; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc12g0325031 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc12g0325031
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSWIM-type domain-containing protein
Genome locationCMiso1.1chr12:14943802..14944540
RNA-Seq ExpressionCmc12g0325031
SyntenyCmc12g0325031
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032265.1 MuDRA-like transposase [Cucumis melo var. makuwa]4.9e-10893.75Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVAS LEAIREFLQRWFYERRKA SCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVD GKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDL++IPC HALIVI SLNLNPYAFV  YYYATVLFATY GLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSK+ KCSRCKR GHNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

KAA0042333.1 uncharacterized protein E6C27_scaffold795G00290 [Cucumis melo var. makuwa]2.4e-11599.52Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPS GEVSKSSKCSRCKRAGHNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]9.8e-10994.71Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKA SCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVD GKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDLE+I C HALIVIRSLNLNPYAFVS YYYATVL ATYGGLVR IGNHTDWSVVEVNDNILPP+FRRP GRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTC FEPI
Subjt:  RTCRFEPI

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]2.3e-11096.15Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKA SCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVD GKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDLE+IPC HALIVIRSLNLNPYAFVS YYYATVL ATYGGLVRPIGNHTDWSVV VNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRA HNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

TYK03234.1 uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]3.6e-11196.63Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKA SCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVD GKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDLE+IPC HALIVIRSLNLNPYAFVS YYYATVL ATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKR GHNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

TrEMBL top hitse value%identityAlignment
A0A5A7SST5 MuDRA-like transposase2.4e-10893.75Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVAS LEAIREFLQRWFYERRKA SCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVD GKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDL++IPC HALIVI SLNLNPYAFV  YYYATVLFATY GLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSK+ KCSRCKR GHNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

A0A5A7TGH6 SWIM-type domain-containing protein1.2e-11599.52Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPS GEVSKSSKCSRCKRAGHNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

A0A5A7V6N4 SWIM-type domain-containing protein4.7e-10994.71Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKA SCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVD GKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDLE+I C HALIVIRSLNLNPYAFVS YYYATVL ATYGGLVR IGNHTDWSVVEVNDNILPP+FRRP GRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTC FEPI
Subjt:  RTCRFEPI

A0A5D3BD68 SWIM-type domain-containing protein1.1e-11096.15Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKA SCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVD GKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDLE+IPC HALIVIRSLNLNPYAFVS YYYATVL ATYGGLVRPIGNHTDWSVV VNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRA HNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

A0A5D3BVP4 SWIM-type domain-containing protein1.7e-11196.63Show/hide
Query:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF
        MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKA SCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVD GKNFLVKLNCNSCSCLF
Subjt:  MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLF

Query:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI
        WDLE+IPC HALIVIRSLNLNPYAFVS YYYATVL ATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKR GHNI
Subjt:  WDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNI

Query:  RTCRFEPI
        RTCRFEPI
Subjt:  RTCRFEPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase1.2e-0630.49Show/hide
Query:  LVKLNCNSCSCLFWDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRP
        +V+LN  +C+C  +   K PC+HAL V   L +NP  +V   Y       TY     P+   + W        ++PPV   P
Subjt:  LVKLNCNSCSCLFWDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRP

AT1G64255.1 MuDR family transposase1.2e-0830.88Show/hide
Query:  KAVSCLKSVLSS---WAEGLIRKLVD-----ESRSFIVNPVSEVEFQV---VDEGKNFLVKLNCNSCSCLFWDLEKIPCVHALIVIRSLNLNPYAFVSHY
        K+ SC +S L+    + E ++ KL +      + S+IV P+    FQV   +D+G+  +V+L+  SC+C  +   K PC+HAL V + L  NP  +V   
Subjt:  KAVSCLKSVLSS---WAEGLIRKLVD-----ESRSFIVNPVSEVEFQV---VDEGKNFLVKLNCNSCSCLFWDLEKIPCVHALIVIRSLNLNPYAFVSHY

Query:  YYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPV
        Y    L  TY  +   +   + W        +LPPV
Subjt:  YYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPV

AT1G64260.1 MuDR family transposase1.0e-0725.42Show/hide
Query:  LKSVLSSWAEGLI---------RKLVDESRSFIVNPVSEVEFQVVD--EGKNFLVKLNCNSCSCLFWDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATV
        L S+ SS   G++          + + +S  +++  +    F+V +  E + ++V+LN ++C+C  +   K PC+HAL V   L +NP  +V   Y    
Subjt:  LKSVLSSWAEGLI---------RKLVDESRSFIVNPVSEVEFQVVD--EGKNFLVKLNCNSCSCLFWDLEKIPCVHALIVIRSLNLNPYAFVSHYYYATV

Query:  LFATYGGLVRPIGNHTDW
           TY     P+ +   W
Subjt:  LFATYGGLVRPIGNHTDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACGAATATTTGTGAAAGCTTGAATTCTAAGTTGAAGATTGATAGAGACTTACCGGTTGCATCCTTGCTTGAGGCCATTAGAGAGTTTCTTCAACGGTGGTTTTA
TGAGAGAAGAAAAGCAGTCTCATGTTTAAAGAGTGTTTTGAGTTCTTGGGCTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGCTTCATTGTGAATCCTGTGA
GTGAAGTTGAATTTCAAGTAGTTGATGAAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAGTTGCCTTTTTTGGGATCTAGAAAAAATTCCATGTGTTCAT
GCTCTTATTGTCATTCGTAGTCTTAATTTGAATCCTTATGCATTCGTTTCACATTATTACTATGCTACTGTATTGTTTGCAACTTATGGTGGTTTAGTTCGTCCGATTGG
TAACCATACTGATTGGAGTGTTGTAGAGGTGAACGACAATATATTGCCTCCAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAGGATTCCTTCTATTGGTGAAG
TTTCAAAGAGCTCAAAATGTAGTCGTTGTAAGAGAGCCGGTCATAATATTAGAACTTGTAGATTTGAACCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACGAATATTTGTGAAAGCTTGAATTCTAAGTTGAAGATTGATAGAGACTTACCGGTTGCATCCTTGCTTGAGGCCATTAGAGAGTTTCTTCAACGGTGGTTTTA
TGAGAGAAGAAAAGCAGTCTCATGTTTAAAGAGTGTTTTGAGTTCTTGGGCTGAAGGACTAATAAGAAAGCTAGTTGATGAATCAAGAAGCTTCATTGTGAATCCTGTGA
GTGAAGTTGAATTTCAAGTAGTTGATGAAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTGCAGTTGCCTTTTTTGGGATCTAGAAAAAATTCCATGTGTTCAT
GCTCTTATTGTCATTCGTAGTCTTAATTTGAATCCTTATGCATTCGTTTCACATTATTACTATGCTACTGTATTGTTTGCAACTTATGGTGGTTTAGTTCGTCCGATTGG
TAACCATACTGATTGGAGTGTTGTAGAGGTGAACGACAATATATTGCCTCCAGTATTTAGACGTCCAGCAGGAAGGCCTCGAAAAAGAAGGATTCCTTCTATTGGTGAAG
TTTCAAAGAGCTCAAAATGTAGTCGTTGTAAGAGAGCCGGTCATAATATTAGAACTTGTAGATTTGAACCTATTTGA
Protein sequenceShow/hide protein sequence
MTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAVSCLKSVLSSWAEGLIRKLVDESRSFIVNPVSEVEFQVVDEGKNFLVKLNCNSCSCLFWDLEKIPCVH
ALIVIRSLNLNPYAFVSHYYYATVLFATYGGLVRPIGNHTDWSVVEVNDNILPPVFRRPAGRPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCRFEPI