; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0321781 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0321781
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein, putative, Ty1-copia subclass
Genome locationCMiso1.1chr12:8782270..8783286
RNA-Seq ExpressionCmc12g0321781
SyntenyCmc12g0321781
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8700517.1 hypothetical protein F3Y22_tig00110556pilonHSYRG00215 [Hibiscus syriacus]5.2e-8347.75Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M QP G+     +D  CLL KS+YGLKQ PR WYKR + F++ +GF RSSYD  VY+     +  V+LLL+VDD L+A  SK+++  +K +L+ EFDMKD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LG + KILG++ITRDR K+ L +SQ +Y +K++ RFN+   + +T PI QHF+L  +NS +    E K  MEN+PY+  VGS++Y M+ +  DL+Y+ SI
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        +SR+MAN GK HWEA KW LRYL  +    L+++K      +++GYV S++A   D R++L G+IF      +SWK+ L S+VALSTT+AEYI ++EA+K
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK
        E +WL+G +E+  I+Q  + ++CDNQS IHL +
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK

KAF5812358.1 putative RNA-directed DNA polymerase [Helianthus annuus]1.8e-8348.36Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M QP+GF  +G+ED  CLL +S+YGLKQ PR WYKR + ++V   F+RSSYD  VY         VYLLL+VDD L+A    +++ + KDLL  EFDMK+
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LGE++KILG++ITRD+ + IL ++QS+Y +K++  F + N + +++P A HFKL A N P D   E  KQME  PY+  VGSL+YLM+ T  D+ Y AS+
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        VSRY+AN GK HWEA KW++RYL  S+   L ++  ++ +  ++GYV S+FA D D+ R++ GY F    NL+SWK +L  +VALS+T+AEYI L+EAVK
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLKKS
        E +WLKG + +         + CDNQ  + L K S
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLKKS

PPS20553.1 hypothetical protein GOBAR_AA00016 [Gossypium barbadense]4.4e-8248.65Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M+QP+GF V GKED  CLL KS+YGLKQ PR WYKR + F++  G+ R  YD  VY    +    +YLLL+VDD L+A  +  ++  +K  LS EF+MKD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LG ++KILG+DI RDR    L +SQ  Y +K+++RF +   ++++ P+A HFKL A  SP     E K+QM ++PYS  VGS++Y M+ T  D+S++ S+
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        VSRYM+  GK HW+A KWILRYL  S    L+Y ++  ++  + GYV S++A D DKRR+L GY+F Y+   ISWK  L S VALSTT+AEY+ L+EAVK
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK
        E LW+KG +    ++Q    ++CD+QS IHL K
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK

XP_019435951.1 PREDICTED: uncharacterized protein LOC109342419, partial [Lupinus angustifolius]3.3e-8250.15Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        MKQP+GFEVQGKED  CLL KS+YGLKQ  R WY+R + F++  G+ RS +D  VY      K  +YLLL+VDD L+A  +  ++  +K  LS EF+MKD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LG  RKILG++I RDR +  L +SQ  Y +K++ RF + N + +T P+A HFKL     P  T+ E+ ++M +VPY+  VGSL+Y MI T  D++ + S+
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        VSRYMA+ GK HW+A KWI+RYL  +    L+Y K      ++IGYV S++A D DKRR+L GY+F      +SWK TL SIVALSTT+AEYI ++EAVK
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK
        E +W KG +E+  I+     IYCD+QS IHL K
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK

XP_031737558.1 secreted RxLR effector protein 161-like [Cucumis sativus]1.0e-8375.23Show/hide
Query:  MKDLGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYS
        MKDL ES+KILGIDI RDRD+S L I+Q++YC+K+IRRFNLTN R +TLPIA HFKL A NSPS+TDIEHK QM+NVPYSQ VGSL+YLMIST  DLSYS
Subjt:  MKDLGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYS

