CuGenDBv2

Gene ID	Cmc12g0321601
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr12:8663587..8665858
RNA-Seq Expression	Cmc12g0321601
Synteny	Cmc12g0321601
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026271.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.36

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLR+NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQGNDPYLVEKR LAEAGQAVEFS+SSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQD+KRVYWWRNMK EVA+FVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLP TLRGF VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRA ALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GM PFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGVL          RFV PF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.91

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLR+NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMY+D+KRVYWWRNMK EVA+FVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP TLRGF VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRA ALEFPGSWDSHLHLMEF YNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL          RF+GPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.36

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLR+NKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQD+KRVYWWRNMK EVA+FVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLP TLRGF VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRA ALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVL          RFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.36

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLR+NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQD+KR+YWWRNMK EVA+FVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLP TLRGF VIWVVVDRLTKSAHFVPGKSTYT 
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRA ALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+          RFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

KAA0066456.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.82

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLR+ KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVS+GA+TMQLA+L VQPTLRQRIIDAQGNDPYLVEKRGL EAGQ  EFS+SSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTK+YQD+KRVYWWRNMK EVA+FVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP TLRGF VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRA ALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+          RFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPZ2 Pol protein

0.0e+00

95.36

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLR+NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQGNDPYLVEKR LAEAGQAVEFS+SSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQD+KRVYWWRNMK EVA+FVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGLP TLRGF VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLH VPVSIVSD+DARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRA ALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GM PFEALYGKCCRSPVCWGEVGEQ LMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEF +GDKVFLKVAPMRGVL          RFV PF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

A0A5A7U330 Reverse transcriptase

0.0e+00

95.91

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLR+NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMY+D+KRVYWWRNMK EVA+FVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP TLRGF VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRA ALEFPGSWDSHLHLMEF YNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL          RF+GPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

95.36

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLR+NKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGL FE RLCVPSDSAVKTELL EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQD+KRVYWWRNMK EVA+FVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLP TLRGF VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRA ALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVL          RFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

A0A5A7UP94 Pol protein

0.0e+00

95.36

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLR+NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVSVGA+TMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQD+KR+YWWRNMK EVA+FVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLP TLRGF VIWVVVDRLTKSAHFVPGKSTYT 
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRA ALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+          RFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

A0A5A7VJE2 Reverse transcriptase

0.0e+00

94.82

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLR+ KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEVRSFLGL GYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
        SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITR
Subjt:  SRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR

Query:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH
        QAPLHRDLERAEIAVS+GA+TMQLA+L VQPTLRQRIIDAQGNDPYLVEKRGL EAGQ  EFS+SSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMH
Subjt:  QAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMH

Query:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTK+YQD+KRVYWWRNMK EVA+FVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLP TLRGF VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTA

Query:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI
         KWA+LYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRA ALEFPGSWDSHLHLMEFAYNNSYQATI
Subjt:  RKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF
        GMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+          RFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVL----------RFVGPF

Query:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK
        EILERIGPVAYR+ALPPSLSTVHDVFHVSMLRK
Subjt:  EILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

4.6e-108

32.48

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L+N  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ ++V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA

Query:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--

Query:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK
              F GPF +L++ GP  Y + LP S+  +    FHVS L K
Subjt:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK

P0CT35 Transposon Tf2-2 polyprotein

4.6e-108

32.48

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L+N  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ ++V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA

Query:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--

Query:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK
              F GPF +L++ GP  Y + LP S+  +    FHVS L K
Subjt:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK

P0CT36 Transposon Tf2-3 polyprotein

4.6e-108

32.48

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L+N  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ ++V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA

Query:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--

Query:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK
              F GPF +L++ GP  Y + LP S+  +    FHVS L K
Subjt:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK

P0CT37 Transposon Tf2-4 polyprotein

4.6e-108

32.48

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L+N  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ ++V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA

Query:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--

Query:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK
              F GPF +L++ GP  Y + LP S+  +    FHVS L K
Subjt:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK

P0CT41 Transposon Tf2-12 polyprotein

4.6e-108

32.48

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Query:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW
        M +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L+N  L    +KCEF   QV F+G+ +S+ G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW

Query:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL
             ++    P+ +D E   I          + Q+++    + +++    ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++
Subjt:  SHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELL

Query:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA
         + H     +HPG   +   + R + W+ ++ ++ ++V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A
Subjt:  SEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSA

Query:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME
          VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++
Subjt:  HFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--
         +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLR--

Query:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK
              F GPF +L++ GP  Y + LP S+  +    FHVS L K
Subjt:  ------FVGPFEILERIGPVAYRVALPPSLSTV-HDVFHVSMLRK

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

5.4e-27

45.04

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Query:  HLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGAT
ATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGAATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGC
AGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGT
AGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAA
GGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCAGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGA
AGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCG
GTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAAAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATAT
GAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTGTCACATT
CAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAATCACTATGCAGTTAGCCCAGTTGACGGTACAG
CCGACTTTGAGGCAAAGGATCATTGATGCCCAGGGTAACGATCCTTACTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAGGCGGTTGAGTTCTCCATATCCTCTGA
TGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTA
CGAAGATGTATCAGGACATGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGTGAAGTAGCAAAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGG
CAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAATGTGTCCATGGATTTCATTACAGGACTGCCGGGAACTCTGAGGGGTTTTATAGT
GATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGAAAGTGGGCAAAGCTGTACATGTCTGAGATAGTGAGAT
TACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCT
TTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTTTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTT
GATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTGGGTG
AGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACTGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTG
AGGCGGAAGGATCTCGAATTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGTTGGGCCGTTCGAGATTCTGGAGCGGATTGG
CCCTGTAGCTTATCGCGTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRNNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR
SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA
VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAITMQLAQLTVQ
PTLRQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDMKRVYWWRNMKSEVAKFVSRCLVCQQVKAPR
QKPAGLLQPLSIPEWKWENVSMDFITGLPGTLRGFIVIWVVVDRLTKSAHFVPGKSTYTARKWAKLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
FHPQTDGQTERLNQVLEDMLRAFALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
RRKDLEFEVGDKVFLKVAPMRGVLRFVGPFEILERIGPVAYRVALPPSLSTVHDVFHVSMLRK

Cmc12g0321601 (gene) of Melon (Charmono) v1.1 genome