; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0321741 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321741
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description50S ribosomal protein L22, chloroplastic
Genome locationCMiso1.1chr12:8773442..8773873
RNA-Seq ExpressionCmc12g0321741
SyntenyCmc12g0321741
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001063 - Ribosomal protein L22/L17
IPR005727 - Ribosomal protein L22, bacterial/chloroplast-type
IPR036394 - Ribosomal protein L22/L17 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABI97456.1 ribosomal protein L22 [Cucumis sativus]8.1e-7092.31Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYR CY ILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRA+GRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VN+EEFKRYQYTIN+PGGLITKEKYTDM CY+MY NGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

AHM88940.1 ribosomal protein L22, partial [Lagenaria siceraria]8.9e-6991.1Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYR CY ILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTI---NKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        +N+EEFKRYQYTI   NKPGG ITKEKYTDMTCY+MY NGGLWDKK
Subjt:  VNKEEFKRYQYTI---NKPGGLITKEKYTDMTCYEMYTNGGLWDKK

ASY96327.1 ribosomal protein L22 [Cucumis melo subsp. agrestis]1.6e-7397.2Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VNKEEF+RYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

YP_004841823.1 ribosomal protein L22 [Cucumis melo subsp. melo]5.4e-7497.9Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

YP_009004082.1 ribosomal protein L22 [Cucumis hystrix]8.1e-7092.31Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYR CY ILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRA+GRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VN+EEFKRYQYTIN+PGGLITKEKYTDM CY+MY NGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

TrEMBL top hitse value%identityAlignment
A0A1S4EU49 50S ribosomal protein L22, chloroplastic2.6e-7497.9Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

A0A249RXQ3 50S ribosomal protein L22, chloroplastic2.6e-7497.9Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

A0A249RYZ8 50S ribosomal protein L22, chloroplastic2.6e-7497.9Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

A0A249RZ70 50S ribosomal protein L22, chloroplastic2.6e-7497.9Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

A0A286NFP5 50S ribosomal protein L22, chloroplastic2.6e-7497.9Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

SwissProt top hitse value%identityAlignment
A4QK57 50S ribosomal protein L22, chloroplastic6.2e-4969.23Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MS HKARRVIDQIRGRSYEE +MILELMPYR CY I KLVYSAAANASHN GF + +LVISKAEVNQG TVKKLKPRARGRSYPIKR TC ITIVL+DT 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
           ++++ Y   + KPG      +  ++TCY+ Y++GGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

A4QLN3 50S ribosomal protein L22, chloroplastic2.8e-4968.97Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDT-
        MS HKARRVIDQIRGRSYEE +MILELMPYR CY I KLVYSAAANASHN GF + +LVISKAEVNQG TVKKLKPRARGRSYPIKR TC ITIVL+D  
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDT-

Query:  -YVNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
         Y   +E+  Y   + KPG   +  +  ++TCY+ Y++GGLWDKK
Subjt:  -YVNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

A6MM76 50S ribosomal protein L22, chloroplastic7.9e-5273.43Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MS HKARRVIDQIRGRSYEE +MILELMPYR CY I KLVYSAAANASHNMGFN+ D VISKAEVN GT+VKKLKPRARGRSY IKRPTC ITIVLKD Y
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        ++    ++Y   + K  G I + KYTDMTC +MY +GG+WDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

Q49KV9 50S ribosomal protein L22, chloroplastic2.1e-4972.03Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MS HKARRVIDQIRGRSYEET+MILELMPYR CY I KLVYSAAANASHNMGFN+  LVISKAEVN+GTT+KKLKPRARGRSY IKRPTC I IVLKD  
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
          +EE     +   K      K+KYTDMT + M   GGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

Q4VZM9 50S ribosomal protein L22, chloroplastic1.1e-7292.31Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MSPHKARRVIDQIRGRSYEETMMILELMPYR CY ILKLVYSAAANASHNMGFN+RDLVISKAEVNQGTTVKKLKPRA+GRSYPIKRPTCSITIVLK+T 
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
        VN+EEFKRYQYTIN+PGGLITKEKYTDM CY+MY NGGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK

Arabidopsis top hitse value%identityAlignment
AT1G52370.1 Ribosomal protein L22p/L17e family protein2.4e-1132.04Show/hide
Query:  SPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTYV
        SP K   V   +RG   E+ +M L++   R    + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T+++++T  
Subjt:  SPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTYV

Query:  NKE
         +E
Subjt:  NKE

AT1G52370.2 Ribosomal protein L22p/L17e family protein2.4e-1132.04Show/hide
Query:  SPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTYV
        SP K   V   +RG   E+ +M L++   R    + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T+++++T  
Subjt:  SPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTYV

Query:  NKE
         +E
Subjt:  NKE

AT1G52370.3 Ribosomal protein L22p/L17e family protein2.4e-1132.04Show/hide
Query:  SPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTYV
        SP K   V   +RG   E+ +M L++   R    + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T+++++T  
Subjt:  SPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTYV

Query:  NKE
         +E
Subjt:  NKE

AT4G28360.1 Ribosomal protein L22p/L17e family protein9.0e-1131.07Show/hide
Query:  SPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTYV
        SP K   V   +RG   E+ ++ L++   R    + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P C +T+++++T  
Subjt:  SPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTYV

Query:  NKE
         +E
Subjt:  NKE

ATCG00810.1 ribosomal protein L221.7e-4968.53Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY
        MS HKARRVIDQIRGRSYEE +MILELMPYR CY I KLVYSAAANASHN GF + +LVISKAEVNQG TVKKLKPRARGRSYPIKR TC ITIVL+D  
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTY

Query:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK
           ++++ Y   + KPG      +  ++TCY+ Y++GGLWDKK
Subjt:  VNKEEFKRYQYTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCCTCACAAAGCACGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTT
AAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACAAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGGTACTACTGTGAAAAAAT
TAAAACCTCGAGCTAGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAGATACATATGTGAATAAAGAAGAATTTAAAAGATACCAA
TACACCATAAACAAACCTGGTGGATTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCCTCACAAAGCACGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAACATGTTATGCAATTTT
AAAATTGGTTTATTCGGCAGCAGCAAATGCTAGCCACAATATGGGTTTCAACAAAAGAGATTTAGTCATTAGTAAAGCAGAGGTCAATCAAGGTACTACTGTGAAAAAAT
TAAAACCTCGAGCTAGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAGATACATATGTGAATAAAGAAGAATTTAAAAGATACCAA
TACACCATAAACAAACCTGGTGGATTGATAACTAAAGAAAAGTACACAGATATGACGTGTTATGAGATGTATACTAATGGGGGATTATGGGACAAAAAATAA
Protein sequenceShow/hide protein sequence
MSPHKARRVIDQIRGRSYEETMMILELMPYRTCYAILKLVYSAAANASHNMGFNKRDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKDTYVNKEEFKRYQ
YTINKPGGLITKEKYTDMTCYEMYTNGGLWDKK