYK

Query:  GAL
        GAL
Subjt:  GAL
A0A1S3CII7 pheophorbide a oxygenase, chloroplastic1.7e-3568.42Show/hide
Query:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI
        PEFSSVTIQ+DLFYGY+TL +N+SD SHI F+ H+VT R DRAKPL FKLDSNGPWGFSGAN+GNPRISAKFIA                   +K VIWI
Subjt:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI

Query:  CSFNVPMGPGKIRS
        CSFNVPMGPGK RS
Subjt:  CSFNVPMGPGKIRS
A0A5D3DBC9 Pheophorbide a oxygenase1.7e-3568.42Show/hide
Query:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI
        PEFSSVTIQ+DLFYGY+TL +N+SD SHI F+ H+VT R DRAKPL FKLDSNGPWGFSGAN+GNPRISAKFIA                   +K VIWI
Subjt:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI

Query:  CSFNVPMGPGKIRS
        CSFNVPMGPGK RS
Subjt:  CSFNVPMGPGKIRS
A0A6J1HYR3 pheophorbide a oxygenase, chloroplastic2.2e-3567.54Show/hide
Query:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI
        PEFSSVTIQ+DLFYGY+TL +N+SD SHI F+ H+VT R DRAKPL FKLDSNGPWGFSGAN+GNPRISAKF+A                   +K VIWI
Subjt:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI

Query:  CSFNVPMGPGKIRS
        CSFNVPMGPGK RS
Subjt:  CSFNVPMGPGKIRS
SwissProt top hitse value%identityAlignment
Q0DV66 Pheophorbide a oxygenase, chloroplastic2.5e-3156.14Show/hide
Query:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI
        P FS+VTIQ+DL+YGY+TL +N+SD SHI F+ H+VT R DRA+PL FK++S+G WG+SG+N GNPRISA F+A                   +K VIWI
Subjt:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI

Query:  CSFNVPMGPGKIRS
        CSFN+PM PGK RS
Subjt:  CSFNVPMGPGKIRS
Q9FYC2 Pheophorbide a oxygenase, chloroplastic1.0e-3258.77Show/hide
Query:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI
        PEFS+VTIQ+DLFYGY+TL +N+SD SHI F+ H+VT R DRAKPL FK++S+GPWGF GAN  +PRI+AKF+A                   +K VIWI
Subjt:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI

Query:  CSFNVPMGPGKIRS
        CSFN+PM PGK RS
Subjt:  CSFNVPMGPGKIRS
Arabidopsis top hitse value%identityAlignment
AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain7.1e-3458.77Show/hide
Query:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI
        PEFS+VTIQ+DLFYGY+TL +N+SD SHI F+ H+VT R DRAKPL FK++S+GPWGF GAN  +PRI+AKF+A                   +K VIWI
Subjt:  PEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIA------------------FKKQVIWI

Query:  CSFNVPMGPGKIRS
        CSFN+PM PGK RS
Subjt:  CSFNVPMGPGKIRS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAGTTCTCATCAGTTACGATTCAGCAGGATCTATTTTATGGTTACAATACACTAACGAAGAATATATCAGATCGTTCCCACATAGGTTTTTCTCGTCATGAGGT
TACAAGGAGGTGGGACCGGGCAAAACCTTTACATTTCAAGTTGGATTCTAATGGTCCCTGGGGATTTTCTGGAGCAAATAGGGGTAACCCAAGGATTAGTGCCAAGTTTA
TCGCATTCAAGAAACAAGTAATATGGATTTGCTCCTTCAATGTGCCAATGGGACCTGGAAAGATTCGTTCATCATATAAAGGAGCCTTATAA
mRNA sequenceShow/hide mRNA sequence
GGGCTCATCAGTCACCTAGAGCATGTGCCACAAGTGTTCCTACTCTGGTGTCTCAAGGCCTCCTCTTTGTTTGGCCCGATGAGAGTGGTTTGGAAAGAGCCAATGCCACC
ACTCCTAAAGTAGTTGATTCAGAATTAATCATAAGATAGCTTCTCCTTTCCATGTATTATTTGACTGCAATATGAGATAATTCCTTCATTATCGCTGCTATTGTCTAGGC
TCCCTGATGACTTTGATATGCCTGAGTTCTCATCAGTTACGATTCAGCAGGATCTATTTTATGGTTACAATACACTAACGAAGAATATATCAGATCGTTCCCACATAGGT
TTTTCTCGTCATGAGGTTACAAGGAGGTGGGACCGGGCAAAACCTTTACATTTCAAGTTGGATTCTAATGGTCCCTGGGGATTTTCTGGAGCAAATAGGGGTAACCCAAG
GATTAGTGCCAAGTTTATCGCATTCAAGAAACAAGTAATATGGATTTGCTCCTTCAATGTGCCAATGGGACCTGGAAAGATTCGTTCATCATATAAAGGAGCCTTATAAA
ACATTTCGACCTGTGCAAACGCTCCTGATTGGTGCAACTGTTGTTTCTGCGGCCACCATCGGGGTGCGGGTTGGAAGAAAATCATG
Protein sequenceShow/hide protein sequence
MPEFSSVTIQQDLFYGYNTLTKNISDRSHIGFSRHEVTRRWDRAKPLHFKLDSNGPWGFSGANRGNPRISAKFIAFKKQVIWICSFNVPMGPGKIRSSYKGAL