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Cmc12g0321471 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321471
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCyclin-dependent kinases regulatory subunit
Genome locationCMiso1.1chr12:8491518..8494763
RNA-Seq ExpressionCmc12g0321471
SyntenyCmc12g0321471
Gene Ontology termsGO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsIPR000789 - Cyclin-dependent kinase, regulatory subunit
IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV69664.1 CKS domain-containing protein, partial [Cephalotus follicularis]1.0e-4194.57Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILANSQNS
        MGQIQYSEKYFDD YEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQ +LANS  S
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILANSQNS

XP_011654109.1 cyclin-dependent kinases regulatory subunit 1 [Cucumis sativus]3.4e-42100Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

XP_016903011.1 PREDICTED: cyclin-dependent kinases regulatory subunit 1 isoform X1 [Cucumis melo]9.0e-43100Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN
        MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN

XP_022964884.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata]7.7e-4298.85Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

XP_038894383.1 cyclin-dependent kinases regulatory subunit 1 [Benincasa hispida]1.7e-4198.85Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        MGQIQYSEKYFDDIYEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

TrEMBL top hitse value%identityAlignment
A0A0A0LY04 Cyclin-dependent kinases regulatory subunit1.7e-42100Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

A0A1S4E453 Cyclin-dependent kinases regulatory subunit4.4e-43100Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN
        MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAN

A0A1S4E4W6 Cyclin-dependent kinases regulatory subunit1.7e-42100Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

A0A6J1HM34 Cyclin-dependent kinases regulatory subunit3.7e-4298.85Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

A0A6J1I3M7 Cyclin-dependent kinases regulatory subunit3.7e-4298.85Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        MGQIQYSEKYFDDIYEYRHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

SwissProt top hitse value%identityAlignment
A2XCH8 Cyclin-dependent kinases regulatory subunit 18.2e-3993.83Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA
        MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA

O23249 Cyclin-dependent kinases regulatory subunit 16.7e-4190.7Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL
        MGQIQYSEKYFDD +EYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ  ++
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL

P55933 Probable cyclin-dependent kinases regulatory subunit4.2e-2778.79Show/hide
Query:  IQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR
        IQYSEKY+DD +EYRHV+L P+VAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPHI+LFRR
Subjt:  IQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR

Q6PS57 Cyclin-dependent kinases regulatory subunit 18.2e-3993.83Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA
        MGQIQYSEKYFDD YEYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 21.3e-3687.5Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ
        MGQIQYS+KYFDD +EYRHVVL PEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ

Arabidopsis top hitse value%identityAlignment
AT2G27960.1 cyclin-dependent kinase-subunit 14.8e-4290.7Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL
        MGQIQYSEKYFDD +EYRHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ  ++
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL

AT2G27970.1 CDK-subunit 29.3e-3887.5Show/hide
Query:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ
        MGQIQYS+KYFDD +EYRHVVL PEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Subjt:  MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTC
TGAAAATGAATGGAGAGCGATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCACTCAACTATC
AACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAATTCACAAAATTCTTTTGGAGTTCAAACAAAGCGTAAGCAAAGACGACGCTTGCAAGTGCGAGACTGG
CGAGAAGAATACATATCTGTAGAGTAG
mRNA sequenceShow/hide mRNA sequence
GCTCCACAAATTAAATCAATTATTATATTACTAAAAGAGAGGAAACAACCTTTCTATAAATTTACATATTTTCATTTTTATCCCCTCAACTTTCCATATTTCTTCCCTTT
CCCAAAATTCAAACCACTATTTAAACTTCATCATCTCATATCCTTCTTCTTCTTCTTCTTCACCCCTTCTCCAAGATCAAAACAAGCCCTAGCGATTTTTCTGTCTCTTG
TTCGGTGCAATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCG
CCTTCTTTCTGAAAATGAATGGAGAGCGATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCAC
TCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAATTCACAAAATTCTTTTGGAGTTCAAACAAAGCGTAAGCAAAGACGACGCTTGCAAGTG
CGAGACTGGCGAGAAGAATACATATCTGTAGAGTAGAAGGGATACCGATGGTGGCCGCAGAAACAACAGTTGCACCAATCAGGAGCGTTTGCACAGGTCGAAATGTTTTA
TAAGGCTCCTTTATATGATGAACGAATCTTTCCAGGTCCCATTGGCACATTGAAGGAGCAAATCCATATTACCTATAAGAATTTGTTTACAAGGGATTCGTAGTGTTTAG
CAATTAAACAAAAGGAAAGTATGTAGAAACAGTTGCCGGTAAATTCAGCAGGGTGTTGCCAATTTTACGTCAGAGGACATTTTTTTTTCAAGTCTCAAGTCTAACGTGCT
TGGGTCCCTCTGGTCACTTGTGACCACCGTTTCCCACCCTACATTATTAAAAATAATACTTTGTTTCAAATACTAAAAATTTCTTAAGAATAATACATCCATTATTAAAA
TTT
Protein sequenceShow/hide protein sequence
MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILANSQNSFGVQTKRKQRRRLQVRDW
REEYISVE