| GenBank top hits | e value | %identity | Alignment |
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| KYP30916.1 Retrovirus-related Pol polyprotein from transposon 17.6, partial [Cajanus cajan] | 6.3e-63 | 71.25 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CI+VFMDDFTVYG SFDACL SL+ +LNRCIETNLVLN+EKCHFMV GIVLGH++SSKGI+VD AK+ VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRF+K FSK ALPL+NLLQKDV F+ DD CK+AFD LK+ L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| KYP35881.1 Transposon Ty3-G Gag-Pol polyprotein, partial [Cajanus cajan] | 3.1e-62 | 70.62 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CI++FMDDFTVYG SFDACL SL+ LNRCIETNLVLN+EKCHFMV GIVLGH++SSKGI+VD AK+ VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRF+K FSK ALPL+NLLQKDV F+ DD CK+AFD LK+ L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| KYP44321.1 Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan] | 1.5e-61 | 70 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CI+VFMDDFTVYG SFDACL SL+ +LNRCIETNLVLN+EKCHFMV GIVLG+++SSKGI+VD AK+ VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRF++ FSK ALPL+NLLQKDV F+ DD CK+AFD LK+ L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| KYP55026.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus cajan] | 2.0e-61 | 71.25 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CIKVFMDDFTVYG SFDACL SL+ +LNRCIETNLVLN+EKCHFMV GIVLGH++SS+GI+VD AKI VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRFIK FSK ALPL++LLQKD+ F DD CK+AFD LK L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| XP_020202854.1 uncharacterized protein LOC109788523, partial [Cajanus cajan] | 2.6e-61 | 69.38 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CI+VFMDDFTV G SFDACL SL+ +LNRCIETNL+LN+EKCHFMV GI+LGH++SSKGI+VD AK+ VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRF+K FSK ALPL+NLLQKDV F+ DD CK+AFD LK+ L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151QKV4 Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) | 3.0e-63 | 71.25 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CI+VFMDDFTVYG SFDACL SL+ +LNRCIETNLVLN+EKCHFMV GIVLGH++SSKGI+VD AK+ VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRF+K FSK ALPL+NLLQKDV F+ DD CK+AFD LK+ L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| A0A151QZW2 Transposon Ty3-G Gag-Pol polyprotein (Fragment) | 1.5e-62 | 70.62 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CI++FMDDFTVYG SFDACL SL+ LNRCIETNLVLN+EKCHFMV GIVLGH++SSKGI+VD AK+ VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRF+K FSK ALPL+NLLQKDV F+ DD CK+AFD LK+ L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| A0A151RB09 Transposon Ty3-G Gag-Pol polyprotein | 1.3e-61 | 69.38 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CI+VFMDDFTV G SFDACL SL+ +LNRCIETNL+LN+EKCHFMV GI+LGH++SSKGI+VD AK+ VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRF+K FSK ALPL+NLLQKDV F+ DD CK+AFD LK+ L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| A0A151RP23 Transposon Ty3-G Gag-Pol polyprotein | 7.5e-62 | 70 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CI+VFMDDFTVYG SFDACL SL+ +LNRCIETNLVLN+EKCHFMV GIVLG+++SSKGI+VD AK+ VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRF++ FSK ALPL+NLLQKDV F+ DD CK+AFD LK+ L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| A0A151SJM9 Retrovirus-related Pol polyprotein from transposon 17.6 | 9.7e-62 | 71.25 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M+SIFSDF+E CIKVFMDDFTVYG SFDACL SL+ +LNRCIETNLVLN+EKCHFMV GIVLGH++SS+GI+VD AKI VI +L YP+C+++VRSFLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
GFYRRFIK FSK ALPL++LLQKD+ F DD CK+AFD LK L +TPI+Q+P+W +PF
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 7.3e-22 | 35.4 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M I + K V++DD V+ S D L SL L+ + + NL L +KC F+ LGH+++ GIK + KI+ IQK PT K++++FLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPF-LIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
G+YR+FI F+ IA P+T L+K++ + AF LK + PIL+ P++ F
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPF-LIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 1.2e-21 | 38.51 | Show/hide |
Query: MMSI-FSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLG
MM+I FS ++MDD V G S L +L + +C E NL L+ EKC F + LGH + KGI D K DVIQ P R F+
Subjt: MMSI-FSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLG
Query: TVGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
+YRRFIK F+ + +T L +K+VPF D C+KAF LK +L++ +LQ P+++ F
Subjt: TVGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 3.5e-16 | 30.77 | Show/hide |
Query: IFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGTVGF
+ + I K V++DD ++ ++ + ++ +L I+ N+ ++ EK F LG +VS G K D K+ IQ+ P C+ VRSFLG +
Subjt: IFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGTVGF
Query: YRRFIKAFSKIALPLTNLLQ-----------KDVPFLIDDNCKKAFDDLKQRLVSTP-ILQSPNWNLPF
YR FIK F+ IA P+T++L+ K +P ++ + AF L+ L S IL+ P++ PF
Subjt: YRRFIKAFSKIALPLTNLLQ-----------KDVPFLIDDNCKKAFDDLKQRLVSTP-ILQSPNWNLPF
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.3e-20 | 33.54 | Show/hide |
Query: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
M +I + K V++DD ++ S L S++L+ + + NL L +KC F+ LGH+V+ GIK + K+ I PT K++R+FLG
Subjt: MMSIFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGT
Query: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCK----KAFDDLKQRLVSTPILQSPNWNLPF
G+YR+FI ++ IA P+T+ L+K D K +AF+ LK ++ PILQ P++ F
Subjt: VGFYRRFIKAFSKIALPLTNLLQKDVPFLIDDNCK----KAFDDLKQRLVSTPILQSPNWNLPF
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.3e-23 | 34.52 | Show/hide |
Query: IFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGTVGF
I + I K V++DD V+ + +D +L L+L + NL +N EK HF+ + LG++V++ GIK D K+ I ++ PT +K+++ FLG +
Subjt: IFSDFIEKCIKVFMDDFTVYGDSFDACLASLELILNRCIETNLVLNYEKCHFMVSHGIVLGHLVSSKGIKVDKAKIDVIQKLSYPTCLKDVRSFLGTVGF
Query: YRRFIKAFSKIALPLTNLLQ-----------KDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
YR+FI+ ++K+A PLTNL + VP +D+ ++F+DLK L S+ IL P + PF
Subjt: YRRFIKAFSKIALPLTNLLQ-----------KDVPFLIDDNCKKAFDDLKQRLVSTPILQSPNWNLPF
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