Query:  ASIVSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSE
        AS+VS+YMAN G+RHWEATKWI+RYLIWSK A+L YQ+ T+  LELIGYV S+FA DSDKRR+L GY+FLY  NLISWK  L SIVALSTT+AEYI LSE
Subjt:  ASIVSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSE

Query:  AVKERLWLKGSMEDFVIK
         VKERLWLKG M DF IK
Subjt:  AVKERLWLKGSMEDFVIK

TrEMBL top hitse value%identityAlignment
A0A251V331 Putative zinc finger, CCHC-type8.6e-8448.36Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M QP+GF  +G+ED  CLL +S+YGLKQ PR WYKR + ++V   F+RSSYD  VY         VYLLL+VDD L+A    +++ + KDLL  EFDMK+
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LGE++KILG++ITRD+ + IL ++QS+Y +K++  F + N + +++P A HFKL A N P D   E  KQME  PY+  VGSL+YLM+ T  D+ Y AS+
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        VSRY+AN GK HWEA KW++RYL  S+   L ++  ++ +  ++GYV S+FA D D+ R++ GY F    NL+SWK +L  +VALS+T+AEYI L+EAVK
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLKKS
        E +WLKG + +         + CDNQ  + L K S
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLKKS

A0A2P5W031 Uncharacterized protein2.1e-8248.65Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M+QP+GF V GKED  CLL KS+YGLKQ PR WYKR + F++  G+ R  YD  VY    +    +YLLL+VDD L+A  +  ++  +K  LS EF+MKD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LG ++KILG+DI RDR    L +SQ  Y +K+++RF +   ++++ P+A HFKL A  SP     E K+QM ++PYS  VGS++Y M+ T  D+S++ S+
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        VSRYM+  GK HW+A KWILRYL  S    L+Y ++  ++  + GYV S++A D DKRR+L GY+F Y+   ISWK  L S VALSTT+AEY+ L+EAVK
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK
        E LW+KG +    ++Q    ++CD+QS IHL K
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK

A0A2P5YYC3 Uncharacterized protein2.1e-8248.65Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M+QP+GF V GKED  CLL KS+YGLKQ PR WYKR + F++  G+ R  YD  VY    +    +YLLL+VDD L+A  +  ++  +K  LS EF+MKD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LG ++KILG+DI RDR    L +SQ  Y +K+++RF +   ++++ P+A HFKL A  SP     E K+QM ++PYS  VGS++Y M+ T  D+S++ S+
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        VSRYM+  GK HW+A KWILRYL  S    L+Y ++  ++  + GYV S++A D DKRR+L GY+F Y+   ISWK  L S VALSTT+AEY+ L+EAVK
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK
        E LW+KG +    ++Q    ++CD+QS IHL K
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK

A0A2U1MW82 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-8147.46Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        ++QP+GFEV GKED  C L KS+YGLKQ PR WYKR + F++G G+ R SYD  VY+        +YL+L+VDD L+A  +KD +  +KD LS EFDMKD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LG ++KILG++I RDR    L +SQS Y  K+++RFN++N + I  P+A HFKL +   P     E K+ M  VPYS  VGSL+Y M+ T  DL+++ S+
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        VSRYM N G+ HW+A K ILRYL  +    L ++K+  S   ++GYV S++A D D R++L+ Y+F +  + ISW ++L +I ALSTT+AEYI+ +E VK
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLKKS
        E +WL+G + +  + Q+ + +YCDN+S +HL K +
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLKKS

A0A6A3A9V0 Uncharacterized protein2.5e-8347.75Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M QP G+     +D  CLL KS+YGLKQ PR WYKR + F++ +GF RSSYD  VY+     +  V+LLL+VDD L+A  SK+++  +K +L+ EFDMKD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LG + KILG++ITRDR K+ L +SQ +Y +K++ RFN+   + +T PI QHF+L  +NS +    E K  MEN+PY+  VGS++Y M+ +  DL+Y+ SI
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        +SR+MAN GK HWEA KW LRYL  +    L+++K      +++GYV S++A   D R++L G+IF      +SWK+ L S+VALSTT+AEYI ++EA+K
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK
        E +WL+G +E+  I+Q  + ++CDNQS IHL +
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLK

