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Cmc12g0322461 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0322461
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionLipoyl synthase, chloroplastic
Genome locationCMiso1.1chr12:10294609..10295127
RNA-Seq ExpressionCmc12g0322461
SyntenyCmc12g0322461
Gene Ontology termsGO:0009107 - lipoate biosynthetic process (biological process)
GO:0016992 - lipoate synthase activity (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR003698 - Lipoyl synthase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573763.1 Lipoyl synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3392.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

XP_008445908.1 PREDICTED: lipoyl synthase, chloroplastic [Cucumis melo]9.3e-3493.75Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

XP_022945153.1 lipoyl synthase, chloroplastic [Cucurbita moschata]1.2e-3392.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

XP_023541459.1 lipoyl synthase, chloroplastic [Cucurbita pepo subsp. pepo]1.2e-3392.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

XP_038893417.1 lipoyl synthase, chloroplastic-like [Benincasa hispida]9.3e-3493.75Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

TrEMBL top hitse value%identityAlignment
A0A0A0KPN0 Lipoyl synthase, chloroplastic5.9e-3492.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

A0A1S3BDA7 Lipoyl synthase, chloroplastic4.5e-3493.75Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

A0A5D3CZE8 Lipoyl synthase, chloroplastic4.5e-3493.75Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

A0A6J1G009 Lipoyl synthase, chloroplastic5.9e-3492.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

A0A6J1HVC4 Lipoyl synthase, chloroplastic5.9e-3492.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DDI +GGSG+FAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

SwissProt top hitse value%identityAlignment
B8B016 Lipoyl synthase 2, chloroplastic6.5e-3079.75Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRA
        +VLTSVD DD+ +GGSG+FAQTVKA+KELKP I+VECLTSDFRGDL+AV +L  SGLDVFAHNIETV+ LQRIVRDPRA
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRA

B9I666 Lipoyl synthase 1, chloroplastic2.3e-3587.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +V+TSVD DD+ +GGSG+FAQTV+AMKELKPEIMVECLTSDFRGDLKAV+TLVHSGLDVFAHN+ETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

B9N2B0 Lipoyl synthase 2, chloroplastic1.8e-3587.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +V+TSVD DD+ +GGSG+FAQTV+AMKELKPEIMVECLTSDFRGDLKAV+TLVHSGLDVFAHN+ETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

B9RX57 Lipoyl synthase, chloroplastic2.5e-3486.25Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +VLTSVD DD+ +GGSG+F++TV+AMK+LKPEIMVECLTSDFRGDL+AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

Q8LEE8 Lipoyl synthase, chloroplastic2.2e-3382.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +V+TSVD DDI +GGSG+FAQTVKAMK  KP+IM+ECLTSDFRGDL+AV+TLVHSGLDVFAHN+ETVKRLQR+VRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG

Arabidopsis top hitse value%identityAlignment
AT2G20860.1 lipoic acid synthase 17.4e-2159.49Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRA
        +V+TSVD DD+ + GSG+FA+TV+ +K LKPE+++E L  DFRGD   VE +  SGLDV AHNIETV+ LQ  VRD RA
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRA

AT5G08415.1 Radical SAM superfamily protein1.5e-3482.5Show/hide
Query:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG
        +V+TSVD DDI +GGSG+FAQTVKAMK  KP+IM+ECLTSDFRGDL+AV+TLVHSGLDVFAHN+ETVKRLQR+VRDPRAG
Subjt:  LVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGTGGATTGGTCTTAACAAGTGTAGATTGTGATGATATTCATAATGGAGGAAGTGGGTATTTTGCTCAAACAGTTAAAGCAATGAAGGAACTTAAGCCCGAGAT
AATGGTTGAATGCTTAACTTCTGATTTCCGAGGTGACTTAAAGGCTGTGGAGACTCTTGTTCACTCAGGGTTAGATGTATTTGCTCACAATATTGAGACTGTGAAACGGC
TTCAAAGAATTGTTAGAGATCCTCGAGCTGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGTGGATTGGTCTTAACAAGTGTAGATTGTGATGATATTCATAATGGAGGAAGTGGGTATTTTGCTCAAACAGTTAAAGCAATGAAGGAACTTAAGCCCGAGAT
AATGGTTGAATGCTTAACTTCTGATTTCCGAGGTGACTTAAAGGCTGTGGAGACTCTTGTTCACTCAGGGTTAGATGTATTTGCTCACAATATTGAGACTGTGAAACGGC
TTCAAAGAATTGTTAGAGATCCTCGAGCTGGGTAA
Protein sequenceShow/hide protein sequence
MVGGLVLTSVDCDDIHNGGSGYFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG