; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0321521 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321521
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr12:8575734..8576558
RNA-Seq ExpressionCmc12g0321521
SyntenyCmc12g0321521
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025848.1 pol protein [Cucumis melo var. makuwa]8.9e-14292.34Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQ+SENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

KAA0031437.1 pol protein [Cucumis melo var. makuwa]8.9e-14292.34Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQ+SENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

KAA0032541.1 pol protein [Cucumis melo var. makuwa]6.8e-14292.7Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQISENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

KAA0033825.1 pol protein [Cucumis melo var. makuwa]8.9e-14292.34Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQ+SENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

KAA0061201.1 pol protein [Cucumis melo var. makuwa]6.8e-14292.7Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQISENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

TrEMBL top hitse value%identityAlignment
A0A5A7SSL3 Reverse transcriptase3.3e-14292.7Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQISENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

A0A5A7TEQ2 Reverse transcriptase4.3e-14292.34Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQ+SENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

A0A5A7UBS1 Reverse transcriptase4.3e-14292.34Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQ+SENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

A0A5A7V5X5 Pol protein3.3e-14292.7Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQISENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

A0A5D3CQB5 Reverse transcriptase4.3e-14292.34Show/hide
Query:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA
        MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDF+TAFHPQTDGQTERLNQ+LEDMLRACVLEFSGSWDSH HLMEFAYNNSYQATIGMAPFEA
Subjt:  MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEA

Query:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG
        LY KCCRSPVCWGEVGEQRMLGPELVQT N AIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFV PFEILERIG
Subjt:  LYSKCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIG

Query:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL
         +A+RLALPPSF+AVHDVF++SMLR+YVADPTHVVDFEPLQ+SENLSYEEQPVE+LAREVKKL +REI LVK+L
Subjt:  FMAHRLALPPSFSAVHDVFNVSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein8.6e-2331.72Show/hide
Query:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS
        ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTER NQ +E +LR        +W  H  L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS

Query:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF
             SP+      ++     +  +TI V  Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F  PF +L++ G 
Subjt:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF

Query:  MAHRLALPPSFSAV-HDVFNVSMLRRY
          + L LP S   +    F+VS L +Y
Subjt:  MAHRLALPPSFSAV-HDVFNVSMLRRY

P0CT35 Transposon Tf2-2 polyprotein8.6e-2331.72Show/hide
Query:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS
        ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTER NQ +E +LR        +W  H  L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS

Query:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF
             SP+      ++     +  +TI V  Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F  PF +L++ G 
Subjt:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF

Query:  MAHRLALPPSFSAV-HDVFNVSMLRRY
          + L LP S   +    F+VS L +Y
Subjt:  MAHRLALPPSFSAV-HDVFNVSMLRRY

P0CT36 Transposon Tf2-3 polyprotein8.6e-2331.72Show/hide
Query:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS
        ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTER NQ +E +LR        +W  H  L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS

Query:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF
             SP+      ++     +  +TI V  Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F  PF +L++ G 
Subjt:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF

Query:  MAHRLALPPSFSAV-HDVFNVSMLRRY
          + L LP S   +    F+VS L +Y
Subjt:  MAHRLALPPSFSAV-HDVFNVSMLRRY

P0CT41 Transposon Tf2-12 polyprotein8.6e-2331.72Show/hide
Query:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS
        ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTER NQ +E +LR        +W  H  L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS

Query:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF
             SP+      ++     +  +TI V  Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F  PF +L++ G 
Subjt:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF

Query:  MAHRLALPPSFSAV-HDVFNVSMLRRY
          + L LP S   +    F+VS L +Y
Subjt:  MAHRLALPPSFSAV-HDVFNVSMLRRY

Q9UR07 Transposon Tf2-11 polyprotein8.6e-2331.72Show/hide
Query:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS
        ++   G P  II+D D  FTS+ WK         + F+  + PQTDGQTER NQ +E +LR        +W  H  L++ +YNN+  +   M PFE ++ 
Subjt:  IVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYS

Query:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF
             SP+      ++     +  +TI V  Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F  PF +L++ G 
Subjt:  -KCCRSPVCWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGF

Query:  MAHRLALPPSFSAV-HDVFNVSMLRRY
          + L LP S   +    F+VS L +Y
Subjt:  MAHRLALPPSFSAV-HDVFNVSMLRRY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAGCTTGCATTAGGCACGAG
GTTAGACTTCACCACAGCCTTCCACCCTCAGACTGATGGTCAGACTGAGAGATTGAACCAGGTTTTGGAAGACATGCTGCGAGCCTGCGTGCTAGAGTTTTCAGGGAGTT
GGGACTCCCATTCGCATCTGATGGAGTTCGCCTATAATAACAGCTACCAGGCTACCATCGGCATGGCACCATTTGAGGCTCTGTATAGTAAGTGCTGTAGATCTCCTGTC
TGCTGGGGTGAGGTTGGTGAGCAGAGGATGCTAGGTCCCGAGTTAGTTCAGACCATCAATGTAGCCATACAGAAGATCCGAGCTCGTATGCTAACAGCACAGAGCAGACA
GAAGAGTTATGCTGATGTACGACGTAAGGATCTCGAGTTTGAGGTGGGAGACATGGTCTTTCTGAAGGTAGCACCTATGAAGGGTGTTCTGAGGTTCGAGAAGAAGGGAA
AGCTGAGCCCACGCTTCGTAAGGCCGTTTGAGATACTGGAGCGGATTGGCTTTATGGCTCATCGCTTGGCGCTGCCCCCATCTTTTTCTGCAGTGCATGATGTATTCAAT
GTCTCCATGCTAAGGAGGTATGTCGCAGACCCGACGCATGTAGTGGACTTTGAGCCACTGCAAATCAGTGAGAACTTGAGCTACGAGGAGCAGCCTGTCGAGATCTTGGC
AAGAGAGGTCAAGAAGCTCTGTAATCGAGAAATTTCACTGGTCAAAGTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAGCTTGCATTAGGCACGAG
GTTAGACTTCACCACAGCCTTCCACCCTCAGACTGATGGTCAGACTGAGAGATTGAACCAGGTTTTGGAAGACATGCTGCGAGCCTGCGTGCTAGAGTTTTCAGGGAGTT
GGGACTCCCATTCGCATCTGATGGAGTTCGCCTATAATAACAGCTACCAGGCTACCATCGGCATGGCACCATTTGAGGCTCTGTATAGTAAGTGCTGTAGATCTCCTGTC
TGCTGGGGTGAGGTTGGTGAGCAGAGGATGCTAGGTCCCGAGTTAGTTCAGACCATCAATGTAGCCATACAGAAGATCCGAGCTCGTATGCTAACAGCACAGAGCAGACA
GAAGAGTTATGCTGATGTACGACGTAAGGATCTCGAGTTTGAGGTGGGAGACATGGTCTTTCTGAAGGTAGCACCTATGAAGGGTGTTCTGAGGTTCGAGAAGAAGGGAA
AGCTGAGCCCACGCTTCGTAAGGCCGTTTGAGATACTGGAGCGGATTGGCTTTATGGCTCATCGCTTGGCGCTGCCCCCATCTTTTTCTGCAGTGCATGATGTATTCAAT
GTCTCCATGCTAAGGAGGTATGTCGCAGACCCGACGCATGTAGTGGACTTTGAGCCACTGCAAATCAGTGAGAACTTGAGCTACGAGGAGCAGCCTGTCGAGATCTTGGC
AAGAGAGGTCAAGAAGCTCTGTAATCGAGAAATTTCACTGGTCAAAGTTCTTTGA
Protein sequenceShow/hide protein sequence
MTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFTTAFHPQTDGQTERLNQVLEDMLRACVLEFSGSWDSHSHLMEFAYNNSYQATIGMAPFEALYSKCCRSPV
CWGEVGEQRMLGPELVQTINVAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVRPFEILERIGFMAHRLALPPSFSAVHDVFN
VSMLRRYVADPTHVVDFEPLQISENLSYEEQPVEILAREVKKLCNREISLVKVL