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.2e-4735.33Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYI-NSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMK
        M+ P+G  +    D  C LNK+IYGLKQ  RCW++     +    F  SS D  +YI +     + +Y+LL+VDD ++A      + + K  L ++F M 
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYI-NSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMK

Query:  DLGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSAS
        DL E +  +GI I    DK  + +SQS Y KK++ +FN+ N  +++ P+         NS  D          N P   ++G L+Y+M+ T  DL+ + +
Subjt:  DLGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSAS

Query:  IVSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIF-LYTLNLISWKTTLLSIVALSTTKAEYITLSEA
        I+SRY +      W+  K +LRYL  +   KLI++K      ++IGYV S++A     R++  GY+F ++  NLI W T   + VA S+T+AEY+ L EA
Subjt:  IVSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIF-LYTLNLISWKTTLLSIVALSTTKAEYITLSEA

Query:  VKERLWLKGSMEDFVIK-QSTVKIYCDNQSNIHL
        V+E LWLK  +    IK ++ +KIY DNQ  I +
Subjt:  VKERLWLKGSMEDFVIK-QSTVKIYCDNQSNIHL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-6842.09Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M+QP+GFEV GK+ + C LNKS+YGLKQ PR WY + + F+    + ++  D  VY    +  + + LLL+VDD L+    K  +  +K  LSK FDMKD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LG +++ILG+ I R+R    L +SQ  Y ++++ RFN+ N + ++ P+A H KL     P  T +E K  M  VPYS  VGSL+Y M+ T  D++++  +
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        VSR++ N GK HWEA KWILRYL  +    L +     S+  L GY  ++ A D D R++  GY+F ++   ISW++ L   VALSTT+AEYI  +E  K
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLKKS
        E +WLK  +++  + Q    +YCD+QS I L K S
Subjt:  ERLWLKGSMEDFVIKQSTVKIYCDNQSNIHLLKKS

P25600 Putative transposon Ty5-1 protein YCL074W2.4e-2730.13Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        +KQP GF  +   D    L   +YGLKQ P  W + +N+ +  +GF R   +  +Y  ST+    +Y+ ++VDD L+A  S      VK  L+K + MKD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
        LG+  K LG++I +  +  I  +S   Y  K      +   +    P+     L  T SP   DI         PY  +VG L++   +   D+SY  S+
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKT-TLLSIVALSTTKAEYITLSEAV
        +SR++      H E+ + +LRYL  ++   L Y+    S L L  Y  +   +  D   +  GY+ L     ++W +  L  ++ + +T+AEYIT SE V
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKT-TLLSIVALSTTKAEYITLSEAV

Query:  KE
         E
Subjt:  KE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.2e-3131.63Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M QP GF  + + +  C L K++YGLKQ PR WY  L ++++ +GF  S  D  +++     K  VY+L++VDD L+  +    L +  D LS+ F +KD
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
          E    LGI+    R  + L +SQ  Y   L+ R N+   + +T P+A   KL   +    TD           Y  +VGSL YL   T  D+SY+ + 
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        +S++M    + H +A K ILRYL  +    +  +K   + L L  Y  +++A D D   +  GYI     + ISW +     V  S+T+AEY +++    
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQSTVK-IYCDNQSNIHL
        E  W+   + +  I+ +    IYCDN    +L
Subjt:  ERLWLKGSMEDFVIKQSTVK-IYCDNQSNIHL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.6e-3231.93Show/hide
Query:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD
        M QP GF  + + D  C L K+IYGLKQ PR WY  L  +++ +GF  S  D  +++     +  +Y+L++VDD L+  +    L H  D LS+ F +K+
Subjt:  MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKD

Query:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI
          +    LGI+  R      L +SQ  Y   L+ R N+   + +  P+A         SP  T     K  +   Y  +VGSL YL   T  DLSY+ + 
Subjt:  LGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASI

Query:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK
        +S+YM      HW A K +LRYL  +    +  +K   + L L  Y  +++A D+D   +  GYI     + ISW +     V  S+T+AEY +++    
Subjt:  VSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVK

Query:  ERLWLKGSMEDFVIKQS-TVKIYCDNQSNIHL
        E  W+   + +  I+ S    IYCDN    +L
Subjt:  ERLWLKGSMEDFVIKQS-TVKIYCDNQSNIHL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-2727.98Show/hide
Query:  MKQPKGFEVQGKEDL----YCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEF
        MK P G+  +  + L     C L KSIYGLKQ  R W+ + +  ++G GF +S  D + Y    T    + +L++VDD ++  ++   +  +K  L   F
Subjt:  MKQPKGFEVQGKEDL----YCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEF

Query:  DMKDLGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSY
         ++DLG  +  LG++I   R  + + I Q  Y   L+    L   +  ++P+       A +     D +         Y +++G L+YL I T LD+S+
Subjt:  DMKDLGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSY

Query:  SASIVSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLS
        + + +S++       H +A   IL Y+  +    L Y  ++++ ++L  +  + F S  D RR+  GY      +LISWK+    +V+ S+ +AEY  LS
Subjt:  SASIVSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLS

Query:  EAVKERLWLKGSMEDFVIKQS-TVKIYCDNQSNIHL
         A  E +WL     +  +  S    ++CDN + IH+
Subjt:  EAVKERLWLKGSMEDFVIKQS-TVKIYCDNQSNIHL

ATMG00810.1 DNA/RNA polymerases superfamily protein1.3e-1530.04Show/hide
Query:  VYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKDLGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDI
        +YLLL+VDD LL  SS   L  +   LS  F MKDLG     LGI I      S L +SQ+ Y ++++    + + + ++ P+      L  NS   T  
Subjt:  VYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKDLGESRKILGIDITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDI

Query:  EHKKQMENVPYSQVVGSLIYLMISTILDLSYSASIVSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYI
           K  +   +  +VG+L YL + T  D+SY+ +IV + M       ++  K +LRY+  +    L   K +K N++   +  S++A  +  RR+  G+ 
Subjt:  EHKKQMENVPYSQVVGSLIYLMISTILDLSYSASIVSRYMANLGKRHWEATKWILRYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYI

