; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0321671 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321671
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr12:8744906..8745754
RNA-Seq ExpressionCmc12g0321671
SyntenyCmc12g0321671
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048423.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.7e-14895.91Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIA LNS+D+QQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIW+DISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
        RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP

KAA0057386.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.7e-14895.91Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIA LNS+D+QQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIW+DISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
        RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP

KAA0061440.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]7.7e-15796.81Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIAELNSNDNQQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPPCYLMEHKSLLMLL
        RSSAYHPQSDGQTEVVNR VEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRAL MTPFQVVYGRKPPPCYLMEHKSLLMLL
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPPCYLMEHKSLLMLL

KAA0065392.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.7e-14895.91Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIA LNS+D+QQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIW+DISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
        RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP

TYK21518.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]7.7e-15796.81Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIAELNSNDNQQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPPCYLMEHKSLLMLL
        RSSAYHPQSDGQTEVVNR VEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRAL MTPFQVVYGRKPPPCYLMEHKSLLMLL
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPPCYLMEHKSLLMLL

TrEMBL top hitse value%identityAlignment
A0A5A7SMQ7 Ty3/gypsy retrotransposon protein8.3e-14995.91Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIA LNS+D+QQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIW+DISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
        RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP

A0A5A7V2E8 Transposon Ty3-G Gag-Pol polyprotein3.7e-15796.81Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIAELNSNDNQQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPPCYLMEHKSLLMLL
        RSSAYHPQSDGQTEVVNR VEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRAL MTPFQVVYGRKPPPCYLMEHKSLLMLL
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPPCYLMEHKSLLMLL

A0A5D3B8Y6 Ty3/gypsy retrotransposon protein8.3e-14995.91Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIA LNS+D+QQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIW+DISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
        RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP

A0A5D3DDC2 Ty3/gypsy retrotransposon protein3.7e-15796.81Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIAELNSNDNQQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPPCYLMEHKSLLMLL
        RSSAYHPQSDGQTEVVNR VEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRAL MTPFQVVYGRKPPPCYLMEHKSLLMLL
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPPCYLMEHKSLLMLL

A0A5D3DYS4 Ty3/gypsy retrotransposon protein8.3e-14995.91Show/hide
Query:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        MKIIA LNS+D+QQD KFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIA ELYWKGMK VIKKYCAECL+CQRNKTLCLS AG
Subjt:  MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
        LLLPLNIP LIW+DISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
        RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDK KEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.3e-3932.21Show/hide
Query:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        K++  LN+ D + +    + +G+L   KD++++   ++L   ++  YH+     H G       I R   WKG++  I++Y   C  CQ NK+      G
Subjt:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
         L P+      W  +SMDF+  LP+++G+  +FVVVDR SK A  +P     +A+  A +F + V+   G P  I++D D +F S  WK+        + 
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP
         S  Y PQ+DGQTE  N+ VE  LRC+C+     W+  I+  +  YN     A  MTPF++V+   P
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP

P0CT35 Transposon Tf2-2 polyprotein2.3e-3932.21Show/hide
Query:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        K++  LN+ D + +    + +G+L   KD++++   ++L   ++  YH+     H G       I R   WKG++  I++Y   C  CQ NK+      G
Subjt:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
         L P+      W  +SMDF+  LP+++G+  +FVVVDR SK A  +P     +A+  A +F + V+   G P  I++D D +F S  WK+        + 
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP
         S  Y PQ+DGQTE  N+ VE  LRC+C+     W+  I+  +  YN     A  MTPF++V+   P
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP

P0CT36 Transposon Tf2-3 polyprotein2.3e-3932.21Show/hide
Query:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        K++  LN+ D + +    + +G+L   KD++++   ++L   ++  YH+     H G       I R   WKG++  I++Y   C  CQ NK+      G
Subjt:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
         L P+      W  +SMDF+  LP+++G+  +FVVVDR SK A  +P     +A+  A +F + V+   G P  I++D D +F S  WK+        + 
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP
         S  Y PQ+DGQTE  N+ VE  LRC+C+     W+  I+  +  YN     A  MTPF++V+   P
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP

P0CT41 Transposon Tf2-12 polyprotein2.3e-3932.21Show/hide
Query:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        K++  LN+ D + +    + +G+L   KD++++   ++L   ++  YH+     H G       I R   WKG++  I++Y   C  CQ NK+      G
Subjt:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
         L P+      W  +SMDF+  LP+++G+  +FVVVDR SK A  +P     +A+  A +F + V+   G P  I++D D +F S  WK+        + 
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP
         S  Y PQ+DGQTE  N+ VE  LRC+C+     W+  I+  +  YN     A  MTPF++V+   P
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP

Q9UR07 Transposon Tf2-11 polyprotein2.3e-3932.21Show/hide
Query:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG
        K++  LN+ D + +    + +G+L   KD++++   ++L   ++  YH+     H G       I R   WKG++  I++Y   C  CQ NK+      G
Subjt:  KIIAELNSNDNQQDIKFNICNGML-KYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAG

Query:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN
         L P+      W  +SMDF+  LP+++G+  +FVVVDR SK A  +P     +A+  A +F + V+   G P  I++D D +F S  WK+        + 
Subjt:  LLLPLNIPMLIWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLN

Query:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP
         S  Y PQ+DGQTE  N+ VE  LRC+C+     W+  I+  +  YN     A  MTPF++V+   P
Subjt:  RSSAYHPQSDGQTEVVNRGVEMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATCATAGCTGAACTAAACAGCAATGACAACCAACAAGACATCAAGTTCAACATATGCAATGGAATGTTGAAGTACAAAGATCGGTTGGTAATATCACAATCATC
TAAATTGATACCTCAAGTATTGCATAGCTATCATGATTCGGCAGTGGGAGGGCACTCAGGTTTTCTTCGCACGTATAAACGTATTGCGAGGGAACTATATTGGAAAGGGA
TGAAGGCTGTTATCAAGAAATATTGTGCCGAATGCTTGTTATGTCAACGGAACAAGACACTATGTCTATCACTAGCAGGCCTACTACTTCCGTTAAACATCCCTATGCTA
ATCTGGAGTGATATATCTATGGATTTTGTGGAAGGTTTACCTAAAGCAGCGGGCTTCGAAGTCATTTTCGTGGTAGTAGATCGATTGAGTAAATATGCCCATTTCTTGCC
ACTCAAACACCCATATTCAGCAAAAACAGTAGCAGACTTATTCGTCAAGGAGGTAGTTCGGTTACACGGATTTCCTACCTCCATTGTATCGGATAGGGATCGGGTGTTCC
TTAGCAACTTTTGGAAAGAAATGTTCCGCTTAGCCGGGACAAAACTAAATAGAAGCTCAGCGTATCATCCACAATCCGATGGACAAACCGAAGTAGTGAATAGAGGAGTT
GAGATGTACTTGAGATGCCTCTGTAATGATAAACTCAAGGAGTGGATTAAATGGATAGCGTGGGCTGAATATTGGTACAATACCACATTCCAAAGAGCATTGGGAATGAC
ACCCTTCCAAGTTGTTTATGGACGGAAACCGCCCCCTTGTTATCTTATGGAACACAAGTCTCTTCTAATGCTACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATCATAGCTGAACTAAACAGCAATGACAACCAACAAGACATCAAGTTCAACATATGCAATGGAATGTTGAAGTACAAAGATCGGTTGGTAATATCACAATCATC
TAAATTGATACCTCAAGTATTGCATAGCTATCATGATTCGGCAGTGGGAGGGCACTCAGGTTTTCTTCGCACGTATAAACGTATTGCGAGGGAACTATATTGGAAAGGGA
TGAAGGCTGTTATCAAGAAATATTGTGCCGAATGCTTGTTATGTCAACGGAACAAGACACTATGTCTATCACTAGCAGGCCTACTACTTCCGTTAAACATCCCTATGCTA
ATCTGGAGTGATATATCTATGGATTTTGTGGAAGGTTTACCTAAAGCAGCGGGCTTCGAAGTCATTTTCGTGGTAGTAGATCGATTGAGTAAATATGCCCATTTCTTGCC
ACTCAAACACCCATATTCAGCAAAAACAGTAGCAGACTTATTCGTCAAGGAGGTAGTTCGGTTACACGGATTTCCTACCTCCATTGTATCGGATAGGGATCGGGTGTTCC
TTAGCAACTTTTGGAAAGAAATGTTCCGCTTAGCCGGGACAAAACTAAATAGAAGCTCAGCGTATCATCCACAATCCGATGGACAAACCGAAGTAGTGAATAGAGGAGTT
GAGATGTACTTGAGATGCCTCTGTAATGATAAACTCAAGGAGTGGATTAAATGGATAGCGTGGGCTGAATATTGGTACAATACCACATTCCAAAGAGCATTGGGAATGAC
ACCCTTCCAAGTTGTTTATGGACGGAAACCGCCCCCTTGTTATCTTATGGAACACAAGTCTCTTCTAATGCTACTTTAG
Protein sequenceShow/hide protein sequence
MKIIAELNSNDNQQDIKFNICNGMLKYKDRLVISQSSKLIPQVLHSYHDSAVGGHSGFLRTYKRIARELYWKGMKAVIKKYCAECLLCQRNKTLCLSLAGLLLPLNIPML
IWSDISMDFVEGLPKAAGFEVIFVVVDRLSKYAHFLPLKHPYSAKTVADLFVKEVVRLHGFPTSIVSDRDRVFLSNFWKEMFRLAGTKLNRSSAYHPQSDGQTEVVNRGV
EMYLRCLCNDKLKEWIKWIAWAEYWYNTTFQRALGMTPFQVVYGRKPPPCYLMEHKSLLMLL