Query:  FLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVKERLWLKGS
             N+ISW       V+ S+T+ EY  L+    E  W   S
Subjt:  FLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVKERLWLKGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAACCCAAAGGATTTGAGGTACAAGGAAAGGAAGATCTCTACTGCTTATTAAATAAGTCAATCTATGGGTTAAAGCAACCACCTAGGTGTTGGTATAAAAGACT
TAATCACTTTATAGTTGGTTTGGGTTTTCAAAGAAGCTCATATGATATGTATGTCTATATAAACTCAACAACCTATAAAGACAAGGTCTACTTGTTACTCTTTGTGGATG
ACACGCTCCTTGCCAGAAGCTCTAAAGATGACTTAGTTCATGTCAAAGATCTTTTAAGTAAAGAATTTGACATGAAAGACCTAGGGGAATCAAGGAAGATATTAGGGATT
GACATAACTAGAGATAGAGACAAATCTATACTAATCATCAGTCAATCAACCTATTGTAAGAAGTTAATCAGGAGGTTTAACCTTACAAATATTAGATCAATAACTCTTCC
TATTGCACAACACTTTAAACTATTAGCTACAAATTCTCCTAGTGATACTGACATTGAACACAAAAAACAAATGGAAAATGTGCCCTACAGCCAAGTTGTAGGAAGCCTAA
TATACCTAATGATCTCTACAATACTTGACTTATCCTATTCAGCAAGCATAGTTAGTAGATACATGGCTAATCTGGGAAAGAGGCATTGGGAAGCAACCAAATGGATACTA
AGATATCTGATCTGGTCTAAGTGTGCCAAATTAATCTACCAAAAGGCCACAAAATCAAACTTAGAACTAATTGGCTATGTAGTTTCTGAATTTGCCAGTGACAGTGACAA
GAGAAGAAACCTAGCAGGATATATCTTTCTCTACACTCTTAATTTAATTAGTTGGAAAACAACCCTATTATCTATTGTTGCACTCTCAACCACAAAAGCAGAATACATAA
CTCTATCAGAGGCAGTAAAAGAAAGACTATGGCTTAAAGGATCGATGGAGGATTTTGTAATCAAACAGTCGACTGTAAAAATCTACTGTGATAACCAAAGCAACATACAT
CTATTAAAAAAATCCACAATTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACAACCCAAAGGATTTGAGGTACAAGGAAAGGAAGATCTCTACTGCTTATTAAATAAGTCAATCTATGGGTTAAAGCAACCACCTAGGTGTTGGTATAAAAGACT
TAATCACTTTATAGTTGGTTTGGGTTTTCAAAGAAGCTCATATGATATGTATGTCTATATAAACTCAACAACCTATAAAGACAAGGTCTACTTGTTACTCTTTGTGGATG
ACACGCTCCTTGCCAGAAGCTCTAAAGATGACTTAGTTCATGTCAAAGATCTTTTAAGTAAAGAATTTGACATGAAAGACCTAGGGGAATCAAGGAAGATATTAGGGATT
GACATAACTAGAGATAGAGACAAATCTATACTAATCATCAGTCAATCAACCTATTGTAAGAAGTTAATCAGGAGGTTTAACCTTACAAATATTAGATCAATAACTCTTCC
TATTGCACAACACTTTAAACTATTAGCTACAAATTCTCCTAGTGATACTGACATTGAACACAAAAAACAAATGGAAAATGTGCCCTACAGCCAAGTTGTAGGAAGCCTAA
TATACCTAATGATCTCTACAATACTTGACTTATCCTATTCAGCAAGCATAGTTAGTAGATACATGGCTAATCTGGGAAAGAGGCATTGGGAAGCAACCAAATGGATACTA
AGATATCTGATCTGGTCTAAGTGTGCCAAATTAATCTACCAAAAGGCCACAAAATCAAACTTAGAACTAATTGGCTATGTAGTTTCTGAATTTGCCAGTGACAGTGACAA
GAGAAGAAACCTAGCAGGATATATCTTTCTCTACACTCTTAATTTAATTAGTTGGAAAACAACCCTATTATCTATTGTTGCACTCTCAACCACAAAAGCAGAATACATAA
CTCTATCAGAGGCAGTAAAAGAAAGACTATGGCTTAAAGGATCGATGGAGGATTTTGTAATCAAACAGTCGACTGTAAAAATCTACTGTGATAACCAAAGCAACATACAT
CTATTAAAAAAATCCACAATTCCATAG
Protein sequenceShow/hide protein sequence
MKQPKGFEVQGKEDLYCLLNKSIYGLKQPPRCWYKRLNHFIVGLGFQRSSYDMYVYINSTTYKDKVYLLLFVDDTLLARSSKDDLVHVKDLLSKEFDMKDLGESRKILGI
DITRDRDKSILIISQSTYCKKLIRRFNLTNIRSITLPIAQHFKLLATNSPSDTDIEHKKQMENVPYSQVVGSLIYLMISTILDLSYSASIVSRYMANLGKRHWEATKWIL
RYLIWSKCAKLIYQKATKSNLELIGYVVSEFASDSDKRRNLAGYIFLYTLNLISWKTTLLSIVALSTTKAEYITLSEAVKERLWLKGSMEDFVIKQSTVKIYCDNQSNIH
LLKKSTIP